data_3TWX # _model_server_result.job_id g7LWNyGyO5laljl-XPkMcA _model_server_result.datetime_utc '2024-11-04 20:35:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3twx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":2}' # _entry.id 3TWX # _exptl.entry_id 3TWX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3TWX _cell.length_a 44.196 _cell.length_b 74.176 _cell.length_c 103.343 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TWX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,K,M,O 1 1 B,D,H,I,J,L,N,P 1 2 A,C,E,F,G,K,M,O 2 1 B,D,H,I,J,L,N,P 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_454 -x-1/2,-y,z-1/2 -1 0 0 0 -1 0 0 0 1 -22.098 0 -51.6715 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C ARG 15 C ARG 15 1_555 C N SET 16 C SET 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 D C ARG 15 D ARG 15 1_555 D N SET 16 D SET 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # _atom_sites.entry_id 3TWX _atom_sites.fract_transf_matrix[1][1] 0.022626 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013481 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009677 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 P6G A 1 1 1 P6G P6G . F 4 EDO A 1 656 1 EDO EDO . G 4 EDO A 1 2 2 EDO EDO . H 5 SO4 B 1 1 1 SO4 SO4 . I 5 SO4 B 1 2 2 SO4 SO4 . J 5 SO4 B 1 3 3 SO4 SO4 . K 5 SO4 C 1 17 4 SO4 SO4 . L 5 SO4 D 1 17 5 SO4 SO4 . M 6 HOH A 1 3 3 HOH HOH . M 6 HOH A 2 4 4 HOH HOH . M 6 HOH A 3 6 6 HOH HOH . M 6 HOH A 4 7 7 HOH HOH . M 6 HOH A 5 10 10 HOH HOH . M 6 HOH A 6 12 12 HOH HOH . M 6 HOH A 7 14 14 HOH HOH . M 6 HOH A 8 17 17 HOH HOH . M 6 HOH A 9 18 18 HOH HOH . M 6 HOH A 10 19 19 HOH HOH . M 6 HOH A 11 22 22 HOH HOH . M 6 HOH A 12 27 27 HOH HOH . M 6 HOH A 13 30 30 HOH HOH . M 6 HOH A 14 31 31 HOH HOH . M 6 HOH A 15 35 35 HOH HOH . M 6 HOH A 16 36 36 HOH HOH . M 6 HOH A 17 41 41 HOH HOH . M 6 HOH A 18 42 42 HOH HOH . M 6 HOH A 19 43 43 HOH HOH . M 6 HOH A 20 44 44 HOH HOH . M 6 HOH A 21 45 45 HOH HOH . M 6 HOH A 22 46 46 HOH HOH . M 6 HOH A 23 47 47 HOH HOH . M 6 HOH A 24 50 50 HOH HOH . M 6 HOH A 25 51 51 HOH HOH . M 6 HOH A 26 52 52 HOH HOH . M 6 HOH A 27 53 53 HOH HOH . M 6 HOH A 28 57 57 HOH HOH . M 6 HOH A 29 58 58 HOH HOH . M 6 HOH A 30 59 59 HOH HOH . M 6 HOH A 31 60 60 HOH HOH . M 6 HOH A 32 61 61 HOH HOH . M 6 HOH A 33 73 73 HOH HOH . M 6 HOH A 34 74 74 HOH HOH . M 6 HOH A 35 75 75 HOH HOH . M 6 HOH A 36 77 77 HOH HOH . M 6 HOH A 37 78 78 HOH HOH . M 6 HOH A 38 79 79 HOH HOH . M 6 HOH A 39 80 80 HOH HOH . M 6 HOH A 40 81 81 HOH HOH . M 6 HOH A 41 83 83 HOH HOH . M 6 HOH A 42 84 84 HOH HOH . M 6 HOH A 43 85 85 HOH HOH . M 6 HOH A 44 99 99 HOH HOH . M 6 HOH A 45 107 107 HOH HOH . M 6 HOH A 46 108 108 HOH HOH . M 6 HOH A 47 111 111 HOH HOH . M 6 HOH A 48 114 114 HOH HOH . M 6 HOH A 49 116 116 HOH HOH . M 6 HOH A 50 118 118 HOH HOH . M 6 HOH A 51 119 119 HOH HOH . M 6 HOH A 52 122 122 HOH HOH . M 6 HOH A 53 123 123 HOH HOH . M 6 HOH A 54 124 124 HOH HOH . M 6 HOH A 55 125 125 HOH HOH . M 6 HOH A 56 126 126 HOH HOH . M 6 HOH A 57 127 127 HOH HOH . M 6 HOH A 58 128 128 HOH HOH . M 6 HOH A 59 129 129 HOH HOH . M 6 HOH A 60 136 136 HOH HOH . M 6 HOH A 61 144 144 HOH HOH . M 6 HOH A 62 145 145 HOH HOH . M 6 HOH A 63 146 146 HOH HOH . M 6 HOH A 64 147 147 HOH HOH . M 6 HOH A 65 151 151 HOH HOH . M 6 HOH A 66 152 152 HOH HOH . M 6 HOH A 67 155 155 HOH HOH . M 6 HOH A 68 156 156 HOH HOH . M 6 HOH A 69 157 157 HOH HOH . M 6 HOH A 70 161 161 HOH HOH . M 6 HOH A 71 162 162 HOH HOH . M 6 HOH A 72 164 164 HOH HOH . M 6 HOH A 73 657 1 HOH HOH . M 6 HOH A 74 658 2 HOH HOH . N 6 HOH B 1 5 5 HOH HOH . N 6 HOH B 2 8 8 HOH HOH . N 6 HOH B 3 9 9 HOH HOH . N 6 HOH B 4 11 11 HOH HOH . N 6 HOH B 5 13 13 HOH HOH . N 6 HOH B 6 20 20 HOH HOH . N 6 HOH B 7 21 21 HOH HOH . N 6 HOH B 8 23 23 HOH HOH . N 6 HOH B 9 24 24 HOH HOH . N 6 HOH B 10 25 25 HOH HOH . N 6 HOH B 11 29 29 HOH HOH . N 6 HOH B 12 32 32 HOH HOH . N 6 HOH B 13 34 34 HOH HOH . N 6 HOH B 14 37 37 HOH HOH . N 6 HOH B 15 38 38 HOH HOH . N 6 HOH B 16 39 39 HOH HOH . N 6 HOH B 17 40 40 HOH HOH . N 6 HOH B 18 48 48 HOH HOH . N 6 HOH B 19 54 54 HOH HOH . N 6 HOH B 20 55 55 HOH HOH . N 6 HOH B 21 56 56 HOH HOH . N 6 HOH B 22 62 62 HOH HOH . N 6 HOH B 23 64 64 HOH HOH . N 6 HOH B 24 66 66 HOH HOH . N 6 HOH B 25 67 67 HOH HOH . N 6 HOH B 26 68 68 HOH HOH . N 6 HOH B 27 69 69 HOH HOH . N 6 HOH B 28 70 70 HOH HOH . N 6 HOH B 29 76 76 HOH HOH . N 6 HOH B 30 82 82 HOH HOH . N 6 HOH B 31 86 86 HOH HOH . N 6 HOH B 32 87 87 HOH HOH . N 6 HOH B 33 88 88 HOH HOH . N 6 HOH B 34 89 89 HOH HOH . N 6 HOH B 35 90 90 HOH HOH . N 6 HOH B 36 91 91 HOH HOH . N 6 HOH B 37 92 92 HOH HOH . N 6 HOH B 38 93 93 HOH HOH . N 6 HOH B 39 94 94 HOH HOH . N 6 HOH B 40 95 95 HOH HOH . N 6 HOH B 41 96 96 HOH HOH . N 6 HOH B 42 97 97 HOH HOH . N 6 HOH B 43 98 98 HOH HOH . N 6 HOH B 44 100 100 HOH HOH . N 6 HOH B 45 103 103 HOH HOH . N 6 HOH B 46 104 104 HOH HOH . N 6 HOH B 47 105 105 HOH HOH . N 6 HOH B 48 106 106 HOH HOH . N 6 HOH B 49 110 110 HOH HOH . N 6 HOH B 50 112 112 HOH HOH . N 6 HOH B 51 113 113 HOH HOH . N 6 HOH B 52 117 117 HOH HOH . N 6 HOH B 53 120 120 HOH HOH . N 6 HOH B 54 121 121 HOH HOH . N 6 HOH B 55 130 130 HOH HOH . N 6 HOH B 56 131 131 HOH HOH . N 6 HOH B 57 132 132 HOH HOH . N 6 HOH B 58 133 133 HOH HOH . N 6 HOH B 59 135 135 HOH HOH . N 6 HOH B 60 139 139 HOH HOH . N 6 HOH B 61 140 140 HOH HOH . N 6 HOH B 62 142 142 HOH HOH . N 6 HOH B 63 143 143 HOH HOH . N 6 HOH B 64 148 148 HOH HOH . N 6 HOH B 65 149 149 HOH HOH . N 6 HOH B 66 150 150 HOH HOH . N 6 HOH B 67 153 153 HOH HOH . N 6 HOH B 68 154 154 HOH HOH . N 6 HOH B 69 158 158 HOH HOH . N 6 HOH B 70 159 159 HOH HOH . N 6 HOH B 71 160 160 HOH HOH . N 6 HOH B 72 163 163 HOH HOH . N 6 HOH B 73 165 165 HOH HOH . O 6 HOH C 1 18 16 HOH HOH . O 6 HOH C 2 26 26 HOH HOH . O 6 HOH C 3 49 49 HOH HOH . O 6 HOH C 4 65 65 HOH HOH . O 6 HOH C 5 71 71 HOH HOH . O 6 HOH C 6 109 109 HOH HOH . O 6 HOH C 7 115 115 HOH HOH . O 6 HOH C 8 137 137 HOH HOH . O 6 HOH C 9 141 141 HOH HOH . P 6 HOH D 1 18 15 HOH HOH . P 6 HOH D 2 28 28 HOH HOH . P 6 HOH D 3 33 33 HOH HOH . P 6 HOH D 4 63 63 HOH HOH . P 6 HOH D 5 72 72 HOH HOH . P 6 HOH D 6 101 101 HOH HOH . P 6 HOH D 7 102 102 HOH HOH . P 6 HOH D 8 134 134 HOH HOH . P 6 HOH D 9 138 138 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 4 -20.726 4.62 -60.283 1 24.32 ? C1 EDO 2 A 1 HETATM 2 O O1 EDO . . . G 4 -19.368 4.718 -59.895 1 47.05 ? O1 EDO 2 A 1 HETATM 3 C C2 EDO . . . G 4 -20.885 3.76 -61.535 1 32.28 ? C2 EDO 2 A 1 HETATM 4 O O2 EDO . . . G 4 -20.422 2.432 -61.372 1 20.93 ? O2 EDO 2 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #