data_3TXT # _model_server_result.job_id RuaMOpasd2yfWzKicqqZqw _model_server_result.datetime_utc '2024-12-11 07:42:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3txt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3TXT # _exptl.entry_id 3TXT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 166.155 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIISOPROPYL PHOSPHONATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3TXT _cell.length_a 109.667 _cell.length_b 109.667 _cell.length_c 125.097 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TXT _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 54.8335 94.974408 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -54.8335 94.974408 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id P _struct_conn.ptnr1_label_comp_id DFP _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id DFP _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id OG _struct_conn.ptnr2_label_comp_id SER _struct_conn.ptnr2_label_seq_id 110 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id SER _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.629 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H15 O3 P' _chem_comp.formula_weight 166.155 _chem_comp.id DFP _chem_comp.mon_nstd_flag . _chem_comp.name 'DIISOPROPYL PHOSPHONATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DFP sing 83 n n C1 C3 DFP sing 84 n n C1 O1P DFP sing 85 n n C1 H1 DFP sing 86 n n C2 H21 DFP sing 87 n n C2 H22 DFP sing 88 n n C2 H23 DFP sing 89 n n C3 H31 DFP sing 90 n n C3 H32 DFP sing 91 n n C3 H33 DFP sing 92 n n C1' C2' DFP sing 93 n n C1' C3' DFP sing 94 n n C1' O2P DFP sing 95 n n C1' H1' DFP sing 96 n n C2' "H2'1" DFP sing 97 n n C2' "H2'2" DFP sing 98 n n C2' "H2'3" DFP sing 99 n n C3' "H3'1" DFP sing 100 n n C3' "H3'2" DFP sing 101 n n C3' "H3'3" DFP sing 102 n n P O1P DFP sing 103 n n P O2P DFP sing 104 n n P O3P DFP doub 105 n n HP1 P DFP sing 106 n n # _atom_sites.entry_id 3TXT _atom_sites.fract_transf_matrix[1][1] 0.009119 _atom_sites.fract_transf_matrix[1][2] 0.005265 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010529 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007994 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DFP A 1 1 1 DFP DFP . C 3 HOH A 1 2 2 HOH HOH . C 3 HOH A 2 3 3 HOH HOH . C 3 HOH A 3 4 4 HOH HOH . C 3 HOH A 4 5 5 HOH HOH . C 3 HOH A 5 6 6 HOH HOH . C 3 HOH A 6 7 7 HOH HOH . C 3 HOH A 7 8 8 HOH HOH . C 3 HOH A 8 9 9 HOH HOH . C 3 HOH A 9 10 10 HOH HOH . C 3 HOH A 10 11 11 HOH HOH . C 3 HOH A 11 12 12 HOH HOH . C 3 HOH A 12 13 13 HOH HOH . C 3 HOH A 13 14 14 HOH HOH . C 3 HOH A 14 15 15 HOH HOH . C 3 HOH A 15 16 16 HOH HOH . C 3 HOH A 16 17 17 HOH HOH . C 3 HOH A 17 18 18 HOH HOH . C 3 HOH A 18 19 19 HOH HOH . C 3 HOH A 19 20 20 HOH HOH . C 3 HOH A 20 21 21 HOH HOH . C 3 HOH A 21 22 22 HOH HOH . C 3 HOH A 22 23 23 HOH HOH . C 3 HOH A 23 271 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DFP . . . B 2 0.655 44.83 32.867 1 61.67 ? C1 DFP 1 A 1 HETATM 2 C C2 DFP . . . B 2 1.384 44.17 33.994 1 54.71 ? C2 DFP 1 A 1 HETATM 3 C C3 DFP . . . B 2 1.31 44.434 31.583 1 54.84 ? C3 DFP 1 A 1 HETATM 4 C C1' DFP . . . B 2 -1.363 48.449 33.197 1 61.88 ? C1' DFP 1 A 1 HETATM 5 C C2' DFP . . . B 2 -1.194 48.771 31.752 1 60.99 ? C2' DFP 1 A 1 HETATM 6 C C3' DFP . . . B 2 -2.236 49.49 33.821 1 59.61 ? C3' DFP 1 A 1 HETATM 7 P P DFP . . . B 2 0.545 47.066 34.247 1 54.46 ? P DFP 1 A 1 HETATM 8 O O1P DFP . . . B 2 0.607 46.216 32.94 1 55.18 ? O1P DFP 1 A 1 HETATM 9 O O2P DFP . . . B 2 -0.121 48.42 33.826 1 59.49 ? O2P DFP 1 A 1 HETATM 10 O O3P DFP . . . B 2 1.929 47.381 34.768 1 53.3 ? O3P DFP 1 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #