data_3TR8
#
_model_server_result.job_id            qt4h0xQ04RjNN9shmTQ_zA 
_model_server_result.datetime_utc      '2024-11-29 20:05:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3tr8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":186}' 
#
_entry.id    3TR8 
#
_exptl.entry_id    3TR8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              59.044 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.41 
_cell.angle_gamma         90 
_cell.entry_id            3TR8 
_cell.length_a            117.656 
_cell.length_b            61.3 
_cell.length_c            58.094 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TR8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             H 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 113 A CYS 110 1_555 B SG CYS 113 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C MSE 4 A MSE 1 1_555 A N ASP 5 A ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale3 A C GLU 17 A GLU 14 1_555 A N MSE 18 A MSE 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale4 A C MSE 18 A MSE 15 1_555 A N THR 19 A THR 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale5 A C ALA 60 A ALA 57 1_555 A N MSE 61 A MSE 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale6 A C MSE 61 A MSE 58 1_555 A N ASP 62 A ASP 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale7 A C TYR 122 A TYR 119 1_555 A N MSE 123 A MSE 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale8 A C MSE 123 A MSE 120 1_555 A N PRO 124 A PRO 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale9 B C ALA 3 B ALA 0 1_555 B N MSE 4 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale10 B C MSE 4 B MSE 1 1_555 B N ASP 5 B ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale11 B C GLU 17 B GLU 14 1_555 B N MSE 18 B MSE 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale12 B C MSE 18 B MSE 15 1_555 B N THR 19 B THR 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale13 B C ALA 60 B ALA 57 1_555 B N MSE 61 B MSE 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale14 B C MSE 61 B MSE 58 1_555 B N ASP 62 B ASP 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale15 B C TYR 122 B TYR 119 1_555 B N MSE 123 B MSE 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale16 B C MSE 123 B MSE 120 1_555 B N PRO 124 B PRO 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
metalc ? metalc1 A OD2 ASP 15 A ASP 12 1_555 C MN MN . A MN 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? 
metalc ? metalc2 A OD1 ASP 15 A ASP 12 1_555 D MN MN . A MN 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? 
metalc ? metalc3 A OE2 GLU 17 A GLU 14 1_555 C MN MN . A MN 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc4 A OD2 ASP 166 A ASP 163 1_555 C MN MN . A MN 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? 
metalc ? metalc5 C MN MN . A MN 184 1_555 D MN MN . A MN 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.899 ? 
metalc ? metalc6 D MN MN . A MN 185 1_555 J O HOH . A HOH 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc7 E MG MG . A MG 186 1_555 J O HOH . A HOH 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? 
metalc ? metalc8 B OD2 ASP 15 B ASP 12 1_555 F MN MN . B MN 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? 
metalc ? metalc9 B OD1 ASP 15 B ASP 12 1_555 G MN MN . B MN 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? 
metalc ? metalc10 B OE2 GLU 17 B GLU 14 1_555 F MN MN . B MN 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? 
metalc ? metalc11 B OD2 ASP 166 B ASP 163 1_555 F MN MN . B MN 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? 
metalc ? metalc12 F MN MN . B MN 184 1_555 G MN MN . B MN 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? 
metalc ? metalc13 G MN MN . B MN 185 1_555 K O HOH . B HOH 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc14 G MN MN . B MN 185 1_555 K O HOH . B HOH 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? 
metalc ? metalc15 I MG MG . B MG 187 1_555 K O HOH . B HOH 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
#
_chem_comp.formula           'C2 H3 O2 -1' 
_chem_comp.formula_weight    59.044 
_chem_comp.id                ACT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACT doub 1 n n 
C OXT ACT sing 2 n n 
C CH3 ACT sing 3 n n 
CH3 H1 ACT sing 4 n n 
CH3 H2 ACT sing 5 n n 
CH3 H3 ACT sing 6 n n 
#
_atom_sites.entry_id                     3TR8 
_atom_sites.fract_transf_matrix[1][1]    0.008499 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003506 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016313 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01862 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MN A 1 184 1 MN MN . 
D 2 MN A 1 185 2 MN MN . 
E 3 MG A 1 186 1 MG MG . 
F 2 MN B 1 184 3 MN MN . 
G 2 MN B 1 185 4 MN MN . 
H 4 ACT B 1 186 1 ACT ACT . 
I 3 MG B 1 187 2 MG MG . 
J 5 HOH A 1 187 1 HOH HOH . 
J 5 HOH A 2 188 2 HOH HOH . 
J 5 HOH A 3 189 4 HOH HOH . 
J 5 HOH A 4 190 6 HOH HOH . 
J 5 HOH A 5 191 7 HOH HOH . 
J 5 HOH A 6 192 10 HOH HOH . 
J 5 HOH A 7 193 11 HOH HOH . 
J 5 HOH A 8 194 17 HOH HOH . 
J 5 HOH A 9 195 18 HOH HOH . 
J 5 HOH A 10 196 23 HOH HOH . 
J 5 HOH A 11 197 24 HOH HOH . 
J 5 HOH A 12 198 25 HOH HOH . 
J 5 HOH A 13 199 26 HOH HOH . 
J 5 HOH A 14 200 29 HOH HOH . 
J 5 HOH A 15 201 30 HOH HOH . 
J 5 HOH A 16 202 31 HOH HOH . 
J 5 HOH A 17 203 32 HOH HOH . 
J 5 HOH A 18 204 33 HOH HOH . 
J 5 HOH A 19 205 35 HOH HOH . 
J 5 HOH A 20 206 43 HOH HOH . 
J 5 HOH A 21 207 44 HOH HOH . 
J 5 HOH A 22 208 45 HOH HOH . 
J 5 HOH A 23 209 48 HOH HOH . 
J 5 HOH A 24 210 49 HOH HOH . 
J 5 HOH A 25 211 50 HOH HOH . 
J 5 HOH A 26 212 53 HOH HOH . 
J 5 HOH A 27 213 56 HOH HOH . 
J 5 HOH A 28 214 58 HOH HOH . 
J 5 HOH A 29 215 66 HOH HOH . 
J 5 HOH A 30 216 68 HOH HOH . 
J 5 HOH A 31 217 70 HOH HOH . 
J 5 HOH A 32 218 71 HOH HOH . 
J 5 HOH A 33 219 72 HOH HOH . 
J 5 HOH A 34 220 74 HOH HOH . 
J 5 HOH A 35 221 75 HOH HOH . 
J 5 HOH A 36 222 77 HOH HOH . 
J 5 HOH A 37 223 81 HOH HOH . 
J 5 HOH A 38 224 82 HOH HOH . 
J 5 HOH A 39 225 83 HOH HOH . 
J 5 HOH A 40 226 85 HOH HOH . 
J 5 HOH A 41 227 88 HOH HOH . 
J 5 HOH A 42 228 89 HOH HOH . 
J 5 HOH A 43 229 91 HOH HOH . 
J 5 HOH A 44 230 93 HOH HOH . 
J 5 HOH A 45 231 94 HOH HOH . 
J 5 HOH A 46 232 95 HOH HOH . 
J 5 HOH A 47 233 98 HOH HOH . 
J 5 HOH A 48 234 99 HOH HOH . 
J 5 HOH A 49 235 100 HOH HOH . 
J 5 HOH A 50 236 101 HOH HOH . 
J 5 HOH A 51 237 102 HOH HOH . 
J 5 HOH A 52 238 103 HOH HOH . 
J 5 HOH A 53 239 104 HOH HOH . 
J 5 HOH A 54 240 106 HOH HOH . 
J 5 HOH A 55 241 109 HOH HOH . 
J 5 HOH A 56 242 111 HOH HOH . 
J 5 HOH A 57 243 112 HOH HOH . 
J 5 HOH A 58 244 116 HOH HOH . 
J 5 HOH A 59 245 117 HOH HOH . 
J 5 HOH A 60 246 118 HOH HOH . 
J 5 HOH A 61 247 119 HOH HOH . 
J 5 HOH A 62 248 120 HOH HOH . 
J 5 HOH A 63 249 123 HOH HOH . 
J 5 HOH A 64 250 124 HOH HOH . 
J 5 HOH A 65 251 126 HOH HOH . 
K 5 HOH B 1 188 3 HOH HOH . 
K 5 HOH B 2 189 5 HOH HOH . 
K 5 HOH B 3 190 8 HOH HOH . 
K 5 HOH B 4 191 9 HOH HOH . 
K 5 HOH B 5 192 12 HOH HOH . 
K 5 HOH B 6 193 13 HOH HOH . 
K 5 HOH B 7 194 14 HOH HOH . 
K 5 HOH B 8 195 15 HOH HOH . 
K 5 HOH B 9 196 16 HOH HOH . 
K 5 HOH B 10 197 19 HOH HOH . 
K 5 HOH B 11 198 20 HOH HOH . 
K 5 HOH B 12 199 21 HOH HOH . 
K 5 HOH B 13 200 22 HOH HOH . 
K 5 HOH B 14 201 27 HOH HOH . 
K 5 HOH B 15 202 28 HOH HOH . 
K 5 HOH B 16 203 34 HOH HOH . 
K 5 HOH B 17 204 36 HOH HOH . 
K 5 HOH B 18 205 37 HOH HOH . 
K 5 HOH B 19 206 38 HOH HOH . 
K 5 HOH B 20 207 39 HOH HOH . 
K 5 HOH B 21 208 40 HOH HOH . 
K 5 HOH B 22 209 41 HOH HOH . 
K 5 HOH B 23 210 42 HOH HOH . 
K 5 HOH B 24 211 46 HOH HOH . 
K 5 HOH B 25 212 47 HOH HOH . 
K 5 HOH B 26 213 51 HOH HOH . 
K 5 HOH B 27 214 52 HOH HOH . 
K 5 HOH B 28 215 54 HOH HOH . 
K 5 HOH B 29 216 55 HOH HOH . 
K 5 HOH B 30 217 57 HOH HOH . 
K 5 HOH B 31 218 59 HOH HOH . 
K 5 HOH B 32 219 60 HOH HOH . 
K 5 HOH B 33 220 61 HOH HOH . 
K 5 HOH B 34 221 62 HOH HOH . 
K 5 HOH B 35 222 63 HOH HOH . 
K 5 HOH B 36 223 64 HOH HOH . 
K 5 HOH B 37 224 65 HOH HOH . 
K 5 HOH B 38 225 67 HOH HOH . 
K 5 HOH B 39 226 69 HOH HOH . 
K 5 HOH B 40 227 73 HOH HOH . 
K 5 HOH B 41 228 76 HOH HOH . 
K 5 HOH B 42 229 78 HOH HOH . 
K 5 HOH B 43 230 79 HOH HOH . 
K 5 HOH B 44 231 80 HOH HOH . 
K 5 HOH B 45 232 84 HOH HOH . 
K 5 HOH B 46 233 86 HOH HOH . 
K 5 HOH B 47 234 87 HOH HOH . 
K 5 HOH B 48 235 90 HOH HOH . 
K 5 HOH B 49 236 92 HOH HOH . 
K 5 HOH B 50 237 96 HOH HOH . 
K 5 HOH B 51 238 97 HOH HOH . 
K 5 HOH B 52 239 105 HOH HOH . 
K 5 HOH B 53 240 107 HOH HOH . 
K 5 HOH B 54 241 108 HOH HOH . 
K 5 HOH B 55 242 110 HOH HOH . 
K 5 HOH B 56 243 113 HOH HOH . 
K 5 HOH B 57 244 114 HOH HOH . 
K 5 HOH B 58 245 115 HOH HOH . 
K 5 HOH B 59 246 121 HOH HOH . 
K 5 HOH B 60 247 122 HOH HOH . 
K 5 HOH B 61 248 125 HOH HOH . 
K 5 HOH B 62 249 127 HOH HOH . 
K 5 HOH B 63 250 128 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACT . . . H 4 19.246 15.1 18.838 1 39.84 ? C ACT 186 B 1 
HETATM 2 O O ACT . . . H 4 18.349 15.035 17.966 1 32.91 ? O ACT 186 B 1 
HETATM 3 O OXT ACT . . . H 4 19.961 16.128 18.831 1 35.68 ? OXT ACT 186 B 1 
HETATM 4 C CH3 ACT . . . H 4 19.451 14.001 19.839 1 31.13 ? CH3 ACT 186 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#