data_3TT7 # _model_server_result.job_id Cq1YbyN0bTjyLOCj03_oWg _model_server_result.datetime_utc '2025-02-05 12:03:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tt7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":300}' # _entry.id 3TT7 # _exptl.entry_id 3TT7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 166.155 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIISOPROPYL PHOSPHONATE' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.21 _cell.angle_gamma 90 _cell.entry_id 3TT7 _cell.length_a 122.337 _cell.length_b 152 _cell.length_c 110.067 _cell.Z_PDB 28 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TT7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetradecameric _pdbx_struct_assembly.oligomeric_count 14 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -43.37766 0 101.1589 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 98 A SER 97 1_555 H P DFP . A DFP 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.601 ? covale ? covale2 B OG SER 98 B SER 97 1_555 I P DFP . B DFP 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.622 ? covale ? covale3 C OG SER 98 C SER 97 1_555 J P DFP . C DFP 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.588 ? covale ? covale4 D OG SER 98 D SER 97 1_555 K P DFP . D DFP 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.601 ? covale ? covale5 E OG SER 98 E SER 97 1_555 L P DFP . E DFP 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.627 ? covale ? covale6 F OG SER 98 F SER 97 1_555 M P DFP . F DFP 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.609 ? covale ? covale7 G OG SER 98 G SER 97 1_555 N P DFP . G DFP 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.598 ? # _chem_comp.formula 'C6 H15 O3 P' _chem_comp.formula_weight 166.155 _chem_comp.id DFP _chem_comp.mon_nstd_flag . _chem_comp.name 'DIISOPROPYL PHOSPHONATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DFP sing 83 n n C1 C3 DFP sing 84 n n C1 O1P DFP sing 85 n n C1 H1 DFP sing 86 n n C2 H21 DFP sing 87 n n C2 H22 DFP sing 88 n n C2 H23 DFP sing 89 n n C3 H31 DFP sing 90 n n C3 H32 DFP sing 91 n n C3 H33 DFP sing 92 n n C1' C2' DFP sing 93 n n C1' C3' DFP sing 94 n n C1' O2P DFP sing 95 n n C1' H1' DFP sing 96 n n C2' "H2'1" DFP sing 97 n n C2' "H2'2" DFP sing 98 n n C2' "H2'3" DFP sing 99 n n C3' "H3'1" DFP sing 100 n n C3' "H3'2" DFP sing 101 n n C3' "H3'3" DFP sing 102 n n P O1P DFP sing 103 n n P O2P DFP sing 104 n n P O3P DFP doub 105 n n HP1 P DFP sing 106 n n # _atom_sites.entry_id 3TT7 _atom_sites.fract_transf_matrix[1][1] 0.008174 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003504 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006579 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009885 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 2 DFP A 1 300 300 DFP DFP . I 2 DFP B 1 300 300 DFP DFP . J 2 DFP C 1 300 300 DFP DFP . K 2 DFP D 1 300 300 DFP DFP . L 2 DFP E 1 300 300 DFP DFP . M 2 DFP F 1 300 300 DFP DFP . N 2 DFP G 1 300 300 DFP DFP . O 3 HOH A 1 197 2 HOH HOH . O 3 HOH A 2 198 3 HOH HOH . O 3 HOH A 3 199 5 HOH HOH . O 3 HOH A 4 200 6 HOH HOH . O 3 HOH A 5 201 10 HOH HOH . O 3 HOH A 6 202 19 HOH HOH . O 3 HOH A 7 203 32 HOH HOH . O 3 HOH A 8 204 34 HOH HOH . O 3 HOH A 9 205 41 HOH HOH . O 3 HOH A 10 206 43 HOH HOH . O 3 HOH A 11 207 47 HOH HOH . O 3 HOH A 12 208 52 HOH HOH . O 3 HOH A 13 209 63 HOH HOH . O 3 HOH A 14 210 66 HOH HOH . O 3 HOH A 15 211 79 HOH HOH . O 3 HOH A 16 212 81 HOH HOH . O 3 HOH A 17 213 94 HOH HOH . O 3 HOH A 18 214 103 HOH HOH . O 3 HOH A 19 215 105 HOH HOH . O 3 HOH A 20 216 106 HOH HOH . O 3 HOH A 21 217 119 HOH HOH . O 3 HOH A 22 218 127 HOH HOH . O 3 HOH A 23 219 130 HOH HOH . O 3 HOH A 24 220 141 HOH HOH . O 3 HOH A 25 221 146 HOH HOH . O 3 HOH A 26 222 168 HOH HOH . O 3 HOH A 27 223 172 HOH HOH . O 3 HOH A 28 224 26 HOH HOH . P 3 HOH B 1 197 16 HOH HOH . P 3 HOH B 2 198 20 HOH HOH . P 3 HOH B 3 199 22 HOH HOH . P 3 HOH B 4 200 27 HOH HOH . P 3 HOH B 5 201 36 HOH HOH . P 3 HOH B 6 202 38 HOH HOH . P 3 HOH B 7 203 46 HOH HOH . P 3 HOH B 8 204 51 HOH HOH . P 3 HOH B 9 205 56 HOH HOH . P 3 HOH B 10 206 62 HOH HOH . P 3 HOH B 11 207 70 HOH HOH . P 3 HOH B 12 208 72 HOH HOH . P 3 HOH B 13 209 82 HOH HOH . P 3 HOH B 14 210 83 HOH HOH . P 3 HOH B 15 211 91 HOH HOH . P 3 HOH B 16 212 92 HOH HOH . P 3 HOH B 17 213 96 HOH HOH . P 3 HOH B 18 214 99 HOH HOH . P 3 HOH B 19 215 100 HOH HOH . P 3 HOH B 20 216 108 HOH HOH . P 3 HOH B 21 217 112 HOH HOH . P 3 HOH B 22 218 114 HOH HOH . P 3 HOH B 23 219 115 HOH HOH . P 3 HOH B 24 220 118 HOH HOH . P 3 HOH B 25 221 121 HOH HOH . P 3 HOH B 26 222 122 HOH HOH . P 3 HOH B 27 223 128 HOH HOH . P 3 HOH B 28 224 131 HOH HOH . P 3 HOH B 29 225 145 HOH HOH . P 3 HOH B 30 226 147 HOH HOH . P 3 HOH B 31 227 151 HOH HOH . P 3 HOH B 32 228 153 HOH HOH . P 3 HOH B 33 229 154 HOH HOH . P 3 HOH B 34 230 156 HOH HOH . P 3 HOH B 35 231 165 HOH HOH . Q 3 HOH C 1 197 23 HOH HOH . Q 3 HOH C 2 198 49 HOH HOH . Q 3 HOH C 3 199 61 HOH HOH . Q 3 HOH C 4 200 68 HOH HOH . Q 3 HOH C 5 201 73 HOH HOH . Q 3 HOH C 6 202 75 HOH HOH . Q 3 HOH C 7 203 78 HOH HOH . Q 3 HOH C 8 204 88 HOH HOH . Q 3 HOH C 9 205 95 HOH HOH . Q 3 HOH C 10 206 123 HOH HOH . Q 3 HOH C 11 207 124 HOH HOH . Q 3 HOH C 12 208 138 HOH HOH . Q 3 HOH C 13 209 139 HOH HOH . Q 3 HOH C 14 210 143 HOH HOH . Q 3 HOH C 15 211 148 HOH HOH . Q 3 HOH C 16 212 167 HOH HOH . Q 3 HOH C 17 213 173 HOH HOH . R 3 HOH D 1 197 9 HOH HOH . R 3 HOH D 2 198 11 HOH HOH . R 3 HOH D 3 199 24 HOH HOH . R 3 HOH D 4 201 30 HOH HOH . R 3 HOH D 5 202 37 HOH HOH . R 3 HOH D 6 203 40 HOH HOH . R 3 HOH D 7 204 44 HOH HOH . R 3 HOH D 8 205 55 HOH HOH . R 3 HOH D 9 206 58 HOH HOH . R 3 HOH D 10 207 60 HOH HOH . R 3 HOH D 11 208 67 HOH HOH . R 3 HOH D 12 209 69 HOH HOH . R 3 HOH D 13 210 85 HOH HOH . R 3 HOH D 14 211 93 HOH HOH . R 3 HOH D 15 212 98 HOH HOH . R 3 HOH D 16 213 102 HOH HOH . R 3 HOH D 17 214 113 HOH HOH . R 3 HOH D 18 215 120 HOH HOH . R 3 HOH D 19 216 135 HOH HOH . R 3 HOH D 20 217 150 HOH HOH . R 3 HOH D 21 218 152 HOH HOH . R 3 HOH D 22 219 155 HOH HOH . R 3 HOH D 23 220 160 HOH HOH . R 3 HOH D 24 221 162 HOH HOH . R 3 HOH D 25 222 163 HOH HOH . R 3 HOH D 26 223 171 HOH HOH . R 3 HOH D 27 224 176 HOH HOH . S 3 HOH E 1 197 1 HOH HOH . S 3 HOH E 2 198 8 HOH HOH . S 3 HOH E 3 199 12 HOH HOH . S 3 HOH E 4 200 28 HOH HOH . S 3 HOH E 5 201 31 HOH HOH . S 3 HOH E 6 202 33 HOH HOH . S 3 HOH E 7 203 39 HOH HOH . S 3 HOH E 8 204 45 HOH HOH . S 3 HOH E 9 205 53 HOH HOH . S 3 HOH E 10 206 54 HOH HOH . S 3 HOH E 11 207 77 HOH HOH . S 3 HOH E 12 208 86 HOH HOH . S 3 HOH E 13 209 89 HOH HOH . S 3 HOH E 14 210 90 HOH HOH . S 3 HOH E 15 211 132 HOH HOH . S 3 HOH E 16 212 134 HOH HOH . S 3 HOH E 17 213 137 HOH HOH . S 3 HOH E 18 214 142 HOH HOH . S 3 HOH E 19 215 161 HOH HOH . S 3 HOH E 20 216 175 HOH HOH . T 3 HOH F 1 197 4 HOH HOH . T 3 HOH F 2 198 15 HOH HOH . T 3 HOH F 3 199 18 HOH HOH . T 3 HOH F 4 200 42 HOH HOH . T 3 HOH F 5 201 71 HOH HOH . T 3 HOH F 6 202 80 HOH HOH . T 3 HOH F 7 203 84 HOH HOH . T 3 HOH F 8 204 107 HOH HOH . T 3 HOH F 9 205 109 HOH HOH . T 3 HOH F 10 206 125 HOH HOH . T 3 HOH F 11 207 126 HOH HOH . T 3 HOH F 12 208 133 HOH HOH . T 3 HOH F 13 209 136 HOH HOH . T 3 HOH F 14 210 157 HOH HOH . T 3 HOH F 15 211 164 HOH HOH . U 3 HOH G 1 197 7 HOH HOH . U 3 HOH G 2 198 13 HOH HOH . U 3 HOH G 3 199 14 HOH HOH . U 3 HOH G 4 200 17 HOH HOH . U 3 HOH G 5 201 21 HOH HOH . U 3 HOH G 6 202 25 HOH HOH . U 3 HOH G 7 203 29 HOH HOH . U 3 HOH G 8 204 35 HOH HOH . U 3 HOH G 9 205 48 HOH HOH . U 3 HOH G 10 206 50 HOH HOH . U 3 HOH G 11 207 57 HOH HOH . U 3 HOH G 12 208 59 HOH HOH . U 3 HOH G 13 209 64 HOH HOH . U 3 HOH G 14 210 65 HOH HOH . U 3 HOH G 15 211 74 HOH HOH . U 3 HOH G 16 212 76 HOH HOH . U 3 HOH G 17 213 87 HOH HOH . U 3 HOH G 18 214 97 HOH HOH . U 3 HOH G 19 215 101 HOH HOH . U 3 HOH G 20 216 104 HOH HOH . U 3 HOH G 21 217 110 HOH HOH . U 3 HOH G 22 218 111 HOH HOH . U 3 HOH G 23 219 116 HOH HOH . U 3 HOH G 24 220 117 HOH HOH . U 3 HOH G 25 221 129 HOH HOH . U 3 HOH G 26 222 140 HOH HOH . U 3 HOH G 27 223 144 HOH HOH . U 3 HOH G 28 224 149 HOH HOH . U 3 HOH G 29 225 158 HOH HOH . U 3 HOH G 30 226 159 HOH HOH . U 3 HOH G 31 227 166 HOH HOH . U 3 HOH G 32 228 169 HOH HOH . U 3 HOH G 33 229 170 HOH HOH . U 3 HOH G 34 230 174 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DFP . . . L 2 7.152 -21.668 39.882 1 51.21 ? C1 DFP 300 E 1 HETATM 2 C C2 DFP . . . L 2 8.451 -21.587 40.731 1 40.71 ? C2 DFP 300 E 1 HETATM 3 C C3 DFP . . . L 2 7.489 -22.181 38.481 1 44.09 ? C3 DFP 300 E 1 HETATM 4 C C1' DFP . . . L 2 3.253 -24.712 41.847 1 56.66 ? C1' DFP 300 E 1 HETATM 5 C C2' DFP . . . L 2 1.929 -24.448 41.078 1 47.11 ? C2' DFP 300 E 1 HETATM 6 C C3' DFP . . . L 2 3.867 -26.112 41.587 1 43.25 ? C3' DFP 300 E 1 HETATM 7 P P DFP . . . L 2 4.535 -22.936 40.086 1 77.1 ? P DFP 300 E 1 HETATM 8 O O1P DFP . . . L 2 6.104 -22.442 40.572 1 57.52 ? O1P DFP 300 E 1 HETATM 9 O O2P DFP . . . L 2 4.217 -23.686 41.541 1 51.43 ? O2P DFP 300 E 1 HETATM 10 O O3P DFP . . . L 2 4.339 -23.798 38.877 1 57.11 ? O3P DFP 300 E 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #