data_3TRG # _model_server_result.job_id ykSyXUfdtX50waNPd9giYA _model_server_result.datetime_utc '2024-11-26 09:42:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3trg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":97}' # _entry.id 3TRG # _exptl.entry_id 3TRG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3TRG _cell.length_a 69.71 _cell.length_b 69.71 _cell.length_c 40.059 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TRG _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 13 A CYS 10 1_555 A SG CYS 57 A CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? covale ? covale1 A C MSE 4 A MSE 1 1_555 A N THR 5 A THR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C ILE 63 A ILE 60 1_555 A N MSE 64 A MSE 61 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C ILE 63 A ILE 60 1_555 A N MSE 64 A MSE 61 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C MSE 64 A MSE 61 1_555 A N ILE 65 A ILE 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3TRG _atom_sites.fract_transf_matrix[1][1] 0.014345 _atom_sites.fract_transf_matrix[1][2] 0.008282 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016564 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024963 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 96 96 CL CL . C 3 EDO A 1 97 97 EDO EDO . D 4 HOH A 1 98 98 HOH HOH . D 4 HOH A 2 99 99 HOH HOH . D 4 HOH A 3 100 100 HOH HOH . D 4 HOH A 4 101 101 HOH HOH . D 4 HOH A 5 102 102 HOH HOH . D 4 HOH A 6 103 103 HOH HOH . D 4 HOH A 7 104 104 HOH HOH . D 4 HOH A 8 105 105 HOH HOH . D 4 HOH A 9 106 106 HOH HOH . D 4 HOH A 10 107 107 HOH HOH . D 4 HOH A 11 108 108 HOH HOH . D 4 HOH A 12 109 109 HOH HOH . D 4 HOH A 13 110 110 HOH HOH . D 4 HOH A 14 111 111 HOH HOH . D 4 HOH A 15 112 112 HOH HOH . D 4 HOH A 16 113 113 HOH HOH . D 4 HOH A 17 114 114 HOH HOH . D 4 HOH A 18 115 115 HOH HOH . D 4 HOH A 19 116 116 HOH HOH . D 4 HOH A 20 117 117 HOH HOH . D 4 HOH A 21 118 118 HOH HOH . D 4 HOH A 22 119 119 HOH HOH . D 4 HOH A 23 120 120 HOH HOH . D 4 HOH A 24 121 121 HOH HOH . D 4 HOH A 25 122 122 HOH HOH . D 4 HOH A 26 123 123 HOH HOH . D 4 HOH A 27 124 124 HOH HOH . D 4 HOH A 28 125 125 HOH HOH . D 4 HOH A 29 126 126 HOH HOH . D 4 HOH A 30 127 127 HOH HOH . D 4 HOH A 31 128 128 HOH HOH . D 4 HOH A 32 129 129 HOH HOH . D 4 HOH A 33 130 130 HOH HOH . D 4 HOH A 34 131 131 HOH HOH . D 4 HOH A 35 132 132 HOH HOH . D 4 HOH A 36 133 133 HOH HOH . D 4 HOH A 37 134 134 HOH HOH . D 4 HOH A 38 135 135 HOH HOH . D 4 HOH A 39 136 136 HOH HOH . D 4 HOH A 40 137 137 HOH HOH . D 4 HOH A 41 138 138 HOH HOH . D 4 HOH A 42 139 139 HOH HOH . D 4 HOH A 43 140 140 HOH HOH . D 4 HOH A 44 141 141 HOH HOH . D 4 HOH A 45 142 142 HOH HOH . D 4 HOH A 46 143 143 HOH HOH . D 4 HOH A 47 144 144 HOH HOH . D 4 HOH A 48 145 145 HOH HOH . D 4 HOH A 49 146 146 HOH HOH . D 4 HOH A 50 147 147 HOH HOH . D 4 HOH A 51 148 148 HOH HOH . D 4 HOH A 52 149 149 HOH HOH . D 4 HOH A 53 150 150 HOH HOH . D 4 HOH A 54 151 151 HOH HOH . D 4 HOH A 55 152 152 HOH HOH . D 4 HOH A 56 153 153 HOH HOH . D 4 HOH A 57 154 154 HOH HOH . D 4 HOH A 58 155 155 HOH HOH . D 4 HOH A 59 156 156 HOH HOH . D 4 HOH A 60 157 157 HOH HOH . D 4 HOH A 61 158 158 HOH HOH . D 4 HOH A 62 159 159 HOH HOH . D 4 HOH A 63 160 160 HOH HOH . D 4 HOH A 64 161 161 HOH HOH . D 4 HOH A 65 162 162 HOH HOH . D 4 HOH A 66 163 163 HOH HOH . D 4 HOH A 67 164 164 HOH HOH . D 4 HOH A 68 165 165 HOH HOH . D 4 HOH A 69 166 166 HOH HOH . D 4 HOH A 70 167 167 HOH HOH . D 4 HOH A 71 168 168 HOH HOH . D 4 HOH A 72 169 169 HOH HOH . D 4 HOH A 73 170 170 HOH HOH . D 4 HOH A 74 171 171 HOH HOH . D 4 HOH A 75 172 172 HOH HOH . D 4 HOH A 76 173 173 HOH HOH . D 4 HOH A 77 174 174 HOH HOH . D 4 HOH A 78 175 175 HOH HOH . D 4 HOH A 79 176 176 HOH HOH . D 4 HOH A 80 177 177 HOH HOH . D 4 HOH A 81 178 178 HOH HOH . D 4 HOH A 82 179 179 HOH HOH . D 4 HOH A 83 180 180 HOH HOH . D 4 HOH A 84 181 181 HOH HOH . D 4 HOH A 85 182 182 HOH HOH . D 4 HOH A 86 183 183 HOH HOH . D 4 HOH A 87 184 184 HOH HOH . D 4 HOH A 88 185 185 HOH HOH . D 4 HOH A 89 186 186 HOH HOH . D 4 HOH A 90 187 187 HOH HOH . D 4 HOH A 91 188 188 HOH HOH . D 4 HOH A 92 189 189 HOH HOH . D 4 HOH A 93 190 190 HOH HOH . D 4 HOH A 94 191 191 HOH HOH . D 4 HOH A 95 192 192 HOH HOH . D 4 HOH A 96 193 193 HOH HOH . D 4 HOH A 97 194 194 HOH HOH . D 4 HOH A 98 195 195 HOH HOH . D 4 HOH A 99 196 196 HOH HOH . D 4 HOH A 100 197 197 HOH HOH . D 4 HOH A 101 198 198 HOH HOH . D 4 HOH A 102 199 199 HOH HOH . D 4 HOH A 103 200 200 HOH HOH . D 4 HOH A 104 201 201 HOH HOH . D 4 HOH A 105 202 202 HOH HOH . D 4 HOH A 106 203 203 HOH HOH . D 4 HOH A 107 204 204 HOH HOH . D 4 HOH A 108 205 205 HOH HOH . D 4 HOH A 109 206 206 HOH HOH . D 4 HOH A 110 207 207 HOH HOH . D 4 HOH A 111 208 208 HOH HOH . D 4 HOH A 112 209 209 HOH HOH . D 4 HOH A 113 210 210 HOH HOH . D 4 HOH A 114 211 211 HOH HOH . D 4 HOH A 115 212 212 HOH HOH . D 4 HOH A 116 213 213 HOH HOH . D 4 HOH A 117 214 214 HOH HOH . D 4 HOH A 118 215 215 HOH HOH . D 4 HOH A 119 216 216 HOH HOH . D 4 HOH A 120 217 217 HOH HOH . D 4 HOH A 121 218 218 HOH HOH . D 4 HOH A 122 219 219 HOH HOH . D 4 HOH A 123 220 220 HOH HOH . D 4 HOH A 124 221 221 HOH HOH . D 4 HOH A 125 222 222 HOH HOH . D 4 HOH A 126 223 223 HOH HOH . D 4 HOH A 127 224 224 HOH HOH . D 4 HOH A 128 225 225 HOH HOH . D 4 HOH A 129 226 226 HOH HOH . D 4 HOH A 130 227 227 HOH HOH . D 4 HOH A 131 228 228 HOH HOH . D 4 HOH A 132 229 229 HOH HOH . D 4 HOH A 133 230 230 HOH HOH . D 4 HOH A 134 231 231 HOH HOH . D 4 HOH A 135 232 232 HOH HOH . D 4 HOH A 136 233 233 HOH HOH . D 4 HOH A 137 234 234 HOH HOH . D 4 HOH A 138 235 235 HOH HOH . D 4 HOH A 139 236 236 HOH HOH . D 4 HOH A 140 237 237 HOH HOH . D 4 HOH A 141 238 238 HOH HOH . D 4 HOH A 142 239 239 HOH HOH . D 4 HOH A 143 240 240 HOH HOH . D 4 HOH A 144 241 241 HOH HOH . D 4 HOH A 145 242 242 HOH HOH . D 4 HOH A 146 243 243 HOH HOH . D 4 HOH A 147 244 244 HOH HOH . D 4 HOH A 148 245 245 HOH HOH . D 4 HOH A 149 246 246 HOH HOH . D 4 HOH A 150 247 247 HOH HOH . D 4 HOH A 151 248 248 HOH HOH . D 4 HOH A 152 249 249 HOH HOH . D 4 HOH A 153 250 250 HOH HOH . D 4 HOH A 154 251 251 HOH HOH . D 4 HOH A 155 252 252 HOH HOH . D 4 HOH A 156 253 253 HOH HOH . D 4 HOH A 157 254 254 HOH HOH . D 4 HOH A 158 255 255 HOH HOH . D 4 HOH A 159 256 256 HOH HOH . D 4 HOH A 160 257 257 HOH HOH . D 4 HOH A 161 258 258 HOH HOH . D 4 HOH A 162 259 259 HOH HOH . D 4 HOH A 163 260 260 HOH HOH . D 4 HOH A 164 261 261 HOH HOH . D 4 HOH A 165 262 262 HOH HOH . D 4 HOH A 166 263 263 HOH HOH . D 4 HOH A 167 264 264 HOH HOH . D 4 HOH A 168 265 265 HOH HOH . D 4 HOH A 169 266 266 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 30.906 14.813 -16.941 1 24.86 ? C1 EDO 97 A 1 HETATM 2 O O1 EDO . . . C 3 31.43 15.751 -15.991 1 19.18 ? O1 EDO 97 A 1 HETATM 3 C C2 EDO . . . C 3 29.976 15.541 -17.901 1 30.06 ? C2 EDO 97 A 1 HETATM 4 O O2 EDO . . . C 3 30.718 16.47 -18.694 1 29.85 ? O2 EDO 97 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 418 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #