data_3TYT
#
_model_server_result.job_id            D5DGVx3KdtFfDHCd65lAug 
_model_server_result.datetime_utc      '2024-12-17 08:32:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3tyt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":640}' 
#
_entry.id    3TYT 
#
_exptl.entry_id    3TYT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    11 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3TYT 
_cell.length_a            127.424 
_cell.length_b            127.424 
_cell.length_c            80.652 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TYT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        181 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 1 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_545 x,x-y-1,-z+2/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 63.712 -110.352421 53.768 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             95 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              469 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             95 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              469 
_struct_conn.ptnr2_symmetry                 4_545 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.118 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3TYT 
_atom_sites.fract_transf_matrix[1][1]    0.007848 
_atom_sites.fract_transf_matrix[1][2]    0.004531 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009062 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012399 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 631 631 CL CL . 
C 2 CL A 1 632 632 CL CL . 
D 2 CL A 1 633 633 CL CL . 
E 2 CL A 1 634 634 CL CL . 
F 3 EDO A 1 635 635 EDO EDO . 
G 3 EDO A 1 636 636 EDO EDO . 
H 3 EDO A 1 637 637 EDO EDO . 
I 3 EDO A 1 638 638 EDO EDO . 
J 3 EDO A 1 639 639 EDO EDO . 
K 3 EDO A 1 640 640 EDO EDO . 
L 3 EDO A 1 641 641 EDO EDO . 
M 3 EDO A 1 642 642 EDO EDO . 
N 3 EDO A 1 643 643 EDO EDO . 
O 3 EDO A 1 644 644 EDO EDO . 
P 3 EDO A 1 645 645 EDO EDO . 
Q 4 HOH A 1 646 646 HOH HOH . 
Q 4 HOH A 2 647 647 HOH HOH . 
Q 4 HOH A 3 648 648 HOH HOH . 
Q 4 HOH A 4 649 649 HOH HOH . 
Q 4 HOH A 5 650 650 HOH HOH . 
Q 4 HOH A 6 651 651 HOH HOH . 
Q 4 HOH A 7 652 652 HOH HOH . 
Q 4 HOH A 8 653 653 HOH HOH . 
Q 4 HOH A 9 654 654 HOH HOH . 
Q 4 HOH A 10 655 655 HOH HOH . 
Q 4 HOH A 11 656 656 HOH HOH . 
Q 4 HOH A 12 657 657 HOH HOH . 
Q 4 HOH A 13 658 658 HOH HOH . 
Q 4 HOH A 14 659 659 HOH HOH . 
Q 4 HOH A 15 660 660 HOH HOH . 
Q 4 HOH A 16 661 661 HOH HOH . 
Q 4 HOH A 17 662 662 HOH HOH . 
Q 4 HOH A 18 663 663 HOH HOH . 
Q 4 HOH A 19 664 664 HOH HOH . 
Q 4 HOH A 20 665 665 HOH HOH . 
Q 4 HOH A 21 666 666 HOH HOH . 
Q 4 HOH A 22 667 667 HOH HOH . 
Q 4 HOH A 23 668 668 HOH HOH . 
Q 4 HOH A 24 669 669 HOH HOH . 
Q 4 HOH A 25 670 670 HOH HOH . 
Q 4 HOH A 26 671 671 HOH HOH . 
Q 4 HOH A 27 672 672 HOH HOH . 
Q 4 HOH A 28 673 673 HOH HOH . 
Q 4 HOH A 29 674 674 HOH HOH . 
Q 4 HOH A 30 675 675 HOH HOH . 
Q 4 HOH A 31 676 676 HOH HOH . 
Q 4 HOH A 32 677 677 HOH HOH . 
Q 4 HOH A 33 678 678 HOH HOH . 
Q 4 HOH A 34 679 679 HOH HOH . 
Q 4 HOH A 35 680 680 HOH HOH . 
Q 4 HOH A 36 681 681 HOH HOH . 
Q 4 HOH A 37 682 682 HOH HOH . 
Q 4 HOH A 38 683 683 HOH HOH . 
Q 4 HOH A 39 684 684 HOH HOH . 
Q 4 HOH A 40 685 685 HOH HOH . 
Q 4 HOH A 41 686 686 HOH HOH . 
Q 4 HOH A 42 687 687 HOH HOH . 
Q 4 HOH A 43 688 688 HOH HOH . 
Q 4 HOH A 44 689 689 HOH HOH . 
Q 4 HOH A 45 690 690 HOH HOH . 
Q 4 HOH A 46 691 691 HOH HOH . 
Q 4 HOH A 47 692 692 HOH HOH . 
Q 4 HOH A 48 693 693 HOH HOH . 
Q 4 HOH A 49 694 694 HOH HOH . 
Q 4 HOH A 50 695 695 HOH HOH . 
Q 4 HOH A 51 696 696 HOH HOH . 
Q 4 HOH A 52 697 697 HOH HOH . 
Q 4 HOH A 53 698 698 HOH HOH . 
Q 4 HOH A 54 699 699 HOH HOH . 
Q 4 HOH A 55 700 700 HOH HOH . 
Q 4 HOH A 56 701 701 HOH HOH . 
Q 4 HOH A 57 702 702 HOH HOH . 
Q 4 HOH A 58 703 703 HOH HOH . 
Q 4 HOH A 59 704 704 HOH HOH . 
Q 4 HOH A 60 705 705 HOH HOH . 
Q 4 HOH A 61 706 706 HOH HOH . 
Q 4 HOH A 62 707 707 HOH HOH . 
Q 4 HOH A 63 708 708 HOH HOH . 
Q 4 HOH A 64 709 709 HOH HOH . 
Q 4 HOH A 65 710 710 HOH HOH . 
Q 4 HOH A 66 711 711 HOH HOH . 
Q 4 HOH A 67 712 712 HOH HOH . 
Q 4 HOH A 68 713 713 HOH HOH . 
Q 4 HOH A 69 714 714 HOH HOH . 
Q 4 HOH A 70 715 715 HOH HOH . 
Q 4 HOH A 71 716 716 HOH HOH . 
Q 4 HOH A 72 717 717 HOH HOH . 
Q 4 HOH A 73 718 718 HOH HOH . 
Q 4 HOH A 74 719 719 HOH HOH . 
Q 4 HOH A 75 720 720 HOH HOH . 
Q 4 HOH A 76 721 721 HOH HOH . 
Q 4 HOH A 77 722 722 HOH HOH . 
Q 4 HOH A 78 723 723 HOH HOH . 
Q 4 HOH A 79 724 724 HOH HOH . 
Q 4 HOH A 80 725 725 HOH HOH . 
Q 4 HOH A 81 726 726 HOH HOH . 
Q 4 HOH A 82 727 727 HOH HOH . 
Q 4 HOH A 83 728 728 HOH HOH . 
Q 4 HOH A 84 729 729 HOH HOH . 
Q 4 HOH A 85 730 730 HOH HOH . 
Q 4 HOH A 86 731 731 HOH HOH . 
Q 4 HOH A 87 732 732 HOH HOH . 
Q 4 HOH A 88 733 733 HOH HOH . 
Q 4 HOH A 89 734 734 HOH HOH . 
Q 4 HOH A 90 735 735 HOH HOH . 
Q 4 HOH A 91 736 736 HOH HOH . 
Q 4 HOH A 92 737 737 HOH HOH . 
Q 4 HOH A 93 738 738 HOH HOH . 
Q 4 HOH A 94 739 739 HOH HOH . 
Q 4 HOH A 95 740 740 HOH HOH . 
Q 4 HOH A 96 741 741 HOH HOH . 
Q 4 HOH A 97 742 742 HOH HOH . 
Q 4 HOH A 98 743 743 HOH HOH . 
Q 4 HOH A 99 744 744 HOH HOH . 
Q 4 HOH A 100 745 745 HOH HOH . 
Q 4 HOH A 101 746 746 HOH HOH . 
Q 4 HOH A 102 747 747 HOH HOH . 
Q 4 HOH A 103 748 748 HOH HOH . 
Q 4 HOH A 104 749 749 HOH HOH . 
Q 4 HOH A 105 750 750 HOH HOH . 
Q 4 HOH A 106 751 751 HOH HOH . 
Q 4 HOH A 107 752 752 HOH HOH . 
Q 4 HOH A 108 753 753 HOH HOH . 
Q 4 HOH A 109 754 754 HOH HOH . 
Q 4 HOH A 110 755 755 HOH HOH . 
Q 4 HOH A 111 756 756 HOH HOH . 
Q 4 HOH A 112 757 757 HOH HOH . 
Q 4 HOH A 113 758 758 HOH HOH . 
Q 4 HOH A 114 759 759 HOH HOH . 
Q 4 HOH A 115 760 760 HOH HOH . 
Q 4 HOH A 116 761 761 HOH HOH . 
Q 4 HOH A 117 762 762 HOH HOH . 
Q 4 HOH A 118 763 763 HOH HOH . 
Q 4 HOH A 119 764 764 HOH HOH . 
Q 4 HOH A 120 765 765 HOH HOH . 
Q 4 HOH A 121 766 766 HOH HOH . 
Q 4 HOH A 122 767 767 HOH HOH . 
Q 4 HOH A 123 768 768 HOH HOH . 
Q 4 HOH A 124 769 769 HOH HOH . 
Q 4 HOH A 125 770 770 HOH HOH . 
Q 4 HOH A 126 771 771 HOH HOH . 
Q 4 HOH A 127 772 772 HOH HOH . 
Q 4 HOH A 128 773 773 HOH HOH . 
Q 4 HOH A 129 774 774 HOH HOH . 
Q 4 HOH A 130 775 775 HOH HOH . 
Q 4 HOH A 131 776 776 HOH HOH . 
Q 4 HOH A 132 777 777 HOH HOH . 
Q 4 HOH A 133 778 778 HOH HOH . 
Q 4 HOH A 134 779 779 HOH HOH . 
Q 4 HOH A 135 780 780 HOH HOH . 
Q 4 HOH A 136 781 781 HOH HOH . 
Q 4 HOH A 137 782 782 HOH HOH . 
Q 4 HOH A 138 783 783 HOH HOH . 
Q 4 HOH A 139 784 784 HOH HOH . 
Q 4 HOH A 140 785 785 HOH HOH . 
Q 4 HOH A 141 786 786 HOH HOH . 
Q 4 HOH A 142 787 787 HOH HOH . 
Q 4 HOH A 143 788 788 HOH HOH . 
Q 4 HOH A 144 789 789 HOH HOH . 
Q 4 HOH A 145 790 790 HOH HOH . 
Q 4 HOH A 146 791 791 HOH HOH . 
Q 4 HOH A 147 792 792 HOH HOH . 
Q 4 HOH A 148 793 793 HOH HOH . 
Q 4 HOH A 149 794 794 HOH HOH . 
Q 4 HOH A 150 795 795 HOH HOH . 
Q 4 HOH A 151 796 796 HOH HOH . 
Q 4 HOH A 152 797 797 HOH HOH . 
Q 4 HOH A 153 798 798 HOH HOH . 
Q 4 HOH A 154 799 799 HOH HOH . 
Q 4 HOH A 155 800 800 HOH HOH . 
Q 4 HOH A 156 801 801 HOH HOH . 
Q 4 HOH A 157 802 802 HOH HOH . 
Q 4 HOH A 158 803 803 HOH HOH . 
Q 4 HOH A 159 804 804 HOH HOH . 
Q 4 HOH A 160 805 805 HOH HOH . 
Q 4 HOH A 161 806 806 HOH HOH . 
Q 4 HOH A 162 807 807 HOH HOH . 
Q 4 HOH A 163 808 808 HOH HOH . 
Q 4 HOH A 164 809 809 HOH HOH . 
Q 4 HOH A 165 810 810 HOH HOH . 
Q 4 HOH A 166 811 811 HOH HOH . 
Q 4 HOH A 167 812 812 HOH HOH . 
Q 4 HOH A 168 813 813 HOH HOH . 
Q 4 HOH A 169 814 814 HOH HOH . 
Q 4 HOH A 170 815 815 HOH HOH . 
Q 4 HOH A 171 816 816 HOH HOH . 
Q 4 HOH A 172 817 817 HOH HOH . 
Q 4 HOH A 173 818 818 HOH HOH . 
Q 4 HOH A 174 819 819 HOH HOH . 
Q 4 HOH A 175 820 820 HOH HOH . 
Q 4 HOH A 176 821 821 HOH HOH . 
Q 4 HOH A 177 822 822 HOH HOH . 
Q 4 HOH A 178 823 823 HOH HOH . 
Q 4 HOH A 179 824 824 HOH HOH . 
Q 4 HOH A 180 825 825 HOH HOH . 
Q 4 HOH A 181 826 826 HOH HOH . 
Q 4 HOH A 182 827 827 HOH HOH . 
Q 4 HOH A 183 828 828 HOH HOH . 
Q 4 HOH A 184 829 829 HOH HOH . 
Q 4 HOH A 185 830 830 HOH HOH . 
Q 4 HOH A 186 831 831 HOH HOH . 
Q 4 HOH A 187 832 832 HOH HOH . 
Q 4 HOH A 188 833 833 HOH HOH . 
Q 4 HOH A 189 834 834 HOH HOH . 
Q 4 HOH A 190 835 835 HOH HOH . 
Q 4 HOH A 191 836 836 HOH HOH . 
Q 4 HOH A 192 837 837 HOH HOH . 
Q 4 HOH A 193 838 838 HOH HOH . 
Q 4 HOH A 194 839 839 HOH HOH . 
Q 4 HOH A 195 840 840 HOH HOH . 
Q 4 HOH A 196 841 841 HOH HOH . 
Q 4 HOH A 197 842 842 HOH HOH . 
Q 4 HOH A 198 843 843 HOH HOH . 
Q 4 HOH A 199 844 844 HOH HOH . 
Q 4 HOH A 200 845 845 HOH HOH . 
Q 4 HOH A 201 846 846 HOH HOH . 
Q 4 HOH A 202 847 847 HOH HOH . 
Q 4 HOH A 203 848 848 HOH HOH . 
Q 4 HOH A 204 849 849 HOH HOH . 
Q 4 HOH A 205 850 850 HOH HOH . 
Q 4 HOH A 206 851 851 HOH HOH . 
Q 4 HOH A 207 852 852 HOH HOH . 
Q 4 HOH A 208 853 853 HOH HOH . 
Q 4 HOH A 209 854 854 HOH HOH . 
Q 4 HOH A 210 855 855 HOH HOH . 
Q 4 HOH A 211 856 856 HOH HOH . 
Q 4 HOH A 212 857 857 HOH HOH . 
Q 4 HOH A 213 858 858 HOH HOH . 
Q 4 HOH A 214 859 859 HOH HOH . 
Q 4 HOH A 215 860 860 HOH HOH . 
Q 4 HOH A 216 861 861 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . K 3 59.365 -40.027 27.164 0.4 22.9 ? C1 EDO 640 A 1 
HETATM 2 O O1 EDO . . . K 3 60.692 -39.581 27.495 0.4 30.3 ? O1 EDO 640 A 1 
HETATM 3 C C2 EDO . . . K 3 58.413 -38.961 26.606 0.4 22.63 ? C2 EDO 640 A 1 
HETATM 4 O O2 EDO . . . K 3 59.011 -37.9 25.852 0.4 24.47 ? O2 EDO 640 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           889 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#