data_3TXI # _model_server_result.job_id 2C3U5E94wl4sDmIYAU_eSg _model_server_result.datetime_utc '2024-11-16 18:59:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3txi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":131}' # _entry.id 3TXI # _exptl.entry_id 3TXI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 371.248 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description carboplatin _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3TXI _cell.length_a 78.023 _cell.length_b 78.023 _cell.length_c 36.97 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TXI _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc1 A NH1 ARG 14 A ARG 14 1_555 K PT1 QPT . A QPT 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc2 A NE2 HIS 15 A HIS 15 1_555 K PT1 QPT . A QPT 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc3 A ND1 HIS 15 A HIS 15 1_555 L PT1 QPT . A QPT 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc4 A O SER 60 A SER 60 1_555 J NA NA . A NA 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc5 A O CYS 64 A CYS 64 1_555 J NA NA . A NA 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc6 A OG SER 72 A SER 72 1_555 J NA NA . A NA 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc7 A O ARG 73 A ARG 73 1_555 J NA NA . A NA 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc8 L PT1 QPT . A QPT 131 1_555 AA O HOH . A HOH 2105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc9 J NA NA . A NA 1138 1_555 AA O HOH . A HOH 2077 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc10 J NA NA . A NA 1138 1_555 AA O HOH . A HOH 2082 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? # _chem_comp.formula 'C6 H12 N2 O4 Pt 2' _chem_comp.formula_weight 371.248 _chem_comp.id QPT _chem_comp.mon_nstd_flag . _chem_comp.name carboplatin _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 PT1 QPT sing 286 n n PT1 N1 QPT sing 287 n n N2 H1 QPT sing 288 n n N2 H2 QPT sing 289 n n N1 H3 QPT sing 290 n n N1 H4 QPT sing 291 n n PT1 O2 QPT sing 292 n n PT1 O1 QPT sing 293 n n O1 C1 QPT sing 294 n n O2 C2 QPT sing 295 n n C1 C3 QPT sing 296 n n C1 O4 QPT doub 297 n n C2 O3 QPT doub 298 n n C2 C3 QPT sing 299 n n C3 C7 QPT sing 300 n n C3 C5 QPT sing 301 n n C5 C6 QPT sing 302 n n C6 C7 QPT sing 303 n n C5 H5 QPT sing 304 n n C5 H6 QPT sing 305 n n C6 H7 QPT sing 306 n n C6 H8 QPT sing 307 n n C7 H9 QPT sing 308 n n C7 H10 QPT sing 309 n n N2 H11 QPT sing 310 n n N1 H12 QPT sing 311 n n # _atom_sites.entry_id 3TXI _atom_sites.fract_transf_matrix[1][1] 0.012817 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012817 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027049 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 1130 1130 CL CL . C 2 CL A 1 1131 1131 CL CL . D 2 CL A 1 1132 1132 CL CL . E 2 CL A 1 1133 1133 CL CL . F 2 CL A 1 1134 1134 CL CL . G 2 CL A 1 1135 1135 CL CL . H 2 CL A 1 1136 1136 CL CL . I 2 CL A 1 1137 1137 CL CL . J 3 NA A 1 1138 1138 NA NA . K 4 QPT A 1 130 1 QPT QPT . L 4 QPT A 1 131 1 QPT QPT . M 5 DMS A 1 132 1 DMS DMS . N 5 DMS A 1 133 1 DMS DMS . O 5 DMS A 1 134 1 DMS DMS . P 5 DMS A 1 135 1 DMS DMS . Q 5 DMS A 1 136 1 DMS DMS . R 5 DMS A 1 137 1 DMS DMS . S 5 DMS A 1 138 1 DMS DMS . T 5 DMS A 1 139 1 DMS DMS . U 5 DMS A 1 140 1 DMS DMS . V 5 DMS A 1 141 1 DMS DMS . W 5 DMS A 1 142 1 DMS DMS . X 5 DMS A 1 143 1 DMS DMS . Y 5 DMS A 1 144 1 DMS DMS . Z 5 DMS A 1 145 1 DMS DMS . AA 6 HOH A 1 2001 2001 HOH HOH . AA 6 HOH A 2 2002 2002 HOH HOH . AA 6 HOH A 3 2003 2003 HOH HOH . AA 6 HOH A 4 2004 2004 HOH HOH . AA 6 HOH A 5 2005 1 HOH HOH . AA 6 HOH A 6 2008 2008 HOH HOH . AA 6 HOH A 7 2009 2009 HOH HOH . AA 6 HOH A 8 2010 2010 HOH HOH . AA 6 HOH A 9 2011 2011 HOH HOH . AA 6 HOH A 10 2012 2012 HOH HOH . AA 6 HOH A 11 2013 2013 HOH HOH . AA 6 HOH A 12 2014 2014 HOH HOH . AA 6 HOH A 13 2015 2015 HOH HOH . AA 6 HOH A 14 2016 2016 HOH HOH . AA 6 HOH A 15 2018 2018 HOH HOH . AA 6 HOH A 16 2020 2020 HOH HOH . AA 6 HOH A 17 2021 2021 HOH HOH . AA 6 HOH A 18 2022 2022 HOH HOH . AA 6 HOH A 19 2024 2024 HOH HOH . AA 6 HOH A 20 2025 2025 HOH HOH . AA 6 HOH A 21 2026 2026 HOH HOH . AA 6 HOH A 22 2027 2027 HOH HOH . AA 6 HOH A 23 2028 2028 HOH HOH . AA 6 HOH A 24 2030 2030 HOH HOH . AA 6 HOH A 25 2031 2031 HOH HOH . AA 6 HOH A 26 2032 2032 HOH HOH . AA 6 HOH A 27 2033 2033 HOH HOH . AA 6 HOH A 28 2034 2034 HOH HOH . AA 6 HOH A 29 2035 2035 HOH HOH . AA 6 HOH A 30 2036 2036 HOH HOH . AA 6 HOH A 31 2037 2037 HOH HOH . AA 6 HOH A 32 2038 2038 HOH HOH . AA 6 HOH A 33 2039 2039 HOH HOH . AA 6 HOH A 34 2041 2041 HOH HOH . AA 6 HOH A 35 2043 2043 HOH HOH . AA 6 HOH A 36 2044 2044 HOH HOH . AA 6 HOH A 37 2045 2045 HOH HOH . AA 6 HOH A 38 2046 2046 HOH HOH . AA 6 HOH A 39 2047 2047 HOH HOH . AA 6 HOH A 40 2048 2048 HOH HOH . AA 6 HOH A 41 2049 2049 HOH HOH . AA 6 HOH A 42 2050 2050 HOH HOH . AA 6 HOH A 43 2051 2051 HOH HOH . AA 6 HOH A 44 2054 2054 HOH HOH . AA 6 HOH A 45 2055 2055 HOH HOH . AA 6 HOH A 46 2057 2057 HOH HOH . AA 6 HOH A 47 2058 2058 HOH HOH . AA 6 HOH A 48 2060 2060 HOH HOH . AA 6 HOH A 49 2061 2061 HOH HOH . AA 6 HOH A 50 2062 2062 HOH HOH . AA 6 HOH A 51 2063 2063 HOH HOH . AA 6 HOH A 52 2064 2064 HOH HOH . AA 6 HOH A 53 2065 2065 HOH HOH . AA 6 HOH A 54 2066 2066 HOH HOH . AA 6 HOH A 55 2067 2067 HOH HOH . AA 6 HOH A 56 2068 2068 HOH HOH . AA 6 HOH A 57 2069 2069 HOH HOH . AA 6 HOH A 58 2071 2071 HOH HOH . AA 6 HOH A 59 2074 2074 HOH HOH . AA 6 HOH A 60 2075 2075 HOH HOH . AA 6 HOH A 61 2076 2076 HOH HOH . AA 6 HOH A 62 2077 2077 HOH HOH . AA 6 HOH A 63 2079 2079 HOH HOH . AA 6 HOH A 64 2081 2081 HOH HOH . AA 6 HOH A 65 2082 2082 HOH HOH . AA 6 HOH A 66 2083 2083 HOH HOH . AA 6 HOH A 67 2085 2085 HOH HOH . AA 6 HOH A 68 2086 2086 HOH HOH . AA 6 HOH A 69 2087 2087 HOH HOH . AA 6 HOH A 70 2088 2088 HOH HOH . AA 6 HOH A 71 2090 2090 HOH HOH . AA 6 HOH A 72 2091 2091 HOH HOH . AA 6 HOH A 73 2092 2092 HOH HOH . AA 6 HOH A 74 2093 2093 HOH HOH . AA 6 HOH A 75 2094 2094 HOH HOH . AA 6 HOH A 76 2095 2095 HOH HOH . AA 6 HOH A 77 2096 2096 HOH HOH . AA 6 HOH A 78 2097 2097 HOH HOH . AA 6 HOH A 79 2098 2098 HOH HOH . AA 6 HOH A 80 2099 2099 HOH HOH . AA 6 HOH A 81 2101 2101 HOH HOH . AA 6 HOH A 82 2102 2102 HOH HOH . AA 6 HOH A 83 2103 2103 HOH HOH . AA 6 HOH A 84 2105 2105 HOH HOH . AA 6 HOH A 85 2108 2108 HOH HOH . AA 6 HOH A 86 2109 2109 HOH HOH . AA 6 HOH A 87 2110 2110 HOH HOH . AA 6 HOH A 88 2111 2111 HOH HOH . AA 6 HOH A 89 2112 2112 HOH HOH . AA 6 HOH A 90 2113 2113 HOH HOH . AA 6 HOH A 91 2114 2114 HOH HOH . AA 6 HOH A 92 2115 2115 HOH HOH . AA 6 HOH A 93 2116 2116 HOH HOH . AA 6 HOH A 94 2117 2117 HOH HOH . AA 6 HOH A 95 2118 2118 HOH HOH . AA 6 HOH A 96 2119 2119 HOH HOH . AA 6 HOH A 97 2120 2120 HOH HOH . AA 6 HOH A 98 2121 2121 HOH HOH . AA 6 HOH A 99 2122 2122 HOH HOH . AA 6 HOH A 100 2123 2123 HOH HOH . AA 6 HOH A 101 2125 2125 HOH HOH . AA 6 HOH A 102 2126 2126 HOH HOH . AA 6 HOH A 103 2127 2127 HOH HOH . AA 6 HOH A 104 2128 2128 HOH HOH . AA 6 HOH A 105 2129 2129 HOH HOH . AA 6 HOH A 106 2130 2130 HOH HOH . AA 6 HOH A 107 2131 2131 HOH HOH . AA 6 HOH A 108 2133 2133 HOH HOH . AA 6 HOH A 109 2134 2134 HOH HOH . AA 6 HOH A 110 2135 2135 HOH HOH . AA 6 HOH A 111 2138 2138 HOH HOH . AA 6 HOH A 112 2139 2139 HOH HOH . AA 6 HOH A 113 2140 2140 HOH HOH . AA 6 HOH A 114 2141 2141 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N2 QPT . . . L 4 -10.671 -13.234 -9.095 1 40.62 ? N2 QPT 131 A 1 HETATM 2 PT PT1 QPT . . . L 4 -11.476 -11.688 -7.973 1 46.27 ? PT1 QPT 131 A 1 HETATM 3 N N1 QPT . . . L 4 -11.408 -12.753 -6.205 1 43.04 ? N1 QPT 131 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 3 #