data_3TPT # _model_server_result.job_id l5nattn8g5Qg3x3tjZBmKg _model_server_result.datetime_utc '2024-10-10 11:18:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tpt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":441}' # _entry.id 3TPT # _exptl.entry_id 3TPT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.66 _cell.angle_gamma 90 _cell.entry_id 3TPT _cell.length_a 68.6 _cell.length_b 84.43 _cell.length_c 69.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TPT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,J 1 1 B,F,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 314 A ASN 314 1_555 D MG MG . A MG 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc2 D MG MG . A MG 441 1_555 C O2A ADP . A ADP 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc3 B OD1 ASN 314 B ASN 314 1_555 H MG MG . B MG 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc4 B OD1 ASP 332 B ASP 332 1_555 G MG MG . B MG 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? metalc ? metalc5 B OD2 ASP 332 B ASP 332 1_555 G MG MG . B MG 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? metalc ? metalc6 B OD2 ASP 332 B ASP 332 1_555 H MG MG . B MG 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc7 G MG MG . B MG 441 1_555 F O2B ADP . B ADP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc8 H MG MG . B MG 442 1_555 F O3B ADP . B ADP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc9 H MG MG . B MG 442 1_555 F O2A ADP . B ADP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc10 H MG MG . B MG 442 1_555 K O HOH . B HOH 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3TPT _atom_sites.fract_transf_matrix[1][1] 0.014577 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000422 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011844 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014368 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ADP A 1 500 500 ADP ADP . D 3 MG A 1 441 5 MG MG . E 4 SO4 A 1 833 833 SO4 SO4 . F 2 ADP B 1 501 501 ADP ADP . G 3 MG B 1 441 1 MG MG . H 3 MG B 1 442 5 MG MG . I 4 SO4 B 1 834 834 SO4 SO4 . J 5 HOH A 1 442 2 HOH TIP . J 5 HOH A 2 443 3 HOH TIP . J 5 HOH A 3 444 5 HOH TIP . J 5 HOH A 4 445 13 HOH TIP . J 5 HOH A 5 446 14 HOH TIP . J 5 HOH A 6 447 17 HOH TIP . J 5 HOH A 7 448 19 HOH TIP . J 5 HOH A 8 449 22 HOH TIP . J 5 HOH A 9 450 24 HOH TIP . J 5 HOH A 10 451 25 HOH TIP . J 5 HOH A 11 452 26 HOH TIP . J 5 HOH A 12 453 28 HOH TIP . J 5 HOH A 13 454 29 HOH TIP . J 5 HOH A 14 455 30 HOH TIP . J 5 HOH A 15 456 31 HOH TIP . J 5 HOH A 16 457 32 HOH TIP . J 5 HOH A 17 458 33 HOH TIP . J 5 HOH A 18 459 34 HOH TIP . J 5 HOH A 19 460 37 HOH TIP . J 5 HOH A 20 461 38 HOH TIP . J 5 HOH A 21 462 39 HOH TIP . J 5 HOH A 22 463 40 HOH TIP . J 5 HOH A 23 464 42 HOH TIP . J 5 HOH A 24 465 43 HOH TIP . J 5 HOH A 25 466 50 HOH TIP . J 5 HOH A 26 467 51 HOH TIP . J 5 HOH A 27 468 54 HOH TIP . J 5 HOH A 28 469 55 HOH TIP . J 5 HOH A 29 470 56 HOH TIP . J 5 HOH A 30 471 59 HOH TIP . J 5 HOH A 31 472 62 HOH TIP . J 5 HOH A 32 473 66 HOH TIP . J 5 HOH A 33 474 73 HOH TIP . J 5 HOH A 34 475 74 HOH TIP . J 5 HOH A 35 476 76 HOH TIP . J 5 HOH A 36 477 77 HOH TIP . J 5 HOH A 37 478 79 HOH TIP . J 5 HOH A 38 479 80 HOH TIP . J 5 HOH A 39 480 81 HOH TIP . J 5 HOH A 40 481 83 HOH TIP . J 5 HOH A 41 482 85 HOH TIP . J 5 HOH A 42 483 87 HOH TIP . J 5 HOH A 43 484 90 HOH TIP . J 5 HOH A 44 485 91 HOH TIP . J 5 HOH A 45 486 92 HOH TIP . J 5 HOH A 46 487 93 HOH TIP . J 5 HOH A 47 488 94 HOH TIP . J 5 HOH A 48 489 95 HOH TIP . J 5 HOH A 49 490 97 HOH TIP . J 5 HOH A 50 491 99 HOH TIP . J 5 HOH A 51 492 101 HOH TIP . J 5 HOH A 52 493 102 HOH TIP . J 5 HOH A 53 494 103 HOH TIP . J 5 HOH A 54 495 104 HOH TIP . J 5 HOH A 55 496 105 HOH TIP . J 5 HOH A 56 497 108 HOH TIP . J 5 HOH A 57 498 111 HOH TIP . J 5 HOH A 58 499 112 HOH TIP . J 5 HOH A 59 501 115 HOH TIP . J 5 HOH A 60 502 118 HOH TIP . J 5 HOH A 61 503 121 HOH TIP . J 5 HOH A 62 504 122 HOH TIP . J 5 HOH A 63 505 124 HOH TIP . J 5 HOH A 64 506 128 HOH TIP . J 5 HOH A 65 507 129 HOH TIP . J 5 HOH A 66 508 130 HOH TIP . J 5 HOH A 67 509 133 HOH TIP . J 5 HOH A 68 510 134 HOH TIP . J 5 HOH A 69 511 145 HOH TIP . J 5 HOH A 70 512 146 HOH TIP . J 5 HOH A 71 513 148 HOH TIP . J 5 HOH A 72 514 149 HOH TIP . J 5 HOH A 73 515 150 HOH TIP . J 5 HOH A 74 516 158 HOH TIP . J 5 HOH A 75 517 160 HOH TIP . J 5 HOH A 76 518 162 HOH TIP . J 5 HOH A 77 519 163 HOH TIP . J 5 HOH A 78 520 164 HOH TIP . J 5 HOH A 79 521 166 HOH TIP . J 5 HOH A 80 522 167 HOH TIP . J 5 HOH A 81 523 168 HOH TIP . J 5 HOH A 82 524 172 HOH TIP . J 5 HOH A 83 525 175 HOH TIP . J 5 HOH A 84 526 178 HOH TIP . J 5 HOH A 85 527 183 HOH TIP . J 5 HOH A 86 528 187 HOH TIP . J 5 HOH A 87 529 189 HOH TIP . J 5 HOH A 88 530 190 HOH TIP . J 5 HOH A 89 531 193 HOH TIP . J 5 HOH A 90 532 194 HOH TIP . J 5 HOH A 91 533 195 HOH TIP . J 5 HOH A 92 534 197 HOH TIP . J 5 HOH A 93 535 200 HOH TIP . J 5 HOH A 94 536 208 HOH TIP . J 5 HOH A 95 537 210 HOH TIP . J 5 HOH A 96 538 211 HOH TIP . J 5 HOH A 97 539 214 HOH TIP . J 5 HOH A 98 540 215 HOH TIP . J 5 HOH A 99 541 216 HOH TIP . J 5 HOH A 100 542 217 HOH TIP . J 5 HOH A 101 543 218 HOH TIP . J 5 HOH A 102 558 209 HOH TIP . K 5 HOH B 1 443 1 HOH TIP . K 5 HOH B 2 444 4 HOH TIP . K 5 HOH B 3 445 6 HOH TIP . K 5 HOH B 4 446 7 HOH TIP . K 5 HOH B 5 447 8 HOH TIP . K 5 HOH B 6 448 9 HOH TIP . K 5 HOH B 7 449 10 HOH TIP . K 5 HOH B 8 450 11 HOH TIP . K 5 HOH B 9 451 12 HOH TIP . K 5 HOH B 10 452 15 HOH TIP . K 5 HOH B 11 453 16 HOH TIP . K 5 HOH B 12 454 18 HOH TIP . K 5 HOH B 13 455 20 HOH TIP . K 5 HOH B 14 456 21 HOH TIP . K 5 HOH B 15 457 23 HOH TIP . K 5 HOH B 16 458 27 HOH TIP . K 5 HOH B 17 459 35 HOH TIP . K 5 HOH B 18 460 36 HOH TIP . K 5 HOH B 19 461 41 HOH TIP . K 5 HOH B 20 462 44 HOH TIP . K 5 HOH B 21 463 45 HOH TIP . K 5 HOH B 22 464 46 HOH TIP . K 5 HOH B 23 465 47 HOH TIP . K 5 HOH B 24 466 48 HOH TIP . K 5 HOH B 25 467 49 HOH TIP . K 5 HOH B 26 468 52 HOH TIP . K 5 HOH B 27 469 53 HOH TIP . K 5 HOH B 28 470 57 HOH TIP . K 5 HOH B 29 471 58 HOH TIP . K 5 HOH B 30 472 60 HOH TIP . K 5 HOH B 31 473 61 HOH TIP . K 5 HOH B 32 474 63 HOH TIP . K 5 HOH B 33 475 64 HOH TIP . K 5 HOH B 34 476 65 HOH TIP . K 5 HOH B 35 477 67 HOH TIP . K 5 HOH B 36 478 68 HOH TIP . K 5 HOH B 37 479 69 HOH TIP . K 5 HOH B 38 480 70 HOH TIP . K 5 HOH B 39 481 71 HOH TIP . K 5 HOH B 40 482 72 HOH TIP . K 5 HOH B 41 483 75 HOH TIP . K 5 HOH B 42 484 78 HOH TIP . K 5 HOH B 43 485 82 HOH TIP . K 5 HOH B 44 486 84 HOH TIP . K 5 HOH B 45 487 86 HOH TIP . K 5 HOH B 46 488 88 HOH TIP . K 5 HOH B 47 489 89 HOH TIP . K 5 HOH B 48 490 96 HOH TIP . K 5 HOH B 49 491 98 HOH TIP . K 5 HOH B 50 492 100 HOH TIP . K 5 HOH B 51 493 106 HOH TIP . K 5 HOH B 52 494 107 HOH TIP . K 5 HOH B 53 495 109 HOH TIP . K 5 HOH B 54 496 110 HOH TIP . K 5 HOH B 55 497 113 HOH TIP . K 5 HOH B 56 498 114 HOH TIP . K 5 HOH B 57 499 116 HOH TIP . K 5 HOH B 58 500 117 HOH TIP . K 5 HOH B 59 502 119 HOH TIP . K 5 HOH B 60 503 120 HOH TIP . K 5 HOH B 61 504 123 HOH TIP . K 5 HOH B 62 505 125 HOH TIP . K 5 HOH B 63 506 126 HOH TIP . K 5 HOH B 64 507 127 HOH TIP . K 5 HOH B 65 508 131 HOH TIP . K 5 HOH B 66 509 132 HOH TIP . K 5 HOH B 67 510 135 HOH TIP . K 5 HOH B 68 511 136 HOH TIP . K 5 HOH B 69 512 137 HOH TIP . K 5 HOH B 70 513 138 HOH TIP . K 5 HOH B 71 514 139 HOH TIP . K 5 HOH B 72 515 140 HOH TIP . K 5 HOH B 73 516 141 HOH TIP . K 5 HOH B 74 517 142 HOH TIP . K 5 HOH B 75 518 143 HOH TIP . K 5 HOH B 76 519 144 HOH TIP . K 5 HOH B 77 520 147 HOH TIP . K 5 HOH B 78 521 151 HOH TIP . K 5 HOH B 79 522 152 HOH TIP . K 5 HOH B 80 523 153 HOH TIP . K 5 HOH B 81 524 154 HOH TIP . K 5 HOH B 82 525 155 HOH TIP . K 5 HOH B 83 526 156 HOH TIP . K 5 HOH B 84 527 157 HOH TIP . K 5 HOH B 85 528 159 HOH TIP . K 5 HOH B 86 529 161 HOH TIP . K 5 HOH B 87 530 165 HOH TIP . K 5 HOH B 88 531 169 HOH TIP . K 5 HOH B 89 532 170 HOH TIP . K 5 HOH B 90 533 171 HOH TIP . K 5 HOH B 91 534 173 HOH TIP . K 5 HOH B 92 535 174 HOH TIP . K 5 HOH B 93 536 176 HOH TIP . K 5 HOH B 94 537 177 HOH TIP . K 5 HOH B 95 538 179 HOH TIP . K 5 HOH B 96 539 180 HOH TIP . K 5 HOH B 97 540 181 HOH TIP . K 5 HOH B 98 541 182 HOH TIP . K 5 HOH B 99 542 184 HOH TIP . K 5 HOH B 100 543 185 HOH TIP . K 5 HOH B 101 544 186 HOH TIP . K 5 HOH B 102 545 188 HOH TIP . K 5 HOH B 103 546 191 HOH TIP . K 5 HOH B 104 547 192 HOH TIP . K 5 HOH B 105 548 196 HOH TIP . K 5 HOH B 106 549 198 HOH TIP . K 5 HOH B 107 550 199 HOH TIP . K 5 HOH B 108 551 201 HOH TIP . K 5 HOH B 109 552 202 HOH TIP . K 5 HOH B 110 553 203 HOH TIP . K 5 HOH B 111 554 204 HOH TIP . K 5 HOH B 112 555 205 HOH TIP . K 5 HOH B 113 556 206 HOH TIP . K 5 HOH B 114 557 207 HOH TIP . K 5 HOH B 115 559 212 HOH TIP . K 5 HOH B 116 560 213 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x 30.436 _atom_site.Cartn_y 7.846 _atom_site.Cartn_z -18.83 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 59.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 441 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #