data_3TXY # _model_server_result.job_id vYSjhZrNgnIrXtfLJSuQSQ _model_server_result.datetime_utc '2024-11-22 18:52:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3txy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":196}' # _entry.id 3TXY # _exptl.entry_id 3TXY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3TXY _cell.length_a 61.79 _cell.length_b 61.79 _cell.length_c 181.77 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TXY _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 61.79 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 3TXY _atom_sites.fract_transf_matrix[1][1] 0.016184 _atom_sites.fract_transf_matrix[1][2] 0.009344 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018687 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005501 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 196 1 EDO EDO . C 3 HOH A 1 197 197 HOH HOH . C 3 HOH A 2 198 198 HOH HOH . C 3 HOH A 3 199 199 HOH HOH . C 3 HOH A 4 200 200 HOH HOH . C 3 HOH A 5 201 201 HOH HOH . C 3 HOH A 6 202 202 HOH HOH . C 3 HOH A 7 203 203 HOH HOH . C 3 HOH A 8 204 204 HOH HOH . C 3 HOH A 9 205 205 HOH HOH . C 3 HOH A 10 206 206 HOH HOH . C 3 HOH A 11 207 207 HOH HOH . C 3 HOH A 12 208 1 HOH HOH . C 3 HOH A 13 209 209 HOH HOH . C 3 HOH A 14 210 2 HOH HOH . C 3 HOH A 15 211 3 HOH HOH . C 3 HOH A 16 212 4 HOH HOH . C 3 HOH A 17 213 5 HOH HOH . C 3 HOH A 18 214 6 HOH HOH . C 3 HOH A 19 215 7 HOH HOH . C 3 HOH A 20 216 8 HOH HOH . C 3 HOH A 21 217 9 HOH HOH . C 3 HOH A 22 218 10 HOH HOH . C 3 HOH A 23 219 11 HOH HOH . C 3 HOH A 24 220 12 HOH HOH . C 3 HOH A 25 221 13 HOH HOH . C 3 HOH A 26 222 14 HOH HOH . C 3 HOH A 27 223 15 HOH HOH . C 3 HOH A 28 224 16 HOH HOH . C 3 HOH A 29 225 17 HOH HOH . C 3 HOH A 30 226 18 HOH HOH . C 3 HOH A 31 227 19 HOH HOH . C 3 HOH A 32 228 20 HOH HOH . C 3 HOH A 33 229 21 HOH HOH . C 3 HOH A 34 230 22 HOH HOH . C 3 HOH A 35 231 23 HOH HOH . C 3 HOH A 36 232 24 HOH HOH . C 3 HOH A 37 233 25 HOH HOH . C 3 HOH A 38 234 26 HOH HOH . C 3 HOH A 39 235 27 HOH HOH . C 3 HOH A 40 236 28 HOH HOH . C 3 HOH A 41 237 29 HOH HOH . C 3 HOH A 42 238 30 HOH HOH . C 3 HOH A 43 239 31 HOH HOH . C 3 HOH A 44 240 32 HOH HOH . C 3 HOH A 45 241 33 HOH HOH . C 3 HOH A 46 242 34 HOH HOH . C 3 HOH A 47 243 35 HOH HOH . C 3 HOH A 48 244 36 HOH HOH . C 3 HOH A 49 245 37 HOH HOH . C 3 HOH A 50 246 38 HOH HOH . C 3 HOH A 51 247 40 HOH HOH . C 3 HOH A 52 248 41 HOH HOH . C 3 HOH A 53 249 42 HOH HOH . C 3 HOH A 54 250 43 HOH HOH . C 3 HOH A 55 251 44 HOH HOH . C 3 HOH A 56 252 45 HOH HOH . C 3 HOH A 57 253 46 HOH HOH . C 3 HOH A 58 254 47 HOH HOH . C 3 HOH A 59 255 48 HOH HOH . C 3 HOH A 60 256 49 HOH HOH . C 3 HOH A 61 257 50 HOH HOH . C 3 HOH A 62 258 52 HOH HOH . C 3 HOH A 63 259 53 HOH HOH . C 3 HOH A 64 260 54 HOH HOH . C 3 HOH A 65 261 55 HOH HOH . C 3 HOH A 66 262 56 HOH HOH . C 3 HOH A 67 263 57 HOH HOH . C 3 HOH A 68 264 59 HOH HOH . C 3 HOH A 69 265 60 HOH HOH . C 3 HOH A 70 266 62 HOH HOH . C 3 HOH A 71 267 63 HOH HOH . C 3 HOH A 72 268 64 HOH HOH . C 3 HOH A 73 269 65 HOH HOH . C 3 HOH A 74 270 66 HOH HOH . C 3 HOH A 75 271 68 HOH HOH . C 3 HOH A 76 272 69 HOH HOH . C 3 HOH A 77 273 70 HOH HOH . C 3 HOH A 78 274 71 HOH HOH . C 3 HOH A 79 275 72 HOH HOH . C 3 HOH A 80 276 73 HOH HOH . C 3 HOH A 81 277 74 HOH HOH . C 3 HOH A 82 278 76 HOH HOH . C 3 HOH A 83 279 77 HOH HOH . C 3 HOH A 84 280 78 HOH HOH . C 3 HOH A 85 281 79 HOH HOH . C 3 HOH A 86 282 80 HOH HOH . C 3 HOH A 87 283 81 HOH HOH . C 3 HOH A 88 284 82 HOH HOH . C 3 HOH A 89 285 83 HOH HOH . C 3 HOH A 90 286 85 HOH HOH . C 3 HOH A 91 287 86 HOH HOH . C 3 HOH A 92 288 87 HOH HOH . C 3 HOH A 93 289 89 HOH HOH . C 3 HOH A 94 290 90 HOH HOH . C 3 HOH A 95 291 91 HOH HOH . C 3 HOH A 96 292 92 HOH HOH . C 3 HOH A 97 293 93 HOH HOH . C 3 HOH A 98 294 97 HOH HOH . C 3 HOH A 99 295 98 HOH HOH . C 3 HOH A 100 296 99 HOH HOH . C 3 HOH A 101 297 100 HOH HOH . C 3 HOH A 102 298 101 HOH HOH . C 3 HOH A 103 299 103 HOH HOH . C 3 HOH A 104 300 104 HOH HOH . C 3 HOH A 105 301 106 HOH HOH . C 3 HOH A 106 302 107 HOH HOH . C 3 HOH A 107 303 108 HOH HOH . C 3 HOH A 108 304 109 HOH HOH . C 3 HOH A 109 305 110 HOH HOH . C 3 HOH A 110 306 111 HOH HOH . C 3 HOH A 111 307 112 HOH HOH . C 3 HOH A 112 308 114 HOH HOH . C 3 HOH A 113 309 115 HOH HOH . C 3 HOH A 114 310 116 HOH HOH . C 3 HOH A 115 311 117 HOH HOH . C 3 HOH A 116 312 118 HOH HOH . C 3 HOH A 117 313 119 HOH HOH . C 3 HOH A 118 314 123 HOH HOH . C 3 HOH A 119 315 124 HOH HOH . C 3 HOH A 120 316 125 HOH HOH . C 3 HOH A 121 317 126 HOH HOH . C 3 HOH A 122 318 127 HOH HOH . C 3 HOH A 123 319 128 HOH HOH . C 3 HOH A 124 320 130 HOH HOH . C 3 HOH A 125 321 131 HOH HOH . C 3 HOH A 126 322 132 HOH HOH . C 3 HOH A 127 323 133 HOH HOH . C 3 HOH A 128 324 134 HOH HOH . C 3 HOH A 129 325 135 HOH HOH . C 3 HOH A 130 326 136 HOH HOH . C 3 HOH A 131 327 137 HOH HOH . C 3 HOH A 132 328 138 HOH HOH . C 3 HOH A 133 329 139 HOH HOH . C 3 HOH A 134 330 140 HOH HOH . C 3 HOH A 135 331 142 HOH HOH . C 3 HOH A 136 332 143 HOH HOH . C 3 HOH A 137 333 144 HOH HOH . C 3 HOH A 138 334 151 HOH HOH . C 3 HOH A 139 335 152 HOH HOH . C 3 HOH A 140 336 153 HOH HOH . C 3 HOH A 141 337 154 HOH HOH . C 3 HOH A 142 338 155 HOH HOH . C 3 HOH A 143 339 158 HOH HOH . C 3 HOH A 144 340 159 HOH HOH . C 3 HOH A 145 341 161 HOH HOH . C 3 HOH A 146 342 162 HOH HOH . C 3 HOH A 147 343 164 HOH HOH . C 3 HOH A 148 344 165 HOH HOH . C 3 HOH A 149 345 167 HOH HOH . C 3 HOH A 150 346 168 HOH HOH . C 3 HOH A 151 347 169 HOH HOH . C 3 HOH A 152 348 170 HOH HOH . C 3 HOH A 153 349 171 HOH HOH . C 3 HOH A 154 350 172 HOH HOH . C 3 HOH A 155 351 173 HOH HOH . C 3 HOH A 156 352 174 HOH HOH . C 3 HOH A 157 353 175 HOH HOH . C 3 HOH A 158 354 177 HOH HOH . C 3 HOH A 159 355 178 HOH HOH . C 3 HOH A 160 356 179 HOH HOH . C 3 HOH A 161 357 180 HOH HOH . C 3 HOH A 162 358 181 HOH HOH . C 3 HOH A 163 359 182 HOH HOH . C 3 HOH A 164 360 183 HOH HOH . C 3 HOH A 165 361 184 HOH HOH . C 3 HOH A 166 362 185 HOH HOH . C 3 HOH A 167 363 186 HOH HOH . C 3 HOH A 168 364 187 HOH HOH . C 3 HOH A 169 365 190 HOH HOH . C 3 HOH A 170 366 191 HOH HOH . C 3 HOH A 171 367 192 HOH HOH . C 3 HOH A 172 368 193 HOH HOH . C 3 HOH A 173 369 195 HOH HOH . C 3 HOH A 174 370 196 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 29.172 14.819 23.301 1 27.75 ? C1 EDO 196 A 1 HETATM 2 O O1 EDO . . . B 2 28.516 14.097 22.25 1 28.75 ? O1 EDO 196 A 1 HETATM 3 C C2 EDO . . . B 2 29.799 13.829 24.261 1 27.29 ? C2 EDO 196 A 1 HETATM 4 O O2 EDO . . . B 2 28.74 13.015 24.754 1 27.82 ? O2 EDO 196 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #