data_3TT3
#
_model_server_result.job_id            EUJdE3_7Y9FQzxuFuOsQeg 
_model_server_result.datetime_utc      '2024-10-14 13:26:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3tt3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":520}' 
#
_entry.id    3TT3 
#
_exptl.entry_id    3TT3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              308.434 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'octyl 1-thio-beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3TT3 
_cell.length_a            128.838 
_cell.length_b            169.804 
_cell.length_c            130.417 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TT3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 23 L CYS 23 1_555 B SG CYS 92 L CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf2 B SG CYS 138 L CYS 138 1_555 B SG CYS 198 L CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 C SG CYS 146 H CYS 146 1_555 C SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
#
_chem_comp.formula           'C14 H28 O5 S' 
_chem_comp.formula_weight    308.434 
_chem_comp.id                SOG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'octyl 1-thio-beta-D-glucopyranoside' 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     '2-HYDROXYMETHYL-6-OCTYLSULFANYL-TETRAHYDRO-PYRAN-3,4,5-TRIOL;1-S-OCTYL-BETA-D-THIOGLUCOSIDE;octyl 1-thio-beta-D-glucoside;octyl 1-thio-D-glucoside;octyl 1-thio-glucoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 SOG sing 288 n n 
C1 S1 SOG sing 289 n n 
C1 O5 SOG sing 290 n n 
C1 H1 SOG sing 291 n n 
C2 C3 SOG sing 292 n n 
C2 O2 SOG sing 293 n n 
C2 H2 SOG sing 294 n n 
C3 C4 SOG sing 295 n n 
C3 O3 SOG sing 296 n n 
C3 H3 SOG sing 297 n n 
C4 C5 SOG sing 298 n n 
C4 O4 SOG sing 299 n n 
C4 H4 SOG sing 300 n n 
C5 C6 SOG sing 301 n n 
C5 O5 SOG sing 302 n n 
C5 H5 SOG sing 303 n n 
C6 O6 SOG sing 304 n n 
C6 H61 SOG sing 305 n n 
C6 H62 SOG sing 306 n n 
C1' C2' SOG sing 307 n n 
C1' S1 SOG sing 308 n n 
C1' "H1'1" SOG sing 309 n n 
C1' "H1'2" SOG sing 310 n n 
C2' C3' SOG sing 311 n n 
C2' "H2'1" SOG sing 312 n n 
C2' "H2'2" SOG sing 313 n n 
C3' C4' SOG sing 314 n n 
C3' "H3'1" SOG sing 315 n n 
C3' "H3'2" SOG sing 316 n n 
C4' C5' SOG sing 317 n n 
C4' "H4'1" SOG sing 318 n n 
C4' "H4'2" SOG sing 319 n n 
C5' C6' SOG sing 320 n n 
C5' "H5'1" SOG sing 321 n n 
C5' "H5'2" SOG sing 322 n n 
C6' C7' SOG sing 323 n n 
C6' "H6'1" SOG sing 324 n n 
C6' "H6'2" SOG sing 325 n n 
C7' C8' SOG sing 326 n n 
C7' "H7'1" SOG sing 327 n n 
C7' "H7'2" SOG sing 328 n n 
C8' "H8'1" SOG sing 329 n n 
C8' "H8'2" SOG sing 330 n n 
C8' "H8'3" SOG sing 331 n n 
O2 HO2 SOG sing 332 n n 
O3 HO3 SOG sing 333 n n 
O4 HO4 SOG sing 334 n n 
O6 HO6 SOG sing 335 n n 
#
_atom_sites.entry_id                     3TT3 
_atom_sites.fract_transf_matrix[1][1]    0.007762 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005889 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007668 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          D 
_pdbx_nonpoly_scheme.entity_id        4 
_pdbx_nonpoly_scheme.mon_id           SOG 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      520 
_pdbx_nonpoly_scheme.auth_seq_num     1 
_pdbx_nonpoly_scheme.pdb_mon_id       SOG 
_pdbx_nonpoly_scheme.auth_mon_id      SOG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1' SOG . . . D 4 87.593 88.927 68.541 1 84.45 ? C1' SOG 520 A 1 
HETATM 2 C C2' SOG . . . D 4 88.56 88.218 67.655 1 99.85 ? C2' SOG 520 A 1 
HETATM 3 C C3' SOG . . . D 4 89.9 88.091 68.304 1 112 ? C3' SOG 520 A 1 
HETATM 4 C C4' SOG . . . D 4 90.795 87.333 67.381 1 125.92 ? C4' SOG 520 A 1 
HETATM 5 C C5' SOG . . . D 4 92.199 87.284 67.887 1 136.56 ? C5' SOG 520 A 1 
HETATM 6 C C6' SOG . . . D 4 92.973 86.303 67.065 1 144.15 ? C6' SOG 520 A 1 
HETATM 7 C C7' SOG . . . D 4 94.377 86.202 67.56 1 131.71 ? C7' SOG 520 A 1 
HETATM 8 C C8' SOG . . . D 4 95.123 85.182 66.766 1 107.15 ? C8' SOG 520 A 1 
#
_model_server_stats.io_time_ms              136 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           342 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#