data_3TRV # _model_server_result.job_id Wr610iy85I64N_3KnPuWwQ _model_server_result.datetime_utc '2024-11-18 11:55:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3trv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":36}' # _entry.id 3TRV # _exptl.entry_id 3TRV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 75.061 _cell.angle_beta 82.004 _cell.angle_gamma 87.558 _cell.entry_id 3TRV _cell.length_a 20.188 _cell.length_b 22.39 _cell.length_c 32.512 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TRV _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,H 1 1 B,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 16 A ALA 16 1_555 A N PF5 17 A PF5 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C PF5 17 A PF5 17 1_555 A N ALA 18 A ALA 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 B C DLE 1 B DLE 1 1_555 B N DSN 2 B DSN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 B C DSN 2 B DSN 2 1_555 B N DAS 3 B DAS 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale5 B C DAS 3 B DAS 3 1_555 B N DGL 4 B DGL 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 B C DGL 4 B DGL 4 1_555 B N DAS 5 B DAS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 B C DAS 5 B DAS 5 1_555 B N DPN 6 B DPN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale8 B C DPN 6 B DPN 6 1_555 B N DLY 7 B DLY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 B C DLY 7 B DLY 7 1_555 B N DAL 8 B DAL 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale10 B C DAL 8 B DAL 8 1_555 B N DVA 9 B DVA 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale11 B C DVA 9 B DVA 9 1_555 B N DPN 10 B DPN 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale12 B C DPN 10 B DPN 10 1_555 B N GLY 11 B GLY 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale13 B C GLY 11 B GLY 11 1_555 B N MED 12 B MED 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale14 B C DTH 13 B DTH 13 1_555 B N DAR 14 B DAR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale15 B C DAR 14 B DAR 14 1_555 B N DSN 15 B DSN 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale16 B C DSN 15 B DSN 15 1_555 B N DAL 16 B DAL 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale17 B C DAL 16 B DAL 16 1_555 B N DPN 17 B DPN 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale18 B C DPN 17 B DPN 17 1_555 B N DAL 18 B DAL 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale19 B C DAL 18 B DAL 18 1_555 B N DSG 19 B DSG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale20 B C DSG 19 B DSG 19 1_555 B N DLE 20 B DLE 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale21 B C DLE 20 B DLE 20 1_555 B N DPR 21 B DPR 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale22 B C DPR 21 B DPR 21 1_555 B N DLE 22 B DLE 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale23 B C DTR 23 B DTR 23 1_555 B N DLY 24 B DLY 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale24 B C DLY 24 B DLY 24 1_555 B N DGN 25 B DGN 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale25 B C DGN 25 B DGN 25 1_555 B N DGN 26 B DGN 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale26 B C DGN 26 B DGN 26 1_555 B N DHI 27 B DHI 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale27 B C DHI 27 B DHI 27 1_555 B N DLE 28 B DLE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale28 B C DLE 28 B DLE 28 1_555 B N DLY 29 B DLY 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale29 B C DLY 29 B DLY 29 1_555 B N DLY 30 B DLY 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale30 B C DLY 30 B DLY 30 1_555 B N DGL 31 B DGL 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale31 B C DGL 31 B DGL 31 1_555 B N DLY 32 B DLY 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale32 B C DLY 32 B DLY 32 1_555 B N GLY 33 B GLY 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale33 B C GLY 33 B GLY 33 1_555 B N DLE 34 B DLE 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale34 B C DLE 34 B DLE 34 1_555 B N DPN 35 B DPN 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 595 n n S O2 SO4 doub 596 n n S O3 SO4 sing 597 n n S O4 SO4 sing 598 n n # _atom_sites.entry_id 3TRV _atom_sites.fract_transf_matrix[1][1] 0.049534 _atom_sites.fract_transf_matrix[1][2] -0.002112 _atom_sites.fract_transf_matrix[1][3] -0.006639 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.044703 _atom_sites.fract_transf_matrix[2][3] -0.011768 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.032118 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 36 1 SO4 SO4 . D 3 SO4 A 1 37 2 SO4 SO4 . E 4 IPA A 1 38 1 IPA IPA . F 4 IPA A 1 39 1 IPA IPA . G 3 SO4 B 1 50 50 SO4 SO4 . H 5 HOH A 1 40 2 HOH HOH . H 5 HOH A 2 41 3 HOH HOH . H 5 HOH A 3 42 42 HOH HOH . H 5 HOH A 4 43 43 HOH HOH . H 5 HOH A 5 44 44 HOH HOH . H 5 HOH A 6 45 4 HOH HOH . H 5 HOH A 7 46 46 HOH HOH . H 5 HOH A 8 47 47 HOH HOH . H 5 HOH A 9 48 6 HOH HOH . H 5 HOH A 10 49 11 HOH HOH . H 5 HOH A 11 50 12 HOH HOH . H 5 HOH A 12 51 51 HOH HOH . H 5 HOH A 13 52 52 HOH HOH . H 5 HOH A 14 53 13 HOH HOH . H 5 HOH A 15 54 54 HOH HOH . H 5 HOH A 16 55 22 HOH HOH . H 5 HOH A 17 56 23 HOH HOH . H 5 HOH A 18 57 24 HOH HOH . H 5 HOH A 19 58 58 HOH HOH . H 5 HOH A 20 59 25 HOH HOH . H 5 HOH A 21 60 60 HOH HOH . H 5 HOH A 22 61 61 HOH HOH . H 5 HOH A 23 62 27 HOH HOH . H 5 HOH A 24 63 28 HOH HOH . H 5 HOH A 25 64 29 HOH HOH . H 5 HOH A 26 65 65 HOH HOH . H 5 HOH A 27 66 30 HOH HOH . H 5 HOH A 28 67 67 HOH HOH . H 5 HOH A 29 68 68 HOH HOH . H 5 HOH A 30 69 32 HOH HOH . H 5 HOH A 31 70 70 HOH HOH . H 5 HOH A 32 71 36 HOH HOH . H 5 HOH A 33 72 72 HOH HOH . H 5 HOH A 34 73 37 HOH HOH . H 5 HOH A 35 74 74 HOH HOH . H 5 HOH A 36 75 75 HOH HOH . H 5 HOH A 37 76 38 HOH HOH . H 5 HOH A 38 77 77 HOH HOH . H 5 HOH A 39 78 78 HOH HOH . H 5 HOH A 40 79 12 HOH HOH . H 5 HOH A 41 88 88 HOH HOH . H 5 HOH A 42 99 99 HOH HOH . H 5 HOH A 43 102 102 HOH HOH . H 5 HOH A 44 103 103 HOH HOH . H 5 HOH A 45 104 104 HOH HOH . H 5 HOH A 46 105 105 HOH HOH . I 5 HOH B 1 36 1 HOH HOH . I 5 HOH B 2 37 5 HOH HOH . I 5 HOH B 3 38 7 HOH HOH . I 5 HOH B 4 39 8 HOH HOH . I 5 HOH B 5 40 40 HOH HOH . I 5 HOH B 6 41 41 HOH HOH . I 5 HOH B 7 42 9 HOH HOH . I 5 HOH B 8 43 10 HOH HOH . I 5 HOH B 9 44 14 HOH HOH . I 5 HOH B 10 45 15 HOH HOH . I 5 HOH B 11 46 46 HOH HOH . I 5 HOH B 12 47 47 HOH HOH . I 5 HOH B 13 48 48 HOH HOH . I 5 HOH B 14 49 49 HOH HOH . I 5 HOH B 15 51 51 HOH HOH . I 5 HOH B 16 52 16 HOH HOH . I 5 HOH B 17 53 17 HOH HOH . I 5 HOH B 18 54 18 HOH HOH . I 5 HOH B 19 55 19 HOH HOH . I 5 HOH B 20 56 20 HOH HOH . I 5 HOH B 21 57 57 HOH HOH . I 5 HOH B 22 58 21 HOH HOH . I 5 HOH B 23 59 59 HOH HOH . I 5 HOH B 24 60 26 HOH HOH . I 5 HOH B 25 61 31 HOH HOH . I 5 HOH B 26 62 62 HOH HOH . I 5 HOH B 27 63 63 HOH HOH . I 5 HOH B 28 64 33 HOH HOH . I 5 HOH B 29 65 35 HOH HOH . I 5 HOH B 30 66 50 HOH HOH . I 5 HOH B 31 67 1 HOH HOH . I 5 HOH B 32 68 3 HOH HOH . I 5 HOH B 33 69 69 HOH HOH . I 5 HOH B 34 70 8 HOH HOH . I 5 HOH B 35 71 15 HOH HOH . I 5 HOH B 36 80 80 HOH HOH . I 5 HOH B 37 81 81 HOH HOH . I 5 HOH B 38 97 97 HOH HOH . I 5 HOH B 39 98 98 HOH HOH . I 5 HOH B 40 101 101 HOH HOH . I 5 HOH B 41 106 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 5.062 -9.857 1.076 0.5 8.92 ? S SO4 36 A 1 HETATM 2 O O1 SO4 . . . C 3 5.588 -10.537 -0.121 0.5 11.53 ? O1 SO4 36 A 1 HETATM 3 O O2 SO4 . . . C 3 3.728 -9.267 0.809 0.5 9.61 ? O2 SO4 36 A 1 HETATM 4 O O3 SO4 . . . C 3 4.92 -10.799 2.203 0.5 9.25 ? O3 SO4 36 A 1 HETATM 5 O O4 SO4 . . . C 3 5.973 -8.771 1.496 0.5 12.47 ? O4 SO4 36 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #