data_3TRI # _model_server_result.job_id a9ig992rxk5pOgpdftkumA _model_server_result.datetime_utc '2024-11-04 23:01:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tri # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":283}' # _entry.id 3TRI # _exptl.entry_id 3TRI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3TRI _cell.length_a 75.411 _cell.length_b 75.411 _cell.length_c 189.234 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TRI _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASN 13 A ASN 13 1_555 A N MSE 14 A MSE 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C MSE 14 A MSE 14 1_555 A N ALA 15 A ALA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C LYS 77 A LYS 77 1_555 A N MSE 78 A MSE 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C MSE 78 A MSE 78 1_555 A N VAL 79 A VAL 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C ALA 119 A ALA 119 1_555 A N MSE 120 A MSE 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 A C MSE 120 A MSE 120 1_555 A N PRO 121 A PRO 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale7 A C ILE 151 A ILE 151 1_555 A N MSE 152 A MSE 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 A C MSE 152 A MSE 152 1_555 A N ARG 153 A ARG 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 A C ILE 184 A ILE 184 1_555 A N MSE 185 A MSE 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 A C MSE 185 A MSE 185 1_555 A N GLU 186 A GLU 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale11 A C ARG 215 A ARG 215 1_555 A N MSE 216 A MSE 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 A C MSE 216 A MSE 216 1_555 A N ALA 217 A ALA 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale13 B C ASN 13 B ASN 13 1_555 B N MSE 14 B MSE 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale14 B C MSE 14 B MSE 14 1_555 B N ALA 15 B ALA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale15 B C LYS 77 B LYS 77 1_555 B N MSE 78 B MSE 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale16 B C MSE 78 B MSE 78 1_555 B N VAL 79 B VAL 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale17 B C ALA 119 B ALA 119 1_555 B N MSE 120 B MSE 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale18 B C MSE 120 B MSE 120 1_555 B N PRO 121 B PRO 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale19 B C ILE 151 B ILE 151 1_555 B N MSE 152 B MSE 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale20 B C MSE 152 B MSE 152 1_555 B N ARG 153 B ARG 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale21 B C ILE 184 B ILE 184 1_555 B N MSE 185 B MSE 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale22 B C MSE 185 B MSE 185 1_555 B N GLU 186 B GLU 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale23 B C ARG 215 B ARG 215 1_555 B N MSE 216 B MSE 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale24 B C MSE 216 B MSE 216 1_555 B N ALA 217 B ALA 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 340 n n P O2 PO4 sing 341 n n P O3 PO4 sing 342 n n P O4 PO4 sing 343 n n # _atom_sites.entry_id 3TRI _atom_sites.fract_transf_matrix[1][1] 0.013261 _atom_sites.fract_transf_matrix[1][2] 0.007656 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015312 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005284 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 281 1 NAP NAP . D 3 PO4 A 1 282 1 PO4 PO4 . E 3 PO4 A 1 283 3 PO4 PO4 . F 3 PO4 A 1 284 4 PO4 PO4 . G 2 NAP B 1 281 2 NAP NAP . H 4 CL B 1 282 1 CL CL . I 3 PO4 B 1 283 2 PO4 PO4 . J 5 HOH A 1 285 6 HOH HOH . J 5 HOH A 2 286 7 HOH HOH . J 5 HOH A 3 287 9 HOH HOH . J 5 HOH A 4 288 15 HOH HOH . J 5 HOH A 5 289 16 HOH HOH . J 5 HOH A 6 290 19 HOH HOH . J 5 HOH A 7 291 25 HOH HOH . J 5 HOH A 8 292 26 HOH HOH . J 5 HOH A 9 293 27 HOH HOH . J 5 HOH A 10 294 28 HOH HOH . J 5 HOH A 11 295 30 HOH HOH . J 5 HOH A 12 296 32 HOH HOH . J 5 HOH A 13 297 33 HOH HOH . J 5 HOH A 14 298 37 HOH HOH . J 5 HOH A 15 299 38 HOH HOH . J 5 HOH A 16 300 40 HOH HOH . J 5 HOH A 17 301 41 HOH HOH . J 5 HOH A 18 302 42 HOH HOH . J 5 HOH A 19 303 46 HOH HOH . J 5 HOH A 20 304 48 HOH HOH . J 5 HOH A 21 305 52 HOH HOH . J 5 HOH A 22 306 53 HOH HOH . J 5 HOH A 23 307 56 HOH HOH . J 5 HOH A 24 308 57 HOH HOH . J 5 HOH A 25 309 58 HOH HOH . J 5 HOH A 26 310 60 HOH HOH . J 5 HOH A 27 311 62 HOH HOH . J 5 HOH A 28 312 63 HOH HOH . J 5 HOH A 29 313 66 HOH HOH . J 5 HOH A 30 314 67 HOH HOH . J 5 HOH A 31 315 68 HOH HOH . J 5 HOH A 32 316 74 HOH HOH . J 5 HOH A 33 317 77 HOH HOH . J 5 HOH A 34 318 78 HOH HOH . J 5 HOH A 35 319 79 HOH HOH . J 5 HOH A 36 320 80 HOH HOH . J 5 HOH A 37 321 83 HOH HOH . J 5 HOH A 38 322 85 HOH HOH . J 5 HOH A 39 323 87 HOH HOH . J 5 HOH A 40 324 88 HOH HOH . J 5 HOH A 41 325 91 HOH HOH . J 5 HOH A 42 326 97 HOH HOH . J 5 HOH A 43 327 98 HOH HOH . J 5 HOH A 44 328 99 HOH HOH . J 5 HOH A 45 329 100 HOH HOH . J 5 HOH A 46 330 101 HOH HOH . J 5 HOH A 47 331 102 HOH HOH . J 5 HOH A 48 332 103 HOH HOH . J 5 HOH A 49 333 105 HOH HOH . J 5 HOH A 50 334 108 HOH HOH . K 5 HOH B 1 284 1 HOH HOH . K 5 HOH B 2 285 2 HOH HOH . K 5 HOH B 3 286 3 HOH HOH . K 5 HOH B 4 287 4 HOH HOH . K 5 HOH B 5 288 5 HOH HOH . K 5 HOH B 6 289 8 HOH HOH . K 5 HOH B 7 290 10 HOH HOH . K 5 HOH B 8 291 11 HOH HOH . K 5 HOH B 9 292 12 HOH HOH . K 5 HOH B 10 293 13 HOH HOH . K 5 HOH B 11 294 14 HOH HOH . K 5 HOH B 12 295 17 HOH HOH . K 5 HOH B 13 296 18 HOH HOH . K 5 HOH B 14 297 20 HOH HOH . K 5 HOH B 15 298 21 HOH HOH . K 5 HOH B 16 299 22 HOH HOH . K 5 HOH B 17 300 23 HOH HOH . K 5 HOH B 18 301 24 HOH HOH . K 5 HOH B 19 302 29 HOH HOH . K 5 HOH B 20 303 31 HOH HOH . K 5 HOH B 21 304 34 HOH HOH . K 5 HOH B 22 305 35 HOH HOH . K 5 HOH B 23 306 36 HOH HOH . K 5 HOH B 24 307 39 HOH HOH . K 5 HOH B 25 308 43 HOH HOH . K 5 HOH B 26 309 44 HOH HOH . K 5 HOH B 27 310 45 HOH HOH . K 5 HOH B 28 311 47 HOH HOH . K 5 HOH B 29 312 49 HOH HOH . K 5 HOH B 30 313 50 HOH HOH . K 5 HOH B 31 314 51 HOH HOH . K 5 HOH B 32 315 54 HOH HOH . K 5 HOH B 33 316 55 HOH HOH . K 5 HOH B 34 317 59 HOH HOH . K 5 HOH B 35 318 61 HOH HOH . K 5 HOH B 36 319 64 HOH HOH . K 5 HOH B 37 320 65 HOH HOH . K 5 HOH B 38 321 69 HOH HOH . K 5 HOH B 39 322 70 HOH HOH . K 5 HOH B 40 323 71 HOH HOH . K 5 HOH B 41 324 72 HOH HOH . K 5 HOH B 42 325 73 HOH HOH . K 5 HOH B 43 326 75 HOH HOH . K 5 HOH B 44 327 76 HOH HOH . K 5 HOH B 45 328 81 HOH HOH . K 5 HOH B 46 329 82 HOH HOH . K 5 HOH B 47 330 84 HOH HOH . K 5 HOH B 48 331 86 HOH HOH . K 5 HOH B 49 332 89 HOH HOH . K 5 HOH B 50 333 90 HOH HOH . K 5 HOH B 51 334 92 HOH HOH . K 5 HOH B 52 335 93 HOH HOH . K 5 HOH B 53 336 94 HOH HOH . K 5 HOH B 54 337 95 HOH HOH . K 5 HOH B 55 338 96 HOH HOH . K 5 HOH B 56 339 104 HOH HOH . K 5 HOH B 57 340 106 HOH HOH . K 5 HOH B 58 341 107 HOH HOH . K 5 HOH B 59 342 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . I 3 42.225 2.254 28.198 0.95 100.24 ? P PO4 283 B 1 HETATM 2 O O1 PO4 . . . I 3 43.509 2.177 27.403 0.95 65.39 ? O1 PO4 283 B 1 HETATM 3 O O2 PO4 . . . I 3 41.189 3.008 27.395 0.95 78.15 ? O2 PO4 283 B 1 HETATM 4 O O3 PO4 . . . I 3 41.701 0.865 28.505 0.95 57.23 ? O3 PO4 283 B 1 HETATM 5 O O4 PO4 . . . I 3 42.508 2.992 29.486 0.95 62.1 ? O4 PO4 283 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #