data_3TS5 # _model_server_result.job_id Si_BEFYmS1RvVvJHwIWnpQ _model_server_result.datetime_utc '2024-10-18 18:24:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ts5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":162}' # _entry.id 3TS5 # _exptl.entry_id 3TS5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 77.33 _cell.angle_beta 85.99 _cell.angle_gamma 73.65 _cell.entry_id 3TS5 _cell.length_a 50.811 _cell.length_b 68.775 _cell.length_c 79.418 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TS5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,K,L,M 1 1 D,E,F,I,J,N,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD2 ASP 33 B ASP 33 1_555 G MG MG . B MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc2 B O PHE 39 B PHE 39 1_555 G MG MG . B MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc3 B OD2 ASP 44 B ASP 44 1_555 G MG MG . B MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc4 C OD1 ASP 19 C ASP 19 1_555 H CA CA . C CA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc5 C O ASP 19 C ASP 19 1_555 H CA CA . C CA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? metalc ? metalc6 C OD2 ASP 22 C ASP 22 1_555 H CA CA . C CA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc7 C O GLY 23 C GLY 23 1_555 H CA CA . C CA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc8 C OD1 ASP 25 C ASP 25 1_555 H CA CA . C CA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc9 C O ALA 27 C ALA 27 1_555 H CA CA . C CA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc10 H CA CA . C CA 157 1_555 M O HOH . C HOH 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc11 E OD1 ASP 33 E ASP 33 1_555 I MG MG . E MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc12 E OD1 ASN 35 E ASN 35 1_555 I MG MG . E MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? metalc ? metalc13 E OD2 ASP 37 E ASP 37 1_555 I MG MG . E MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc14 E O PHE 39 E PHE 39 1_555 I MG MG . E MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc15 E OD2 ASP 44 E ASP 44 1_555 I MG MG . E MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc16 F O ASP 19 F ASP 19 1_555 J CA CA . F CA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc17 F OD1 ASP 19 F ASP 19 1_555 J CA CA . F CA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc18 F OD1 ASP 22 F ASP 22 1_555 J CA CA . F CA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc19 F O GLY 23 F GLY 23 1_555 J CA CA . F CA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc20 F OD1 ASP 25 F ASP 25 1_555 J CA CA . F CA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc21 F O ALA 27 F ALA 27 1_555 J CA CA . F CA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc22 J CA CA . F CA 157 1_555 P O HOH . F HOH 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3TS5 _atom_sites.fract_transf_matrix[1][1] 0.019681 _atom_sites.fract_transf_matrix[1][2] -0.005774 _atom_sites.fract_transf_matrix[1][3] -0.000179 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015153 _atom_sites.fract_transf_matrix[2][3] -0.003232 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012906 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 MG B 1 162 1 MG MG . H 5 CA C 1 157 1 CA CA . I 4 MG E 1 162 1 MG MG . J 5 CA F 1 157 1 CA CA . K 6 HOH A 1 1 1 HOH HOH . K 6 HOH A 2 13 13 HOH HOH . K 6 HOH A 3 14 14 HOH HOH . K 6 HOH A 4 15 15 HOH HOH . K 6 HOH A 5 16 16 HOH HOH . K 6 HOH A 6 17 17 HOH HOH . K 6 HOH A 7 24 24 HOH HOH . K 6 HOH A 8 25 25 HOH HOH . K 6 HOH A 9 30 30 HOH HOH . K 6 HOH A 10 60 60 HOH HOH . K 6 HOH A 11 61 61 HOH HOH . K 6 HOH A 12 112 112 HOH HOH . K 6 HOH A 13 124 124 HOH HOH . K 6 HOH A 14 136 136 HOH HOH . K 6 HOH A 15 140 140 HOH HOH . K 6 HOH A 16 149 149 HOH HOH . K 6 HOH A 17 191 191 HOH HOH . K 6 HOH A 18 197 197 HOH HOH . K 6 HOH A 19 199 199 HOH HOH . K 6 HOH A 20 202 202 HOH HOH . K 6 HOH A 21 211 211 HOH HOH . K 6 HOH A 22 214 214 HOH HOH . K 6 HOH A 23 224 224 HOH HOH . K 6 HOH A 24 226 226 HOH HOH . L 6 HOH B 1 163 19 HOH HOH . L 6 HOH B 2 164 20 HOH HOH . L 6 HOH B 3 165 165 HOH HOH . L 6 HOH B 4 166 21 HOH HOH . L 6 HOH B 5 167 22 HOH HOH . L 6 HOH B 6 168 168 HOH HOH . L 6 HOH B 7 169 23 HOH HOH . L 6 HOH B 8 170 26 HOH HOH . L 6 HOH B 9 171 171 HOH HOH . L 6 HOH B 10 172 29 HOH HOH . L 6 HOH B 11 173 31 HOH HOH . L 6 HOH B 12 174 174 HOH HOH . L 6 HOH B 13 175 32 HOH HOH . L 6 HOH B 14 176 36 HOH HOH . L 6 HOH B 15 177 38 HOH HOH . L 6 HOH B 16 178 47 HOH HOH . L 6 HOH B 17 179 48 HOH HOH . L 6 HOH B 18 180 180 HOH HOH . L 6 HOH B 19 181 49 HOH HOH . L 6 HOH B 20 182 50 HOH HOH . L 6 HOH B 21 183 51 HOH HOH . L 6 HOH B 22 184 52 HOH HOH . L 6 HOH B 23 185 53 HOH HOH . L 6 HOH B 24 186 186 HOH HOH . L 6 HOH B 25 187 54 HOH HOH . L 6 HOH B 26 188 188 HOH HOH . L 6 HOH B 27 189 189 HOH HOH . L 6 HOH B 28 190 55 HOH HOH . L 6 HOH B 29 191 56 HOH HOH . L 6 HOH B 30 192 57 HOH HOH . L 6 HOH B 31 193 193 HOH HOH . L 6 HOH B 32 194 194 HOH HOH . L 6 HOH B 33 195 58 HOH HOH . L 6 HOH B 34 196 62 HOH HOH . L 6 HOH B 35 197 63 HOH HOH . L 6 HOH B 36 198 64 HOH HOH . L 6 HOH B 37 199 65 HOH HOH . L 6 HOH B 38 200 200 HOH HOH . L 6 HOH B 39 201 66 HOH HOH . L 6 HOH B 40 202 67 HOH HOH . L 6 HOH B 41 203 78 HOH HOH . L 6 HOH B 42 204 204 HOH HOH . L 6 HOH B 43 205 205 HOH HOH . L 6 HOH B 44 206 85 HOH HOH . L 6 HOH B 45 207 91 HOH HOH . L 6 HOH B 46 208 100 HOH HOH . L 6 HOH B 47 209 117 HOH HOH . L 6 HOH B 48 210 127 HOH HOH . L 6 HOH B 49 211 135 HOH HOH . L 6 HOH B 50 212 141 HOH HOH . L 6 HOH B 51 213 147 HOH HOH . L 6 HOH B 52 214 152 HOH HOH . L 6 HOH B 53 215 158 HOH HOH . L 6 HOH B 54 216 160 HOH HOH . L 6 HOH B 55 217 217 HOH HOH . L 6 HOH B 56 221 221 HOH HOH . L 6 HOH B 57 223 223 HOH HOH . L 6 HOH B 58 227 227 HOH HOH . M 6 HOH C 1 158 2 HOH HOH . M 6 HOH C 2 159 3 HOH HOH . M 6 HOH C 3 160 4 HOH HOH . M 6 HOH C 4 161 5 HOH HOH . M 6 HOH C 5 162 6 HOH HOH . M 6 HOH C 6 163 7 HOH HOH . M 6 HOH C 7 164 164 HOH HOH . M 6 HOH C 8 165 8 HOH HOH . M 6 HOH C 9 166 9 HOH HOH . M 6 HOH C 10 167 10 HOH HOH . M 6 HOH C 11 168 11 HOH HOH . M 6 HOH C 12 169 12 HOH HOH . M 6 HOH C 13 170 18 HOH HOH . M 6 HOH C 14 171 59 HOH HOH . M 6 HOH C 15 172 172 HOH HOH . M 6 HOH C 16 173 68 HOH HOH . M 6 HOH C 17 174 69 HOH HOH . M 6 HOH C 18 175 175 HOH HOH . M 6 HOH C 19 176 70 HOH HOH . M 6 HOH C 20 177 177 HOH HOH . M 6 HOH C 21 178 178 HOH HOH . M 6 HOH C 22 179 71 HOH HOH . M 6 HOH C 23 180 72 HOH HOH . M 6 HOH C 24 181 73 HOH HOH . M 6 HOH C 25 182 182 HOH HOH . M 6 HOH C 26 183 74 HOH HOH . M 6 HOH C 27 184 75 HOH HOH . M 6 HOH C 28 185 76 HOH HOH . M 6 HOH C 29 186 77 HOH HOH . M 6 HOH C 30 187 187 HOH HOH . M 6 HOH C 31 188 79 HOH HOH . M 6 HOH C 32 189 80 HOH HOH . M 6 HOH C 33 190 84 HOH HOH . M 6 HOH C 34 191 87 HOH HOH . M 6 HOH C 35 192 192 HOH HOH . M 6 HOH C 36 193 92 HOH HOH . M 6 HOH C 37 194 94 HOH HOH . M 6 HOH C 38 195 95 HOH HOH . M 6 HOH C 39 196 97 HOH HOH . M 6 HOH C 40 197 99 HOH HOH . M 6 HOH C 41 198 102 HOH HOH . M 6 HOH C 42 199 103 HOH HOH . M 6 HOH C 43 200 104 HOH HOH . M 6 HOH C 44 201 201 HOH HOH . M 6 HOH C 45 202 107 HOH HOH . M 6 HOH C 46 203 111 HOH HOH . M 6 HOH C 47 204 113 HOH HOH . M 6 HOH C 48 205 116 HOH HOH . M 6 HOH C 49 206 122 HOH HOH . M 6 HOH C 50 207 125 HOH HOH . M 6 HOH C 51 208 208 HOH HOH . M 6 HOH C 52 209 209 HOH HOH . M 6 HOH C 53 210 210 HOH HOH . M 6 HOH C 54 211 126 HOH HOH . M 6 HOH C 55 212 212 HOH HOH . M 6 HOH C 56 213 128 HOH HOH . M 6 HOH C 57 214 130 HOH HOH . M 6 HOH C 58 215 139 HOH HOH . M 6 HOH C 59 216 142 HOH HOH . M 6 HOH C 60 217 154 HOH HOH . M 6 HOH C 61 218 218 HOH HOH . M 6 HOH C 62 219 219 HOH HOH . M 6 HOH C 63 220 220 HOH HOH . M 6 HOH C 64 221 156 HOH HOH . M 6 HOH C 65 222 157 HOH HOH . N 6 HOH D 1 86 86 HOH HOH . N 6 HOH D 2 88 88 HOH HOH . N 6 HOH D 3 89 89 HOH HOH . N 6 HOH D 4 105 105 HOH HOH . N 6 HOH D 5 138 138 HOH HOH . N 6 HOH D 6 144 144 HOH HOH . N 6 HOH D 7 145 145 HOH HOH . N 6 HOH D 8 150 150 HOH HOH . N 6 HOH D 9 151 151 HOH HOH . N 6 HOH D 10 184 184 HOH HOH . N 6 HOH D 11 190 190 HOH HOH . N 6 HOH D 12 203 203 HOH HOH . N 6 HOH D 13 213 213 HOH HOH . N 6 HOH D 14 215 215 HOH HOH . N 6 HOH D 15 216 216 HOH HOH . N 6 HOH D 16 225 225 HOH HOH . O 6 HOH E 1 163 163 HOH HOH . O 6 HOH E 2 164 90 HOH HOH . O 6 HOH E 3 165 96 HOH HOH . O 6 HOH E 4 166 98 HOH HOH . O 6 HOH E 5 167 167 HOH HOH . O 6 HOH E 6 168 114 HOH HOH . O 6 HOH E 7 169 118 HOH HOH . O 6 HOH E 8 170 170 HOH HOH . O 6 HOH E 9 171 120 HOH HOH . O 6 HOH E 10 172 129 HOH HOH . O 6 HOH E 11 173 173 HOH HOH . O 6 HOH E 12 174 133 HOH HOH . O 6 HOH E 13 175 137 HOH HOH . O 6 HOH E 14 176 176 HOH HOH . O 6 HOH E 15 177 162 HOH HOH . O 6 HOH E 16 181 181 HOH HOH . O 6 HOH E 17 183 183 HOH HOH . O 6 HOH E 18 195 195 HOH HOH . O 6 HOH E 19 196 196 HOH HOH . O 6 HOH E 20 206 206 HOH HOH . P 6 HOH F 1 158 27 HOH HOH . P 6 HOH F 2 159 28 HOH HOH . P 6 HOH F 3 160 33 HOH HOH . P 6 HOH F 4 161 161 HOH HOH . P 6 HOH F 5 162 34 HOH HOH . P 6 HOH F 6 163 37 HOH HOH . P 6 HOH F 7 164 39 HOH HOH . P 6 HOH F 8 165 40 HOH HOH . P 6 HOH F 9 166 166 HOH HOH . P 6 HOH F 10 167 41 HOH HOH . P 6 HOH F 11 168 42 HOH HOH . P 6 HOH F 12 169 169 HOH HOH . P 6 HOH F 13 170 43 HOH HOH . P 6 HOH F 14 171 44 HOH HOH . P 6 HOH F 15 172 45 HOH HOH . P 6 HOH F 16 173 46 HOH HOH . P 6 HOH F 17 174 81 HOH HOH . P 6 HOH F 18 175 82 HOH HOH . P 6 HOH F 19 176 93 HOH HOH . P 6 HOH F 20 177 101 HOH HOH . P 6 HOH F 21 178 106 HOH HOH . P 6 HOH F 22 179 179 HOH HOH . P 6 HOH F 23 180 108 HOH HOH . P 6 HOH F 24 181 109 HOH HOH . P 6 HOH F 25 182 110 HOH HOH . P 6 HOH F 26 183 115 HOH HOH . P 6 HOH F 27 184 123 HOH HOH . P 6 HOH F 28 185 185 HOH HOH . P 6 HOH F 29 186 134 HOH HOH . P 6 HOH F 30 187 146 HOH HOH . P 6 HOH F 31 188 148 HOH HOH . P 6 HOH F 32 198 198 HOH HOH . P 6 HOH F 33 207 207 HOH HOH . P 6 HOH F 34 222 222 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x 12.22 _atom_site.Cartn_y -56.291 _atom_site.Cartn_z 15.685 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 162 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #