data_3TPS
#
_model_server_result.job_id            6KgoWK9HOwJ7v0BZlnmrFA 
_model_server_result.datetime_utc      '2024-11-23 07:47:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3tps 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":154}' 
#
_entry.id    3TPS 
#
_exptl.entry_id    3TPS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3TPS 
_cell.length_a            60.708 
_cell.length_b            60.708 
_cell.length_c            64.363 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TPS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        173 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_775 -y+2,x-y+2,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 60.708 105.14934 0 
3 'crystal symmetry operation' 3_575 -x+y,-x+2,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -60.708 105.14934 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C LEU 43 A LEU 43 1_555 A N CSO 44 A CSO 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale2 A C CSO 44 A CSO 44 1_555 A N SER 45 A SER 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
metalc ? metalc1 B MG MG . A MG 153 1_555 E O HOH . A HOH 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
metalc ? metalc2 B MG MG . A MG 153 1_555 E O HOH . A HOH 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc3 B MG MG . A MG 153 1_555 E O HOH . A HOH 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? 
metalc ? metalc4 B MG MG . A MG 153 1_555 C O2G DUP . A DUP 777 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
metalc ? metalc5 B MG MG . A MG 153 1_555 C O1A DUP . A DUP 777 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
metalc ? metalc6 B MG MG . A MG 153 1_555 C O1B DUP . A DUP 777 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 393 n n 
C C2 TRS sing 394 n n 
C C3 TRS sing 395 n n 
C N TRS sing 396 n n 
C1 O1 TRS sing 397 n n 
C1 H11 TRS sing 398 n n 
C1 H12 TRS sing 399 n n 
C2 O2 TRS sing 400 n n 
C2 H21 TRS sing 401 n n 
C2 H22 TRS sing 402 n n 
C3 O3 TRS sing 403 n n 
C3 H31 TRS sing 404 n n 
C3 H32 TRS sing 405 n n 
N HN1 TRS sing 406 n n 
N HN2 TRS sing 407 n n 
N HN3 TRS sing 408 n n 
O1 HO1 TRS sing 409 n n 
O2 HO2 TRS sing 410 n n 
O3 HO3 TRS sing 411 n n 
#
_atom_sites.entry_id                     3TPS 
_atom_sites.fract_transf_matrix[1][1]    0.016472 
_atom_sites.fract_transf_matrix[1][2]    0.00951 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019021 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015537 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 153 1 MG MG . 
C 3 DUP A 1 777 777 DUP DUP . 
D 4 TRS A 1 154 1 TRS TRS . 
E 5 HOH A 1 155 1 HOH HOH . 
E 5 HOH A 2 156 2 HOH HOH . 
E 5 HOH A 3 157 4 HOH HOH . 
E 5 HOH A 4 158 5 HOH HOH . 
E 5 HOH A 5 159 6 HOH HOH . 
E 5 HOH A 6 160 7 HOH HOH . 
E 5 HOH A 7 161 8 HOH HOH . 
E 5 HOH A 8 162 9 HOH HOH . 
E 5 HOH A 9 163 10 HOH HOH . 
E 5 HOH A 10 164 11 HOH HOH . 
E 5 HOH A 11 165 12 HOH HOH . 
E 5 HOH A 12 166 14 HOH HOH . 
E 5 HOH A 13 167 15 HOH HOH . 
E 5 HOH A 14 168 16 HOH HOH . 
E 5 HOH A 15 169 17 HOH HOH . 
E 5 HOH A 16 170 18 HOH HOH . 
E 5 HOH A 17 171 19 HOH HOH . 
E 5 HOH A 18 172 20 HOH HOH . 
E 5 HOH A 19 173 21 HOH HOH . 
E 5 HOH A 20 174 22 HOH HOH . 
E 5 HOH A 21 175 23 HOH HOH . 
E 5 HOH A 22 176 24 HOH HOH . 
E 5 HOH A 23 177 25 HOH HOH . 
E 5 HOH A 24 178 26 HOH HOH . 
E 5 HOH A 25 179 27 HOH HOH . 
E 5 HOH A 26 180 28 HOH HOH . 
E 5 HOH A 27 181 29 HOH HOH . 
E 5 HOH A 28 182 30 HOH HOH . 
E 5 HOH A 29 183 31 HOH HOH . 
E 5 HOH A 30 184 32 HOH HOH . 
E 5 HOH A 31 185 33 HOH HOH . 
E 5 HOH A 32 186 34 HOH HOH . 
E 5 HOH A 33 187 35 HOH HOH . 
E 5 HOH A 34 188 36 HOH HOH . 
E 5 HOH A 35 189 37 HOH HOH . 
E 5 HOH A 36 190 38 HOH HOH . 
E 5 HOH A 37 191 39 HOH HOH . 
E 5 HOH A 38 192 40 HOH HOH . 
E 5 HOH A 39 193 41 HOH HOH . 
E 5 HOH A 40 194 42 HOH HOH . 
E 5 HOH A 41 195 43 HOH HOH . 
E 5 HOH A 42 196 44 HOH HOH . 
E 5 HOH A 43 197 45 HOH HOH . 
E 5 HOH A 44 198 46 HOH HOH . 
E 5 HOH A 45 199 48 HOH HOH . 
E 5 HOH A 46 200 49 HOH HOH . 
E 5 HOH A 47 201 50 HOH HOH . 
E 5 HOH A 48 202 51 HOH HOH . 
E 5 HOH A 49 203 52 HOH HOH . 
E 5 HOH A 50 204 53 HOH HOH . 
E 5 HOH A 51 205 54 HOH HOH . 
E 5 HOH A 52 206 55 HOH HOH . 
E 5 HOH A 53 207 56 HOH HOH . 
E 5 HOH A 54 208 57 HOH HOH . 
E 5 HOH A 55 209 58 HOH HOH . 
E 5 HOH A 56 210 59 HOH HOH . 
E 5 HOH A 57 211 60 HOH HOH . 
E 5 HOH A 58 212 61 HOH HOH . 
E 5 HOH A 59 213 62 HOH HOH . 
E 5 HOH A 60 214 63 HOH HOH . 
E 5 HOH A 61 215 64 HOH HOH . 
E 5 HOH A 62 216 65 HOH HOH . 
E 5 HOH A 63 217 66 HOH HOH . 
E 5 HOH A 64 218 67 HOH HOH . 
E 5 HOH A 65 219 68 HOH HOH . 
E 5 HOH A 66 220 69 HOH HOH . 
E 5 HOH A 67 221 70 HOH HOH . 
E 5 HOH A 68 222 71 HOH HOH . 
E 5 HOH A 69 223 72 HOH HOH . 
E 5 HOH A 70 224 73 HOH HOH . 
E 5 HOH A 71 225 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . D 4 -0.02 70.085 25.011 0.2 22.93 ? C TRS 154 A 1 
HETATM 2 C C1 TRS . . . D 4 -0.427 71.5 24.614 0.2 23.21 ? C1 TRS 154 A 1 
HETATM 3 C C2 TRS . . . D 4 1.413 69.79 24.571 0.2 23.14 ? C2 TRS 154 A 1 
HETATM 4 C C3 TRS . . . D 4 -1.004 69.076 24.418 0.2 22.85 ? C3 TRS 154 A 1 
HETATM 5 N N TRS . . . D 4 -0.052 70.016 26.471 0.2 24.91 ? N TRS 154 A 1 
HETATM 6 O O1 TRS . . . D 4 0.653 72.373 24.344 0.2 23.05 ? O1 TRS 154 A 1 
HETATM 7 O O2 TRS . . . D 4 1.716 68.419 24.401 0.2 21.58 ? O2 TRS 154 A 1 
HETATM 8 O O3 TRS . . . D 4 -2.294 69.047 25.004 0.2 14.9 ? O3 TRS 154 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           8 
#