data_3TPI
#
_model_server_result.job_id            73_hQh_u-SAiX9yJAzX2GA 
_model_server_result.datetime_utc      '2024-11-23 02:19:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3tpi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1016}' 
#
_entry.id    3TPI 
#
_exptl.entry_id    3TPI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              131.173 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ISOLEUCINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3TPI 
_cell.length_a            75.5 
_cell.length_b            84.4 
_cell.length_c            122.9 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TPI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA octameric 8 software_defined_assembly 2 
PISA tetrameric 4 software_defined_assembly 3 
PISA dimeric 2 software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I 1 1 
A,B,C,D,E,F,G,H,I 2 1,2,3,4 
A,B,C,D,E,F,G,H,I 3 1,2 
B,F,G,I 4 1 
A,C,D,E,H 4 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_575 -x,-y+2,z -1 0 0 0 -1 0 0 0 1 0 168.8 0 
3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
4 'crystal symmetry operation' 4_575 x,-y+2,-z 1 0 0 0 -1 0 0 0 -1 0 168.8 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 13 Z CYS 22 1_555 A SG CYS 143 Z CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? 
disulf ? disulf2 A SG CYS 31 Z CYS 42 1_555 A SG CYS 47 Z CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf3 A SG CYS 115 Z CYS 128 1_555 A SG CYS 216 Z CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
disulf ? disulf4 A SG CYS 122 Z CYS 136 1_555 A SG CYS 189 Z CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
disulf ? disulf5 A SG CYS 154 Z CYS 168 1_555 A SG CYS 168 Z CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
disulf ? disulf6 A SG CYS 179 Z CYS 191 1_555 A SG CYS 203 Z CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
disulf ? disulf7 B SG CYS 5 I CYS 5 1_555 B SG CYS 55 I CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? 
disulf ? disulf8 B SG CYS 14 I CYS 14 1_555 B SG CYS 38 I CYS 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? 
disulf ? disulf9 B SG CYS 30 I CYS 30 1_555 B SG CYS 51 I CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
covale ? covale1 C C ILE . Z ILE 1016 1_555 D N VAL . Z VAL 1017 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? 
metalc ? metalc1 A OE2 GLU 58 Z GLU 70 1_555 E CA CA . Z CA 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? 
metalc ? metalc2 A O ASN 60 Z ASN 72 1_555 E CA CA . Z CA 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc3 A O VAL 63 Z VAL 75 1_555 E CA CA . Z CA 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc4 A OE2 GLU 68 Z GLU 80 1_555 E CA CA . Z CA 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc5 E CA CA . Z CA 462 1_555 H O HOH . Z HOH 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? 
metalc ? metalc6 E CA CA . Z CA 462 1_555 H O HOH . Z HOH 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
#
_chem_comp.formula           'C6 H13 N O2' 
_chem_comp.formula_weight    131.173 
_chem_comp.id                ILE 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              ISOLEUCINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA ILE sing 152 n n 
N H ILE sing 153 n n 
N H2 ILE sing 154 n n 
CA C ILE sing 155 n n 
CA CB ILE sing 156 n n 
CA HA ILE sing 157 n n 
C O ILE doub 158 n n 
C OXT ILE sing 159 n n 
CB CG1 ILE sing 160 n n 
CB CG2 ILE sing 161 n n 
CB HB ILE sing 162 n n 
CG1 CD1 ILE sing 163 n n 
CG1 HG12 ILE sing 164 n n 
CG1 HG13 ILE sing 165 n n 
CG2 HG21 ILE sing 166 n n 
CG2 HG22 ILE sing 167 n n 
CG2 HG23 ILE sing 168 n n 
CD1 HD11 ILE sing 169 n n 
CD1 HD12 ILE sing 170 n n 
CD1 HD13 ILE sing 171 n n 
OXT HXT ILE sing 172 n n 
#
_atom_sites.entry_id                     3TPI 
_atom_sites.fract_transf_matrix[1][1]    0.013245 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011848 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008137 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ILE Z 1 1016 1016 ILE ILE . 
D 4 VAL Z 1 1017 1017 VAL VAL . 
E 5 CA Z 1 462 462 CA CA . 
F 6 SO4 I 1 59 59 SO4 SO4 . 
G 6 SO4 I 1 60 60 SO4 SO4 . 
H 7 HOH Z 1 401 401 HOH HOH . 
H 7 HOH Z 2 402 402 HOH HOH . 
H 7 HOH Z 3 403 403 HOH HOH . 
H 7 HOH Z 4 405 405 HOH HOH . 
H 7 HOH Z 5 406 406 HOH HOH . 
H 7 HOH Z 6 407 407 HOH HOH . 
H 7 HOH Z 7 408 408 HOH HOH . 
H 7 HOH Z 8 409 409 HOH HOH . 
H 7 HOH Z 9 410 410 HOH HOH . 
H 7 HOH Z 10 411 411 HOH HOH . 
H 7 HOH Z 11 412 412 HOH HOH . 
H 7 HOH Z 12 414 414 HOH HOH . 
H 7 HOH Z 13 415 415 HOH HOH . 
H 7 HOH Z 14 422 422 HOH HOH . 
H 7 HOH Z 15 426 426 HOH HOH . 
H 7 HOH Z 16 429 429 HOH HOH . 
H 7 HOH Z 17 430 430 HOH HOH . 
H 7 HOH Z 18 431 431 HOH HOH . 
H 7 HOH Z 19 434 434 HOH HOH . 
H 7 HOH Z 20 435 435 HOH HOH . 
H 7 HOH Z 21 436 436 HOH HOH . 
H 7 HOH Z 22 437 437 HOH HOH . 
H 7 HOH Z 23 438 438 HOH HOH . 
H 7 HOH Z 24 439 439 HOH HOH . 
H 7 HOH Z 25 445 445 HOH HOH . 
H 7 HOH Z 26 447 447 HOH HOH . 
H 7 HOH Z 27 448 448 HOH HOH . 
H 7 HOH Z 28 456 456 HOH HOH . 
H 7 HOH Z 29 457 457 HOH HOH . 
H 7 HOH Z 30 463 463 HOH HOH . 
H 7 HOH Z 31 465 465 HOH HOH . 
H 7 HOH Z 32 466 466 HOH HOH . 
H 7 HOH Z 33 469 469 HOH HOH . 
H 7 HOH Z 34 470 470 HOH HOH . 
H 7 HOH Z 35 473 473 HOH HOH . 
H 7 HOH Z 36 475 475 HOH HOH . 
H 7 HOH Z 37 476 476 HOH HOH . 
H 7 HOH Z 38 477 477 HOH HOH . 
H 7 HOH Z 39 479 479 HOH HOH . 
H 7 HOH Z 40 481 481 HOH HOH . 
H 7 HOH Z 41 483 483 HOH HOH . 
H 7 HOH Z 42 487 487 HOH HOH . 
H 7 HOH Z 43 489 489 HOH HOH . 
H 7 HOH Z 44 491 491 HOH HOH . 
H 7 HOH Z 45 495 495 HOH HOH . 
H 7 HOH Z 46 498 498 HOH HOH . 
H 7 HOH Z 47 499 499 HOH HOH . 
H 7 HOH Z 48 502 502 HOH HOH . 
H 7 HOH Z 49 514 514 HOH HOH . 
H 7 HOH Z 50 516 516 HOH HOH . 
H 7 HOH Z 51 519 519 HOH HOH . 
H 7 HOH Z 52 520 520 HOH HOH . 
H 7 HOH Z 53 522 522 HOH HOH . 
H 7 HOH Z 54 523 523 HOH HOH . 
H 7 HOH Z 55 524 524 HOH HOH . 
H 7 HOH Z 56 526 526 HOH HOH . 
H 7 HOH Z 57 527 527 HOH HOH . 
H 7 HOH Z 58 528 528 HOH HOH . 
H 7 HOH Z 59 529 529 HOH HOH . 
H 7 HOH Z 60 530 530 HOH HOH . 
H 7 HOH Z 61 531 531 HOH HOH . 
H 7 HOH Z 62 534 534 HOH HOH . 
H 7 HOH Z 63 540 540 HOH HOH . 
H 7 HOH Z 64 541 541 HOH HOH . 
H 7 HOH Z 65 542 542 HOH HOH . 
H 7 HOH Z 66 543 543 HOH HOH . 
H 7 HOH Z 67 544 544 HOH HOH . 
H 7 HOH Z 68 547 547 HOH HOH . 
H 7 HOH Z 69 549 549 HOH HOH . 
H 7 HOH Z 70 550 550 HOH HOH . 
H 7 HOH Z 71 551 551 HOH HOH . 
H 7 HOH Z 72 552 552 HOH HOH . 
H 7 HOH Z 73 554 554 HOH HOH . 
H 7 HOH Z 74 555 555 HOH HOH . 
H 7 HOH Z 75 556 556 HOH HOH . 
H 7 HOH Z 76 559 559 HOH HOH . 
H 7 HOH Z 77 560 560 HOH HOH . 
H 7 HOH Z 78 561 561 HOH HOH . 
H 7 HOH Z 79 562 562 HOH HOH . 
H 7 HOH Z 80 563 563 HOH HOH . 
H 7 HOH Z 81 566 566 HOH HOH . 
H 7 HOH Z 82 570 570 HOH HOH . 
H 7 HOH Z 83 571 571 HOH HOH . 
H 7 HOH Z 84 572 572 HOH HOH . 
H 7 HOH Z 85 573 573 HOH HOH . 
H 7 HOH Z 86 574 574 HOH HOH . 
H 7 HOH Z 87 575 575 HOH HOH . 
H 7 HOH Z 88 576 576 HOH HOH . 
H 7 HOH Z 89 577 577 HOH HOH . 
H 7 HOH Z 90 582 582 HOH HOH . 
H 7 HOH Z 91 583 583 HOH HOH . 
H 7 HOH Z 92 585 585 HOH HOH . 
H 7 HOH Z 93 591 591 HOH HOH . 
H 7 HOH Z 94 592 592 HOH HOH . 
H 7 HOH Z 95 593 593 HOH HOH . 
H 7 HOH Z 96 594 594 HOH HOH . 
H 7 HOH Z 97 595 595 HOH HOH . 
H 7 HOH Z 98 597 597 HOH HOH . 
H 7 HOH Z 99 598 598 HOH HOH . 
H 7 HOH Z 100 599 599 HOH HOH . 
H 7 HOH Z 101 601 601 HOH HOH . 
H 7 HOH Z 102 602 602 HOH HOH . 
H 7 HOH Z 103 701 701 HOH HOH . 
H 7 HOH Z 104 702 702 HOH HOH . 
H 7 HOH Z 105 703 703 HOH HOH . 
H 7 HOH Z 106 704 704 HOH HOH . 
H 7 HOH Z 107 705 705 HOH HOH . 
H 7 HOH Z 108 706 706 HOH HOH . 
H 7 HOH Z 109 708 708 HOH HOH . 
H 7 HOH Z 110 709 709 HOH HOH . 
H 7 HOH Z 111 710 710 HOH HOH . 
H 7 HOH Z 112 711 711 HOH HOH . 
H 7 HOH Z 113 712 712 HOH HOH . 
H 7 HOH Z 114 713 713 HOH HOH . 
H 7 HOH Z 115 714 714 HOH HOH . 
H 7 HOH Z 116 715 715 HOH HOH . 
I 7 HOH I 1 400 400 HOH HOH . 
I 7 HOH I 2 404 404 HOH HOH . 
I 7 HOH I 3 413 413 HOH HOH . 
I 7 HOH I 4 416 416 HOH HOH . 
I 7 HOH I 5 417 417 HOH HOH . 
I 7 HOH I 6 419 419 HOH HOH . 
I 7 HOH I 7 421 421 HOH HOH . 
I 7 HOH I 8 423 423 HOH HOH . 
I 7 HOH I 9 425 425 HOH HOH . 
I 7 HOH I 10 450 450 HOH HOH . 
I 7 HOH I 11 455 455 HOH HOH . 
I 7 HOH I 12 501 501 HOH HOH . 
I 7 HOH I 13 503 503 HOH HOH . 
I 7 HOH I 14 505 505 HOH HOH . 
I 7 HOH I 15 507 507 HOH HOH . 
I 7 HOH I 16 508 508 HOH HOH . 
I 7 HOH I 17 511 511 HOH HOH . 
I 7 HOH I 18 512 512 HOH HOH . 
I 7 HOH I 19 515 515 HOH HOH . 
I 7 HOH I 20 532 532 HOH HOH . 
I 7 HOH I 21 533 533 HOH HOH . 
I 7 HOH I 22 536 536 HOH HOH . 
I 7 HOH I 23 537 537 HOH HOH . 
I 7 HOH I 24 538 538 HOH HOH . 
I 7 HOH I 25 564 564 HOH HOH . 
I 7 HOH I 26 565 565 HOH HOH . 
I 7 HOH I 27 568 568 HOH HOH . 
I 7 HOH I 28 569 569 HOH HOH . 
I 7 HOH I 29 587 587 HOH HOH . 
I 7 HOH I 30 588 588 HOH HOH . 
I 7 HOH I 31 589 589 HOH HOH . 
I 7 HOH I 32 590 590 HOH HOH . 
I 7 HOH I 33 600 600 HOH HOH . 
I 7 HOH I 34 603 603 HOH HOH . 
I 7 HOH I 35 700 700 HOH HOH . 
I 7 HOH I 36 707 707 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N ILE . . . C 3 18.821 65.85 12.695 1 25.98 ? N ILE 1016 Z 1 
HETATM 2 C CA ILE . . . C 3 19.718 64.973 13.477 1 25.98 ? CA ILE 1016 Z 1 
HETATM 3 C C ILE . . . C 3 21.106 64.975 12.812 1 25.98 ? C ILE 1016 Z 1 
HETATM 4 O O ILE . . . C 3 21.17 64.607 11.602 1 25.98 ? O ILE 1016 Z 1 
HETATM 5 C CB ILE . . . C 3 19.198 63.496 13.574 1 25.98 ? CB ILE 1016 Z 1 
HETATM 6 C CG1 ILE . . . C 3 17.794 63.302 14.254 1 20.29 ? CG1 ILE 1016 Z 1 
HETATM 7 C CG2 ILE . . . C 3 20.247 62.574 14.24 1 20.29 ? CG2 ILE 1016 Z 1 
HETATM 8 C CD1 ILE . . . C 3 17.897 63.49 15.785 1 20.29 ? CD1 ILE 1016 Z 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#