data_3TOH
#
_model_server_result.job_id            85ei3Bt90GOGgtYWXtByRQ 
_model_server_result.datetime_utc      '2024-11-13 05:43:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3toh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":101}' 
#
_entry.id    3TOH 
#
_exptl.entry_id    3TOH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3TOH 
_cell.length_a            51.268 
_cell.length_b            58.377 
_cell.length_c            61.3 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TOH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 163 n n 
S C1 DMS sing 164 n n 
S C2 DMS sing 165 n n 
C1 H11 DMS sing 166 n n 
C1 H12 DMS sing 167 n n 
C1 H13 DMS sing 168 n n 
C2 H21 DMS sing 169 n n 
C2 H22 DMS sing 170 n n 
C2 H23 DMS sing 171 n n 
#
_atom_sites.entry_id                     3TOH 
_atom_sites.fract_transf_matrix[1][1]    0.019505 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01713 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016313 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 079 A 1 100 1 079 EPR . 
D 3 DMS A 1 101 2 DMS DMS . 
E 3 DMS A 1 102 3 DMS DMS . 
F 3 DMS B 1 100 1 DMS DMS . 
G 4 HOH A 1 201 103 HOH HOH . 
G 4 HOH A 2 202 104 HOH HOH . 
G 4 HOH A 3 203 105 HOH HOH . 
G 4 HOH A 4 204 106 HOH HOH . 
G 4 HOH A 5 205 107 HOH HOH . 
G 4 HOH A 6 206 108 HOH HOH . 
G 4 HOH A 7 207 109 HOH HOH . 
G 4 HOH A 8 208 110 HOH HOH . 
G 4 HOH A 9 209 111 HOH HOH . 
G 4 HOH A 10 210 112 HOH HOH . 
G 4 HOH A 11 211 2 HOH HOH . 
G 4 HOH A 12 212 3 HOH HOH . 
G 4 HOH A 13 213 5 HOH HOH . 
G 4 HOH A 14 214 6 HOH HOH . 
G 4 HOH A 15 215 117 HOH HOH . 
G 4 HOH A 16 216 8 HOH HOH . 
G 4 HOH A 17 217 12 HOH HOH . 
G 4 HOH A 18 218 17 HOH HOH . 
G 4 HOH A 19 219 121 HOH HOH . 
G 4 HOH A 20 220 18 HOH HOH . 
G 4 HOH A 21 221 20 HOH HOH . 
G 4 HOH A 22 222 124 HOH HOH . 
G 4 HOH A 23 223 125 HOH HOH . 
G 4 HOH A 24 224 126 HOH HOH . 
G 4 HOH A 25 225 21 HOH HOH . 
G 4 HOH A 26 226 23 HOH HOH . 
G 4 HOH A 27 227 26 HOH HOH . 
G 4 HOH A 28 228 28 HOH HOH . 
G 4 HOH A 29 229 131 HOH HOH . 
G 4 HOH A 30 230 34 HOH HOH . 
G 4 HOH A 31 231 133 HOH HOH . 
G 4 HOH A 32 232 35 HOH HOH . 
G 4 HOH A 33 233 36 HOH HOH . 
G 4 HOH A 34 234 38 HOH HOH . 
G 4 HOH A 35 235 42 HOH HOH . 
G 4 HOH A 36 236 138 HOH HOH . 
G 4 HOH A 37 237 43 HOH HOH . 
G 4 HOH A 38 238 44 HOH HOH . 
G 4 HOH A 39 239 45 HOH HOH . 
G 4 HOH A 40 240 49 HOH HOH . 
G 4 HOH A 41 241 50 HOH HOH . 
G 4 HOH A 42 242 51 HOH HOH . 
G 4 HOH A 43 243 54 HOH HOH . 
G 4 HOH A 44 244 56 HOH HOH . 
G 4 HOH A 45 245 57 HOH HOH . 
G 4 HOH A 46 246 62 HOH HOH . 
G 4 HOH A 47 247 149 HOH HOH . 
G 4 HOH A 48 248 65 HOH HOH . 
G 4 HOH A 49 249 66 HOH HOH . 
G 4 HOH A 50 250 67 HOH HOH . 
G 4 HOH A 51 251 69 HOH HOH . 
G 4 HOH A 52 252 71 HOH HOH . 
G 4 HOH A 53 253 74 HOH HOH . 
G 4 HOH A 54 254 78 HOH HOH . 
G 4 HOH A 55 255 158 HOH HOH . 
G 4 HOH A 56 256 79 HOH HOH . 
G 4 HOH A 57 257 80 HOH HOH . 
G 4 HOH A 58 258 81 HOH HOH . 
G 4 HOH A 59 259 83 HOH HOH . 
G 4 HOH A 60 260 84 HOH HOH . 
G 4 HOH A 61 261 85 HOH HOH . 
G 4 HOH A 62 262 165 HOH HOH . 
G 4 HOH A 63 263 166 HOH HOH . 
G 4 HOH A 64 264 167 HOH HOH . 
G 4 HOH A 65 265 168 HOH HOH . 
G 4 HOH A 66 266 86 HOH HOH . 
G 4 HOH A 67 267 87 HOH HOH . 
G 4 HOH A 68 268 171 HOH HOH . 
G 4 HOH A 69 269 88 HOH HOH . 
G 4 HOH A 70 270 89 HOH HOH . 
G 4 HOH A 71 271 174 HOH HOH . 
G 4 HOH A 72 272 93 HOH HOH . 
G 4 HOH A 73 273 96 HOH HOH . 
G 4 HOH A 74 274 177 HOH HOH . 
G 4 HOH A 75 275 99 HOH HOH . 
G 4 HOH A 76 276 102 HOH HOH . 
G 4 HOH A 77 277 181 HOH HOH . 
G 4 HOH A 78 278 206 HOH HOH . 
G 4 HOH A 79 279 214 HOH HOH . 
G 4 HOH A 80 280 215 HOH HOH . 
G 4 HOH A 81 281 216 HOH HOH . 
G 4 HOH A 82 282 218 HOH HOH . 
G 4 HOH A 83 283 221 HOH HOH . 
G 4 HOH A 84 284 222 HOH HOH . 
G 4 HOH A 85 285 223 HOH HOH . 
G 4 HOH A 86 286 224 HOH HOH . 
G 4 HOH A 87 287 225 HOH HOH . 
G 4 HOH A 88 288 230 HOH HOH . 
G 4 HOH A 89 289 233 HOH HOH . 
G 4 HOH A 90 290 234 HOH HOH . 
G 4 HOH A 91 291 236 HOH HOH . 
G 4 HOH A 92 292 238 HOH HOH . 
G 4 HOH A 93 293 239 HOH HOH . 
G 4 HOH A 94 294 241 HOH HOH . 
G 4 HOH A 95 295 153 HOH HOH . 
H 4 HOH B 1 201 1 HOH HOH . 
H 4 HOH B 2 202 7 HOH HOH . 
H 4 HOH B 3 203 9 HOH HOH . 
H 4 HOH B 4 204 10 HOH HOH . 
H 4 HOH B 5 205 11 HOH HOH . 
H 4 HOH B 6 206 13 HOH HOH . 
H 4 HOH B 7 207 14 HOH HOH . 
H 4 HOH B 8 208 15 HOH HOH . 
H 4 HOH B 9 209 16 HOH HOH . 
H 4 HOH B 10 210 22 HOH HOH . 
H 4 HOH B 11 211 24 HOH HOH . 
H 4 HOH B 12 212 25 HOH HOH . 
H 4 HOH B 13 213 113 HOH HOH . 
H 4 HOH B 14 214 114 HOH HOH . 
H 4 HOH B 15 215 27 HOH HOH . 
H 4 HOH B 16 216 29 HOH HOH . 
H 4 HOH B 17 217 30 HOH HOH . 
H 4 HOH B 18 218 31 HOH HOH . 
H 4 HOH B 19 219 119 HOH HOH . 
H 4 HOH B 20 220 120 HOH HOH . 
H 4 HOH B 21 221 32 HOH HOH . 
H 4 HOH B 22 222 122 HOH HOH . 
H 4 HOH B 23 223 33 HOH HOH . 
H 4 HOH B 24 224 37 HOH HOH . 
H 4 HOH B 25 225 39 HOH HOH . 
H 4 HOH B 26 226 40 HOH HOH . 
H 4 HOH B 27 227 127 HOH HOH . 
H 4 HOH B 28 228 41 HOH HOH . 
H 4 HOH B 29 229 129 HOH HOH . 
H 4 HOH B 30 230 46 HOH HOH . 
H 4 HOH B 31 231 47 HOH HOH . 
H 4 HOH B 32 232 48 HOH HOH . 
H 4 HOH B 33 233 52 HOH HOH . 
H 4 HOH B 34 234 53 HOH HOH . 
H 4 HOH B 35 235 135 HOH HOH . 
H 4 HOH B 36 236 136 HOH HOH . 
H 4 HOH B 37 237 55 HOH HOH . 
H 4 HOH B 38 238 58 HOH HOH . 
H 4 HOH B 39 239 59 HOH HOH . 
H 4 HOH B 40 240 140 HOH HOH . 
H 4 HOH B 41 241 141 HOH HOH . 
H 4 HOH B 42 242 60 HOH HOH . 
H 4 HOH B 43 243 143 HOH HOH . 
H 4 HOH B 44 244 144 HOH HOH . 
H 4 HOH B 45 245 61 HOH HOH . 
H 4 HOH B 46 246 146 HOH HOH . 
H 4 HOH B 47 247 63 HOH HOH . 
H 4 HOH B 48 248 148 HOH HOH . 
H 4 HOH B 49 249 68 HOH HOH . 
H 4 HOH B 50 250 70 HOH HOH . 
H 4 HOH B 51 251 151 HOH HOH . 
H 4 HOH B 52 252 72 HOH HOH . 
H 4 HOH B 53 253 75 HOH HOH . 
H 4 HOH B 54 254 155 HOH HOH . 
H 4 HOH B 55 255 156 HOH HOH . 
H 4 HOH B 56 256 76 HOH HOH . 
H 4 HOH B 57 257 82 HOH HOH . 
H 4 HOH B 58 258 90 HOH HOH . 
H 4 HOH B 59 259 160 HOH HOH . 
H 4 HOH B 60 260 91 HOH HOH . 
H 4 HOH B 61 261 92 HOH HOH . 
H 4 HOH B 62 262 163 HOH HOH . 
H 4 HOH B 63 263 94 HOH HOH . 
H 4 HOH B 64 264 95 HOH HOH . 
H 4 HOH B 65 265 98 HOH HOH . 
H 4 HOH B 66 266 100 HOH HOH . 
H 4 HOH B 67 267 73 HOH HOH . 
H 4 HOH B 68 268 173 HOH HOH . 
H 4 HOH B 69 269 175 HOH HOH . 
H 4 HOH B 70 270 176 HOH HOH . 
H 4 HOH B 71 271 178 HOH HOH . 
H 4 HOH B 72 272 183 HOH HOH . 
H 4 HOH B 73 273 193 HOH HOH . 
H 4 HOH B 74 274 203 HOH HOH . 
H 4 HOH B 75 275 213 HOH HOH . 
H 4 HOH B 76 276 217 HOH HOH . 
H 4 HOH B 77 277 219 HOH HOH . 
H 4 HOH B 78 278 226 HOH HOH . 
H 4 HOH B 79 279 231 HOH HOH . 
H 4 HOH B 80 280 232 HOH HOH . 
H 4 HOH B 81 281 235 HOH HOH . 
H 4 HOH B 82 282 237 HOH HOH . 
H 4 HOH B 83 283 240 HOH HOH . 
H 4 HOH B 84 284 242 HOH HOH . 
H 4 HOH B 85 285 243 HOH HOH . 
H 4 HOH B 86 286 244 HOH HOH . 
H 4 HOH B 87 287 245 HOH HOH . 
H 4 HOH B 88 288 246 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 3 -2.081 25.914 21.709 0.5 11.43 ? S DMS 101 A 1 
HETATM 2 O O DMS . . . D 3 -2.913 24.825 20.63 0.5 9.97 ? O DMS 101 A 1 
HETATM 3 C C1 DMS . . . D 3 -3.419 26.727 22.622 0.5 11.13 ? C1 DMS 101 A 1 
HETATM 4 C C2 DMS . . . D 3 -1.329 24.846 22.97 0.5 8.89 ? C2 DMS 101 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#