data_3TXJ
#
_model_server_result.job_id            rav51fej0zXMK-vW08z2Ag 
_model_server_result.datetime_utc      '2024-10-12 14:32:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3txj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":130}' 
#
_entry.id    3TXJ 
#
_exptl.entry_id    3TXJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3TXJ 
_cell.length_a            78.527 
_cell.length_b            78.527 
_cell.length_c            36.722 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TXJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             K 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc1 A O SER 60 A SER 60 1_555 J NA NA . A NA 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? 
metalc ? metalc2 A O CYS 64 A CYS 64 1_555 J NA NA . A NA 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc3 A OG SER 72 A SER 72 1_555 J NA NA . A NA 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.84 ? 
metalc ? metalc4 A O ARG 73 A ARG 73 1_555 J NA NA . A NA 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     3TXJ 
_atom_sites.fract_transf_matrix[1][1]    0.012734 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012734 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.027232 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 1130 1130 CL CL . 
C 2 CL A 1 1131 1131 CL CL . 
D 2 CL A 1 1132 1132 CL CL . 
E 2 CL A 1 1133 1133 CL CL . 
F 2 CL A 1 1134 1134 CL CL . 
G 2 CL A 1 1135 1135 CL CL . 
H 2 CL A 1 1136 1136 CL CL . 
I 2 CL A 1 1137 1137 CL CL . 
J 3 NA A 1 1138 1138 NA NA . 
K 4 NAG A 1 130 1 NAG NAG . 
L 5 HOH A 1 2001 2001 HOH HOH . 
L 5 HOH A 2 2003 2003 HOH HOH . 
L 5 HOH A 3 2012 2012 HOH HOH . 
L 5 HOH A 4 2020 2020 HOH HOH . 
L 5 HOH A 5 2028 2028 HOH HOH . 
L 5 HOH A 6 2036 2036 HOH HOH . 
L 5 HOH A 7 2039 2039 HOH HOH . 
L 5 HOH A 8 2044 2044 HOH HOH . 
L 5 HOH A 9 2057 2057 HOH HOH . 
L 5 HOH A 10 2062 2062 HOH HOH . 
L 5 HOH A 11 2064 2064 HOH HOH . 
L 5 HOH A 12 2067 2067 HOH HOH . 
L 5 HOH A 13 2074 2074 HOH HOH . 
L 5 HOH A 14 2081 2081 HOH HOH . 
L 5 HOH A 15 2085 2085 HOH HOH . 
L 5 HOH A 16 2086 2086 HOH HOH . 
L 5 HOH A 17 2092 2092 HOH HOH . 
L 5 HOH A 18 2094 2094 HOH HOH . 
L 5 HOH A 19 2097 2097 HOH HOH . 
L 5 HOH A 20 2098 2098 HOH HOH . 
L 5 HOH A 21 2099 2099 HOH HOH . 
L 5 HOH A 22 2103 2103 HOH HOH . 
L 5 HOH A 23 2109 2109 HOH HOH . 
L 5 HOH A 24 2110 2110 HOH HOH . 
L 5 HOH A 25 2116 2116 HOH HOH . 
L 5 HOH A 26 2119 2119 HOH HOH . 
L 5 HOH A 27 2124 2124 HOH HOH . 
L 5 HOH A 28 2127 2127 HOH HOH . 
L 5 HOH A 29 2128 2128 HOH HOH . 
L 5 HOH A 30 2129 2129 HOH HOH . 
L 5 HOH A 31 2131 2131 HOH HOH . 
L 5 HOH A 32 2139 2139 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . K 4 -24.331 5.558 -6.326 1 40.55 ? C1 NAG 130 A 1 
HETATM 2 C C2 NAG . . . K 4 -23.955 5.592 -4.851 1 41.33 ? C2 NAG 130 A 1 
HETATM 3 C C3 NAG . . . K 4 -25.011 6.392 -4.112 1 41 ? C3 NAG 130 A 1 
HETATM 4 C C4 NAG . . . K 4 -25.249 7.773 -4.759 1 41.24 ? C4 NAG 130 A 1 
HETATM 5 C C5 NAG . . . K 4 -25.224 7.825 -6.305 1 41.22 ? C5 NAG 130 A 1 
HETATM 6 C C6 NAG . . . K 4 -24.792 9.197 -6.86 1 42.08 ? C6 NAG 130 A 1 
HETATM 7 C C7 NAG . . . K 4 -22.652 3.704 -3.858 1 39.21 ? C7 NAG 130 A 1 
HETATM 8 C C8 NAG . . . K 4 -22.683 2.26 -3.488 1 37.36 ? C8 NAG 130 A 1 
HETATM 9 N N2 NAG . . . K 4 -23.779 4.211 -4.381 1 41.38 ? N2 NAG 130 A 1 
HETATM 10 O O1 NAG . . . K 4 -23.281 4.871 -6.943 1 41.13 ? O1 NAG 130 A 1 
HETATM 11 O O3 NAG . . . K 4 -24.543 6.531 -2.794 1 41.61 ? O3 NAG 130 A 1 
HETATM 12 O O4 NAG . . . K 4 -26.517 8.244 -4.355 1 41.4 ? O4 NAG 130 A 1 
HETATM 13 O O5 NAG . . . K 4 -24.382 6.853 -6.897 1 40.68 ? O5 NAG 130 A 1 
HETATM 14 O O6 NAG . . . K 4 -23.521 9.655 -6.355 1 41.15 ? O6 NAG 130 A 1 
HETATM 15 O O7 NAG . . . K 4 -21.625 4.341 -3.661 1 38.91 ? O7 NAG 130 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           15 
#