data_3TQA # _model_server_result.job_id rm1_ZxpQHZVFRb9dfq3wYg _model_server_result.datetime_utc '2024-11-28 03:44:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tqa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 3TQA # _exptl.entry_id 3TQA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.02 _cell.angle_gamma 90 _cell.entry_id 3TQA _cell.length_a 49.419 _cell.length_b 37.026 _cell.length_c 52.989 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TQA _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 235 n n PA O2A NDP sing 236 n n PA O5B NDP sing 237 n n PA O3 NDP sing 238 n n O2A HOA2 NDP sing 239 n n O5B C5B NDP sing 240 n n C5B C4B NDP sing 241 n n C5B H51A NDP sing 242 n n C5B H52A NDP sing 243 n n C4B O4B NDP sing 244 n n C4B C3B NDP sing 245 n n C4B H4B NDP sing 246 n n O4B C1B NDP sing 247 n n C3B O3B NDP sing 248 n n C3B C2B NDP sing 249 n n C3B H3B NDP sing 250 n n O3B HO3A NDP sing 251 n n C2B O2B NDP sing 252 n n C2B C1B NDP sing 253 n n C2B H2B NDP sing 254 n n O2B P2B NDP sing 255 n n C1B N9A NDP sing 256 n n C1B H1B NDP sing 257 n n N9A C8A NDP sing 258 n y N9A C4A NDP sing 259 n y C8A N7A NDP doub 260 n y C8A H8A NDP sing 261 n n N7A C5A NDP sing 262 n y C5A C6A NDP sing 263 n y C5A C4A NDP doub 264 n y C6A N6A NDP sing 265 n n C6A N1A NDP doub 266 n y N6A H61A NDP sing 267 n n N6A H62A NDP sing 268 n n N1A C2A NDP sing 269 n y C2A N3A NDP doub 270 n y C2A H2A NDP sing 271 n n N3A C4A NDP sing 272 n y O3 PN NDP sing 273 n n PN O1N NDP doub 274 n n PN O2N NDP sing 275 n n PN O5D NDP sing 276 n n O2N H21N NDP sing 277 n n O5D C5D NDP sing 278 n n C5D C4D NDP sing 279 n n C5D H51N NDP sing 280 n n C5D H52N NDP sing 281 n n C4D O4D NDP sing 282 n n C4D C3D NDP sing 283 n n C4D H4D NDP sing 284 n n O4D C1D NDP sing 285 n n C3D O3D NDP sing 286 n n C3D C2D NDP sing 287 n n C3D H3D NDP sing 288 n n O3D HO3N NDP sing 289 n n C2D O2D NDP sing 290 n n C2D C1D NDP sing 291 n n C2D H2D NDP sing 292 n n O2D HO2N NDP sing 293 n n C1D N1N NDP sing 294 n n C1D H1D NDP sing 295 n n N1N C2N NDP sing 296 n n N1N C6N NDP sing 297 n n C2N C3N NDP doub 298 n n C2N H2N NDP sing 299 n n C3N C7N NDP sing 300 n n C3N C4N NDP sing 301 n n C7N O7N NDP doub 302 n n C7N N7N NDP sing 303 n n N7N H71N NDP sing 304 n n N7N H72N NDP sing 305 n n C4N C5N NDP sing 306 n n C4N H41N NDP sing 307 n n C4N H42N NDP sing 308 n n C5N C6N NDP doub 309 n n C5N H5N NDP sing 310 n n C6N H6N NDP sing 311 n n P2B O1X NDP doub 312 n n P2B O2X NDP sing 313 n n P2B O3X NDP sing 314 n n O2X HOP2 NDP sing 315 n n O3X HOP3 NDP sing 316 n n # _atom_sites.entry_id 3TQA _atom_sites.fract_transf_matrix[1][1] 0.020235 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006583 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027008 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019845 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id NDP _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1001 _pdbx_nonpoly_scheme.auth_seq_num 1001 _pdbx_nonpoly_scheme.pdb_mon_id NDP _pdbx_nonpoly_scheme.auth_mon_id NDP _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . B 2 19.44 8.991 8.162 1 60.46 ? PA NDP 1001 A 1 HETATM 2 O O1A NDP . . . B 2 18.87 8.221 6.996 1 60.71 ? O1A NDP 1001 A 1 HETATM 3 O O2A NDP . . . B 2 19.473 8.375 9.536 1 60.64 ? O2A NDP 1001 A 1 HETATM 4 O O5B NDP . . . B 2 20.95 9.376 7.802 1 59.66 ? O5B NDP 1001 A 1 HETATM 5 C C5B NDP . . . B 2 21.249 10.191 6.673 1 58.82 ? C5B NDP 1001 A 1 HETATM 6 C C4B NDP . . . B 2 22.761 10.201 6.538 1 58.12 ? C4B NDP 1001 A 1 HETATM 7 O O4B NDP . . . B 2 23.241 8.853 6.489 1 57.86 ? O4B NDP 1001 A 1 HETATM 8 C C3B NDP . . . B 2 23.27 10.879 5.278 1 57.81 ? C3B NDP 1001 A 1 HETATM 9 O O3B NDP . . . B 2 23.457 12.283 5.469 1 57.87 ? O3B NDP 1001 A 1 HETATM 10 C C2B NDP . . . B 2 24.562 10.134 5.04 1 57.42 ? C2B NDP 1001 A 1 HETATM 11 O O2B NDP . . . B 2 25.578 10.584 5.931 1 57.15 ? O2B NDP 1001 A 1 HETATM 12 C C1B NDP . . . B 2 24.231 8.716 5.466 1 57.28 ? C1B NDP 1001 A 1 HETATM 13 N N9A NDP . . . B 2 23.718 7.869 4.36 1 56.77 ? N9A NDP 1001 A 1 HETATM 14 C C8A NDP . . . B 2 22.43 7.542 4.13 1 56.83 ? C8A NDP 1001 A 1 HETATM 15 N N7A NDP . . . B 2 22.323 6.74 3.037 1 56.81 ? N7A NDP 1001 A 1 HETATM 16 C C5A NDP . . . B 2 23.56 6.536 2.557 1 56.53 ? C5A NDP 1001 A 1 HETATM 17 C C6A NDP . . . B 2 24.163 5.79 1.428 1 56.69 ? C6A NDP 1001 A 1 HETATM 18 N N6A NDP . . . B 2 23.397 5.079 0.569 1 57.28 ? N6A NDP 1001 A 1 HETATM 19 N N1A NDP . . . B 2 25.506 5.84 1.281 1 56.41 ? N1A NDP 1001 A 1 HETATM 20 C C2A NDP . . . B 2 26.29 6.541 2.125 1 56.59 ? C2A NDP 1001 A 1 HETATM 21 N N3A NDP . . . B 2 25.803 7.241 3.17 1 56.45 ? N3A NDP 1001 A 1 HETATM 22 C C4A NDP . . . B 2 24.476 7.279 3.435 1 56.45 ? C4A NDP 1001 A 1 HETATM 23 O O3 NDP . . . B 2 18.761 10.455 8.244 1 61.9 ? O3 NDP 1001 A 1 HETATM 24 P PN NDP . . . B 2 17.171 10.712 8.244 1 63.04 ? PN NDP 1001 A 1 HETATM 25 O O1N NDP . . . B 2 16.555 10.053 7.031 1 62.8 ? O1N NDP 1001 A 1 HETATM 26 O O2N NDP . . . B 2 16.961 12.189 8.471 1 63.7 ? O2N NDP 1001 A 1 HETATM 27 O O5D NDP . . . B 2 16.677 9.929 9.561 1 64.22 ? O5D NDP 1001 A 1 HETATM 28 C C5D NDP . . . B 2 16.82 10.477 10.872 1 65.08 ? C5D NDP 1001 A 1 HETATM 29 C C4D NDP . . . B 2 15.435 10.77 11.436 1 65.86 ? C4D NDP 1001 A 1 HETATM 30 O O4D NDP . . . B 2 14.649 9.572 11.414 1 66.29 ? O4D NDP 1001 A 1 HETATM 31 C C3D NDP . . . B 2 15.483 11.244 12.881 1 66.29 ? C3D NDP 1001 A 1 HETATM 32 O O3D NDP . . . B 2 14.537 12.297 13.084 1 66.67 ? O3D NDP 1001 A 1 HETATM 33 C C2D NDP . . . B 2 15.093 10.027 13.695 1 66.53 ? C2D NDP 1001 A 1 HETATM 34 O O2D NDP . . . B 2 14.388 10.388 14.889 1 66.98 ? O2D NDP 1001 A 1 HETATM 35 C C1D NDP . . . B 2 14.215 9.234 12.736 1 66.49 ? C1D NDP 1001 A 1 HETATM 36 N N1N NDP . . . B 2 14.31 7.789 12.974 1 66.59 ? N1N NDP 1001 A 1 HETATM 37 C C2N NDP . . . B 2 13.221 7.154 13.444 1 66.87 ? C2N NDP 1001 A 1 HETATM 38 C C3N NDP . . . B 2 13.22 5.788 13.699 1 66.97 ? C3N NDP 1001 A 1 HETATM 39 C C7N NDP . . . B 2 11.993 5.1 14.225 1 67.26 ? C7N NDP 1001 A 1 HETATM 40 O O7N NDP . . . B 2 12.023 3.897 14.439 1 67.43 ? O7N NDP 1001 A 1 HETATM 41 N N7N NDP . . . B 2 10.892 5.82 14.447 1 67.08 ? N7N NDP 1001 A 1 HETATM 42 C C4N NDP . . . B 2 14.489 5.029 13.43 1 66.86 ? C4N NDP 1001 A 1 HETATM 43 C C5N NDP . . . B 2 15.62 5.79 12.922 1 66.64 ? C5N NDP 1001 A 1 HETATM 44 C C6N NDP . . . B 2 15.47 7.156 12.713 1 66.65 ? C6N NDP 1001 A 1 HETATM 45 P P2B NDP . . . B 2 26.641 11.739 5.602 1 56.67 ? P2B NDP 1001 A 1 HETATM 46 O O1X NDP . . . B 2 25.789 12.977 5.492 1 57.28 ? O1X NDP 1001 A 1 HETATM 47 O O2X NDP . . . B 2 27.546 11.726 6.809 1 56.96 ? O2X NDP 1001 A 1 HETATM 48 O O3X NDP . . . B 2 27.297 11.287 4.32 1 56.59 ? O3X NDP 1001 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 48 #