data_3TXA
#
_model_server_result.job_id            abxeS2Dxip6NBN6blqrgRw 
_model_server_result.datetime_utc      '2025-04-01 09:03:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3txa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":809}' 
#
_entry.id    3TXA 
#
_exptl.entry_id    3TXA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              6.941 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LITHIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3TXA 
_cell.length_a            124.585 
_cell.length_b            124.585 
_cell.length_c            117.839 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TXA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 141 A LYS 188 1_555 A CG ASN 645 A ASN 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? 
metalc ? metalc1 A OG SER 184 A SER 231 1_555 B MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? 
metalc ? metalc2 A OG SER 186 A SER 233 1_555 B MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
metalc ? metalc3 A OE1 GLU 190 A GLU 237 1_555 H CD CD . A CD 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? 
metalc ? metalc4 A OD1 ASP 256 A ASP 303 1_555 E CD CD . A CD 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? 
metalc ? metalc5 A OD2 ASP 256 A ASP 303 1_555 E CD CD . A CD 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? 
metalc ? metalc6 A ND1 HIS 258 A HIS 305 1_555 E CD CD . A CD 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? 
metalc ? metalc7 A NE2 HIS 267 A HIS 314 1_555 F CD CD . A CD 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
metalc ? metalc8 A OE2 GLU 293 A GLU 340 1_555 F CD CD . A CD 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
metalc ? metalc9 A OE1 GLU 293 A GLU 340 1_555 F CD CD . A CD 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
metalc ? metalc10 A OD1 ASP 337 A ASP 384 1_555 B MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? 
metalc ? metalc11 A NE2 HIS 541 A HIS 588 1_555 C CD CD . A CD 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc12 A OD1 ASP 545 A ASP 592 1_555 I CD CD . A CD 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc13 A OD2 ASP 545 A ASP 592 1_555 I CD CD . A CD 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? 
metalc ? metalc14 A ND1 HIS 615 A HIS 662 1_555 I CD CD . A CD 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc15 B MG MG . A MG 801 1_555 K O HOH . A HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? 
metalc ? metalc16 B MG MG . A MG 801 1_555 K O HOH . A HOH 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc17 B MG MG . A MG 801 1_555 K O HOH . A HOH 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? 
metalc ? metalc18 C CD CD . A CD 802 1_555 K O HOH . A HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? 
metalc ? metalc19 C CD CD . A CD 802 1_555 K O HOH . A HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc20 E CD CD . A CD 804 1_555 K O HOH . A HOH 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc21 E CD CD . A CD 804 1_555 K O HOH . A HOH 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? 
metalc ? metalc22 F CD CD . A CD 805 1_555 K O HOH . A HOH 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc23 F CD CD . A CD 805 1_555 K O HOH . A HOH 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc24 H CD CD . A CD 807 1_555 K O HOH . A HOH 963 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? 
metalc ? metalc25 I CD CD . A CD 808 1_555 K O HOH . A HOH 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc26 I CD CD . A CD 808 1_555 K O HOH . A HOH 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
#
_chem_comp.formula           'Li 1' 
_chem_comp.formula_weight    6.941 
_chem_comp.id                LI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LITHIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3TXA 
_atom_sites.fract_transf_matrix[1][1]    0.008027 
_atom_sites.fract_transf_matrix[1][2]    0.004634 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009268 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008486 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 801 801 MG MG . 
C 3 CD A 1 802 802 CD CD . 
D 3 CD A 1 803 803 CD CD . 
E 3 CD A 1 804 804 CD CD . 
F 3 CD A 1 805 805 CD CD . 
G 3 CD A 1 806 806 CD CD . 
H 3 CD A 1 807 807 CD CD . 
I 3 CD A 1 808 808 CD CD . 
J 4 LI A 1 809 809 LI LI . 
K 5 HOH A 1 7 7 HOH HOH . 
K 5 HOH A 2 8 8 HOH HOH . 
K 5 HOH A 3 9 9 HOH HOH . 
K 5 HOH A 4 10 10 HOH HOH . 
K 5 HOH A 5 11 11 HOH HOH . 
K 5 HOH A 6 12 12 HOH HOH . 
K 5 HOH A 7 13 13 HOH HOH . 
K 5 HOH A 8 14 14 HOH HOH . 
K 5 HOH A 9 15 15 HOH HOH . 
K 5 HOH A 10 16 16 HOH HOH . 
K 5 HOH A 11 19 19 HOH HOH . 
K 5 HOH A 12 20 20 HOH HOH . 
K 5 HOH A 13 21 21 HOH HOH . 
K 5 HOH A 14 22 22 HOH HOH . 
K 5 HOH A 15 23 23 HOH HOH . 
K 5 HOH A 16 901 901 HOH HOH . 
K 5 HOH A 17 902 902 HOH HOH . 
K 5 HOH A 18 903 903 HOH HOH . 
K 5 HOH A 19 904 904 HOH HOH . 
K 5 HOH A 20 905 905 HOH HOH . 
K 5 HOH A 21 906 906 HOH HOH . 
K 5 HOH A 22 907 907 HOH HOH . 
K 5 HOH A 23 908 908 HOH HOH . 
K 5 HOH A 24 909 909 HOH HOH . 
K 5 HOH A 25 910 910 HOH HOH . 
K 5 HOH A 26 911 911 HOH HOH . 
K 5 HOH A 27 912 24 HOH HOH . 
K 5 HOH A 28 913 26 HOH HOH . 
K 5 HOH A 29 914 27 HOH HOH . 
K 5 HOH A 30 915 28 HOH HOH . 
K 5 HOH A 31 916 29 HOH HOH . 
K 5 HOH A 32 917 31 HOH HOH . 
K 5 HOH A 33 918 32 HOH HOH . 
K 5 HOH A 34 919 34 HOH HOH . 
K 5 HOH A 35 920 35 HOH HOH . 
K 5 HOH A 36 921 40 HOH HOH . 
K 5 HOH A 37 922 41 HOH HOH . 
K 5 HOH A 38 923 45 HOH HOH . 
K 5 HOH A 39 924 46 HOH HOH . 
K 5 HOH A 40 925 50 HOH HOH . 
K 5 HOH A 41 926 51 HOH HOH . 
K 5 HOH A 42 927 52 HOH HOH . 
K 5 HOH A 43 928 53 HOH HOH . 
K 5 HOH A 44 929 54 HOH HOH . 
K 5 HOH A 45 930 55 HOH HOH . 
K 5 HOH A 46 931 56 HOH HOH . 
K 5 HOH A 47 932 57 HOH HOH . 
K 5 HOH A 48 933 58 HOH HOH . 
K 5 HOH A 49 934 60 HOH HOH . 
K 5 HOH A 50 935 61 HOH HOH . 
K 5 HOH A 51 936 62 HOH HOH . 
K 5 HOH A 52 937 63 HOH HOH . 
K 5 HOH A 53 938 64 HOH HOH . 
K 5 HOH A 54 939 66 HOH HOH . 
K 5 HOH A 55 940 69 HOH HOH . 
K 5 HOH A 56 941 70 HOH HOH . 
K 5 HOH A 57 942 71 HOH HOH . 
K 5 HOH A 58 943 72 HOH HOH . 
K 5 HOH A 59 944 73 HOH HOH . 
K 5 HOH A 60 945 82 HOH HOH . 
K 5 HOH A 61 946 83 HOH HOH . 
K 5 HOH A 62 947 84 HOH HOH . 
K 5 HOH A 63 948 87 HOH HOH . 
K 5 HOH A 64 949 89 HOH HOH . 
K 5 HOH A 65 950 91 HOH HOH . 
K 5 HOH A 66 951 93 HOH HOH . 
K 5 HOH A 67 952 97 HOH HOH . 
K 5 HOH A 68 953 99 HOH HOH . 
K 5 HOH A 69 954 109 HOH HOH . 
K 5 HOH A 70 955 115 HOH HOH . 
K 5 HOH A 71 956 117 HOH HOH . 
K 5 HOH A 72 957 124 HOH HOH . 
K 5 HOH A 73 958 125 HOH HOH . 
K 5 HOH A 74 959 129 HOH HOH . 
K 5 HOH A 75 960 130 HOH HOH . 
K 5 HOH A 76 961 133 HOH HOH . 
K 5 HOH A 77 962 136 HOH HOH . 
K 5 HOH A 78 963 138 HOH HOH . 
K 5 HOH A 79 964 139 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           LI 
_atom_site.label_atom_id         LI 
_atom_site.label_comp_id         LI 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               79.019 
_atom_site.Cartn_y               34.489 
_atom_site.Cartn_z               10.27 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        7.12 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          LI 
_atom_site.auth_comp_id          LI 
_atom_site.auth_seq_id           809 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#