data_3TQ4 # _model_server_result.job_id RdShYTY91ScIxYAPIPyD6Q _model_server_result.datetime_utc '2024-11-13 04:32:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tq4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":155}' # _entry.id 3TQ4 # _exptl.entry_id 3TQ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3TQ4 _cell.length_a 60.564 _cell.length_b 60.564 _cell.length_c 64.018 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TQ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_775 -y+2,x-y+2,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 60.564 104.899925 0 3 'crystal symmetry operation' 3_575 -x+y,-x+2,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -60.564 104.899925 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C MG MG . A MG 153 1_555 D O1A DUP . A DUP 154 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.952 ? metalc ? metalc2 C MG MG . A MG 153 1_555 D O1B DUP . A DUP 154 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.242 ? metalc ? metalc3 C MG MG . A MG 153 1_555 D O2G DUP . A DUP 154 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.25 ? metalc ? metalc4 C MG MG . A MG 153 1_555 F O HOH . A HOH 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.978 ? metalc ? metalc5 C MG MG . A MG 153 1_555 B OP1 UMP . A UMP 777 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.385 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 379 n n C C2 TRS sing 380 n n C C3 TRS sing 381 n n C N TRS sing 382 n n C1 O1 TRS sing 383 n n C1 H11 TRS sing 384 n n C1 H12 TRS sing 385 n n C2 O2 TRS sing 386 n n C2 H21 TRS sing 387 n n C2 H22 TRS sing 388 n n C3 O3 TRS sing 389 n n C3 H31 TRS sing 390 n n C3 H32 TRS sing 391 n n N HN1 TRS sing 392 n n N HN2 TRS sing 393 n n N HN3 TRS sing 394 n n O1 HO1 TRS sing 395 n n O2 HO2 TRS sing 396 n n O3 HO3 TRS sing 397 n n # _atom_sites.entry_id 3TQ4 _atom_sites.fract_transf_matrix[1][1] 0.016511 _atom_sites.fract_transf_matrix[1][2] 0.009533 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019066 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015621 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UMP A 1 777 777 UMP UMP . C 3 MG A 1 153 1 MG MG . D 4 DUP A 1 154 777 DUP DUP . E 5 TRS A 1 155 1 TRS TRS . F 6 HOH A 1 156 1 HOH HOH . F 6 HOH A 2 157 2 HOH HOH . F 6 HOH A 3 158 3 HOH HOH . F 6 HOH A 4 159 4 HOH HOH . F 6 HOH A 5 160 5 HOH HOH . F 6 HOH A 6 161 6 HOH HOH . F 6 HOH A 7 162 7 HOH HOH . F 6 HOH A 8 163 8 HOH HOH . F 6 HOH A 9 164 9 HOH HOH . F 6 HOH A 10 165 10 HOH HOH . F 6 HOH A 11 166 11 HOH HOH . F 6 HOH A 12 167 12 HOH HOH . F 6 HOH A 13 168 13 HOH HOH . F 6 HOH A 14 169 14 HOH HOH . F 6 HOH A 15 170 15 HOH HOH . F 6 HOH A 16 171 16 HOH HOH . F 6 HOH A 17 172 17 HOH HOH . F 6 HOH A 18 173 18 HOH HOH . F 6 HOH A 19 174 19 HOH HOH . F 6 HOH A 20 175 20 HOH HOH . F 6 HOH A 21 176 21 HOH HOH . F 6 HOH A 22 177 22 HOH HOH . F 6 HOH A 23 178 23 HOH HOH . F 6 HOH A 24 179 24 HOH HOH . F 6 HOH A 25 180 25 HOH HOH . F 6 HOH A 26 181 26 HOH HOH . F 6 HOH A 27 182 27 HOH HOH . F 6 HOH A 28 183 28 HOH HOH . F 6 HOH A 29 184 29 HOH HOH . F 6 HOH A 30 185 30 HOH HOH . F 6 HOH A 31 186 31 HOH HOH . F 6 HOH A 32 187 32 HOH HOH . F 6 HOH A 33 188 33 HOH HOH . F 6 HOH A 34 189 34 HOH HOH . F 6 HOH A 35 190 35 HOH HOH . F 6 HOH A 36 191 36 HOH HOH . F 6 HOH A 37 192 37 HOH HOH . F 6 HOH A 38 193 38 HOH HOH . F 6 HOH A 39 194 39 HOH HOH . F 6 HOH A 40 195 40 HOH HOH . F 6 HOH A 41 196 41 HOH HOH . F 6 HOH A 42 197 42 HOH HOH . F 6 HOH A 43 198 43 HOH HOH . F 6 HOH A 44 199 44 HOH HOH . F 6 HOH A 45 200 45 HOH HOH . F 6 HOH A 46 201 46 HOH HOH . F 6 HOH A 47 202 47 HOH HOH . F 6 HOH A 48 203 48 HOH HOH . F 6 HOH A 49 204 49 HOH HOH . F 6 HOH A 50 205 50 HOH HOH . F 6 HOH A 51 206 54 HOH HOH . F 6 HOH A 52 207 55 HOH HOH . F 6 HOH A 53 208 56 HOH HOH . F 6 HOH A 54 209 57 HOH HOH . F 6 HOH A 55 210 58 HOH HOH . F 6 HOH A 56 211 59 HOH HOH . F 6 HOH A 57 212 60 HOH HOH . F 6 HOH A 58 213 61 HOH HOH . F 6 HOH A 59 214 62 HOH HOH . F 6 HOH A 60 215 63 HOH HOH . F 6 HOH A 61 216 64 HOH HOH . F 6 HOH A 62 217 65 HOH HOH . F 6 HOH A 63 218 66 HOH HOH . F 6 HOH A 64 219 67 HOH HOH . F 6 HOH A 65 220 68 HOH HOH . F 6 HOH A 66 221 69 HOH HOH . F 6 HOH A 67 222 70 HOH HOH . F 6 HOH A 68 223 71 HOH HOH . F 6 HOH A 69 224 72 HOH HOH . F 6 HOH A 70 225 73 HOH HOH . F 6 HOH A 71 226 74 HOH HOH . F 6 HOH A 72 227 75 HOH HOH . F 6 HOH A 73 228 76 HOH HOH . F 6 HOH A 74 229 77 HOH HOH . F 6 HOH A 75 230 78 HOH HOH . F 6 HOH A 76 231 79 HOH HOH . F 6 HOH A 77 232 80 HOH HOH . F 6 HOH A 78 233 81 HOH HOH . F 6 HOH A 79 234 82 HOH HOH . F 6 HOH A 80 235 83 HOH HOH . F 6 HOH A 81 236 84 HOH HOH . F 6 HOH A 82 237 87 HOH HOH . F 6 HOH A 83 238 88 HOH HOH . F 6 HOH A 84 239 89 HOH HOH . F 6 HOH A 85 240 90 HOH HOH . F 6 HOH A 86 241 91 HOH HOH . F 6 HOH A 87 242 92 HOH HOH . F 6 HOH A 88 243 93 HOH HOH . F 6 HOH A 89 244 95 HOH HOH . F 6 HOH A 90 245 96 HOH HOH . F 6 HOH A 91 246 98 HOH HOH . F 6 HOH A 92 247 99 HOH HOH . F 6 HOH A 93 248 100 HOH HOH . F 6 HOH A 94 249 101 HOH HOH . F 6 HOH A 95 250 102 HOH HOH . F 6 HOH A 96 251 103 HOH HOH . F 6 HOH A 97 252 104 HOH HOH . F 6 HOH A 98 253 105 HOH HOH . F 6 HOH A 99 254 106 HOH HOH . F 6 HOH A 100 255 107 HOH HOH . F 6 HOH A 101 256 108 HOH HOH . F 6 HOH A 102 257 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . E 5 -0.371 69.788 24.851 0.33 26.75 ? C TRS 155 A 1 HETATM 2 C C1 TRS . . . E 5 -0.776 71.234 24.574 0.33 28.49 ? C1 TRS 155 A 1 HETATM 3 C C2 TRS . . . E 5 1.08 69.577 24.422 0.33 26.46 ? C2 TRS 155 A 1 HETATM 4 C C3 TRS . . . E 5 -1.392 68.829 24.211 0.33 27.26 ? C3 TRS 155 A 1 HETATM 5 N N TRS . . . E 5 -0.39 69.598 26.282 0.33 28.81 ? N TRS 155 A 1 HETATM 6 O O1 TRS . . . E 5 0.304 72.147 24.415 0.33 30.49 ? O1 TRS 155 A 1 HETATM 7 O O2 TRS . . . E 5 1.571 68.249 24.348 0.33 20.91 ? O2 TRS 155 A 1 HETATM 8 O O3 TRS . . . E 5 -2.594 68.54 24.933 0.33 19.48 ? O3 TRS 155 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 8 #