data_3TYZ # _model_server_result.job_id blcSoUU1GNORucQP0Wprug _model_server_result.datetime_utc '2024-11-07 22:09:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tyz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":281}' # _entry.id 3TYZ # _exptl.entry_id 3TYZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.75 _cell.angle_gamma 90 _cell.entry_id 3TYZ _cell.length_a 70.179 _cell.length_b 50.522 _cell.length_c 74.668 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TYZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 25 A ASN 22 1_555 F MG MG . A MG 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc2 D O2 POP . A POP 279 1_555 F MG MG . A MG 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc3 D O5 POP . A POP 279 1_555 F MG MG . A MG 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc4 F MG MG . A MG 281 1_555 K O HOH . A HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc5 F MG MG . A MG 281 1_555 K O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc6 F MG MG . A MG 281 1_555 K O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc7 B OD1 ASN 25 B ASN 22 1_555 J MG MG . B MG 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc8 H O2 POP . B POP 279 1_555 J MG MG . B MG 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc9 H O5 POP . B POP 279 1_555 J MG MG . B MG 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc10 J MG MG . B MG 281 1_555 L O HOH . B HOH 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc11 J MG MG . B MG 281 1_555 L O HOH . B HOH 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc12 J MG MG . B MG 281 1_555 L O HOH . B HOH 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3TYZ _atom_sites.fract_transf_matrix[1][1] 0.014249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000185 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019793 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013394 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XHP A 1 278 1 XHP XHP . D 3 POP A 1 279 2 POP POP . E 4 PAB A 1 280 3 PAB PAB . F 5 MG A 1 281 4 MG MG . G 2 XHP B 1 278 1 XHP XHP . H 3 POP B 1 279 2 POP POP . I 4 PAB B 1 280 3 PAB PAB . J 5 MG B 1 281 4 MG MG . K 6 HOH A 1 282 22 HOH HOH . K 6 HOH A 2 283 29 HOH HOH . K 6 HOH A 3 284 30 HOH HOH . K 6 HOH A 4 285 31 HOH HOH . K 6 HOH A 5 286 32 HOH HOH . K 6 HOH A 6 287 33 HOH HOH . K 6 HOH A 7 288 34 HOH HOH . K 6 HOH A 8 289 35 HOH HOH . K 6 HOH A 9 290 36 HOH HOH . K 6 HOH A 10 291 37 HOH HOH . K 6 HOH A 11 292 38 HOH HOH . K 6 HOH A 12 293 39 HOH HOH . K 6 HOH A 13 294 40 HOH HOH . K 6 HOH A 14 295 41 HOH HOH . K 6 HOH A 15 296 42 HOH HOH . K 6 HOH A 16 297 43 HOH HOH . K 6 HOH A 17 298 44 HOH HOH . K 6 HOH A 18 299 45 HOH HOH . K 6 HOH A 19 300 46 HOH HOH . K 6 HOH A 20 301 47 HOH HOH . K 6 HOH A 21 302 48 HOH HOH . K 6 HOH A 22 303 49 HOH HOH . K 6 HOH A 23 304 50 HOH HOH . K 6 HOH A 24 305 51 HOH HOH . K 6 HOH A 25 306 52 HOH HOH . K 6 HOH A 26 307 53 HOH HOH . K 6 HOH A 27 308 54 HOH HOH . K 6 HOH A 28 309 55 HOH HOH . K 6 HOH A 29 310 56 HOH HOH . K 6 HOH A 30 311 57 HOH HOH . K 6 HOH A 31 312 58 HOH HOH . K 6 HOH A 32 313 59 HOH HOH . K 6 HOH A 33 314 60 HOH HOH . K 6 HOH A 34 315 61 HOH HOH . K 6 HOH A 35 316 62 HOH HOH . K 6 HOH A 36 317 63 HOH HOH . K 6 HOH A 37 318 64 HOH HOH . K 6 HOH A 38 319 65 HOH HOH . K 6 HOH A 39 320 66 HOH HOH . K 6 HOH A 40 321 67 HOH HOH . K 6 HOH A 41 322 68 HOH HOH . K 6 HOH A 42 323 69 HOH HOH . K 6 HOH A 43 324 70 HOH HOH . K 6 HOH A 44 325 71 HOH HOH . K 6 HOH A 45 326 72 HOH HOH . K 6 HOH A 46 327 73 HOH HOH . K 6 HOH A 47 328 74 HOH HOH . K 6 HOH A 48 329 75 HOH HOH . K 6 HOH A 49 330 76 HOH HOH . K 6 HOH A 50 331 77 HOH HOH . K 6 HOH A 51 332 78 HOH HOH . K 6 HOH A 52 333 79 HOH HOH . K 6 HOH A 53 334 80 HOH HOH . K 6 HOH A 54 335 81 HOH HOH . K 6 HOH A 55 336 82 HOH HOH . K 6 HOH A 56 337 83 HOH HOH . K 6 HOH A 57 338 84 HOH HOH . K 6 HOH A 58 339 85 HOH HOH . K 6 HOH A 59 340 86 HOH HOH . K 6 HOH A 60 341 87 HOH HOH . K 6 HOH A 61 342 88 HOH HOH . K 6 HOH A 62 343 89 HOH HOH . K 6 HOH A 63 344 90 HOH HOH . K 6 HOH A 64 345 91 HOH HOH . K 6 HOH A 65 346 92 HOH HOH . K 6 HOH A 66 347 93 HOH HOH . K 6 HOH A 67 348 94 HOH HOH . K 6 HOH A 68 349 95 HOH HOH . K 6 HOH A 69 350 96 HOH HOH . K 6 HOH A 70 351 97 HOH HOH . K 6 HOH A 71 352 98 HOH HOH . K 6 HOH A 72 353 99 HOH HOH . K 6 HOH A 73 354 100 HOH HOH . K 6 HOH A 74 355 101 HOH HOH . K 6 HOH A 75 356 102 HOH HOH . K 6 HOH A 76 357 103 HOH HOH . K 6 HOH A 77 358 104 HOH HOH . K 6 HOH A 78 359 105 HOH HOH . K 6 HOH A 79 360 106 HOH HOH . K 6 HOH A 80 361 107 HOH HOH . K 6 HOH A 81 362 108 HOH HOH . K 6 HOH A 82 363 109 HOH HOH . K 6 HOH A 83 364 110 HOH HOH . K 6 HOH A 84 365 111 HOH HOH . K 6 HOH A 85 366 112 HOH HOH . K 6 HOH A 86 367 113 HOH HOH . K 6 HOH A 87 368 114 HOH HOH . K 6 HOH A 88 369 115 HOH HOH . K 6 HOH A 89 370 116 HOH HOH . K 6 HOH A 90 371 117 HOH HOH . K 6 HOH A 91 372 118 HOH HOH . K 6 HOH A 92 373 119 HOH HOH . K 6 HOH A 93 374 120 HOH HOH . K 6 HOH A 94 375 121 HOH HOH . K 6 HOH A 95 376 122 HOH HOH . K 6 HOH A 96 377 123 HOH HOH . K 6 HOH A 97 378 124 HOH HOH . K 6 HOH A 98 379 125 HOH HOH . K 6 HOH A 99 380 126 HOH HOH . K 6 HOH A 100 381 127 HOH HOH . K 6 HOH A 101 382 128 HOH HOH . K 6 HOH A 102 383 129 HOH HOH . K 6 HOH A 103 384 130 HOH HOH . K 6 HOH A 104 385 131 HOH HOH . K 6 HOH A 105 386 132 HOH HOH . K 6 HOH A 106 387 133 HOH HOH . K 6 HOH A 107 388 134 HOH HOH . K 6 HOH A 108 389 135 HOH HOH . K 6 HOH A 109 390 136 HOH HOH . K 6 HOH A 110 391 137 HOH HOH . K 6 HOH A 111 392 140 HOH HOH . K 6 HOH A 112 393 141 HOH HOH . K 6 HOH A 113 394 142 HOH HOH . K 6 HOH A 114 395 143 HOH HOH . K 6 HOH A 115 396 144 HOH HOH . K 6 HOH A 116 397 145 HOH HOH . K 6 HOH A 117 398 146 HOH HOH . K 6 HOH A 118 399 147 HOH HOH . K 6 HOH A 119 400 148 HOH HOH . K 6 HOH A 120 401 161 HOH HOH . K 6 HOH A 121 402 162 HOH HOH . K 6 HOH A 122 403 163 HOH HOH . K 6 HOH A 123 404 164 HOH HOH . K 6 HOH A 124 405 165 HOH HOH . K 6 HOH A 125 406 166 HOH HOH . K 6 HOH A 126 407 167 HOH HOH . K 6 HOH A 127 408 168 HOH HOH . K 6 HOH A 128 409 169 HOH HOH . K 6 HOH A 129 410 170 HOH HOH . K 6 HOH A 130 411 171 HOH HOH . K 6 HOH A 131 412 172 HOH HOH . K 6 HOH A 132 413 173 HOH HOH . K 6 HOH A 133 414 174 HOH HOH . K 6 HOH A 134 415 175 HOH HOH . K 6 HOH A 135 416 176 HOH HOH . K 6 HOH A 136 417 177 HOH HOH . K 6 HOH A 137 418 178 HOH HOH . K 6 HOH A 138 419 179 HOH HOH . K 6 HOH A 139 420 183 HOH HOH . K 6 HOH A 140 421 184 HOH HOH . K 6 HOH A 141 422 185 HOH HOH . K 6 HOH A 142 423 186 HOH HOH . K 6 HOH A 143 424 187 HOH HOH . K 6 HOH A 144 425 188 HOH HOH . K 6 HOH A 145 426 189 HOH HOH . K 6 HOH A 146 427 190 HOH HOH . K 6 HOH A 147 428 191 HOH HOH . K 6 HOH A 148 429 192 HOH HOH . K 6 HOH A 149 430 193 HOH HOH . K 6 HOH A 150 431 194 HOH HOH . K 6 HOH A 151 432 195 HOH HOH . K 6 HOH A 152 433 196 HOH HOH . K 6 HOH A 153 434 197 HOH HOH . K 6 HOH A 154 435 198 HOH HOH . K 6 HOH A 155 436 199 HOH HOH . K 6 HOH A 156 437 200 HOH HOH . K 6 HOH A 157 438 201 HOH HOH . K 6 HOH A 158 439 202 HOH HOH . K 6 HOH A 159 440 203 HOH HOH . K 6 HOH A 160 441 204 HOH HOH . K 6 HOH A 161 442 205 HOH HOH . K 6 HOH A 162 443 206 HOH HOH . K 6 HOH A 163 444 218 HOH HOH . K 6 HOH A 164 445 219 HOH HOH . K 6 HOH A 165 446 230 HOH HOH . K 6 HOH A 166 447 237 HOH HOH . K 6 HOH A 167 448 238 HOH HOH . K 6 HOH A 168 449 239 HOH HOH . K 6 HOH A 169 450 240 HOH HOH . K 6 HOH A 170 451 241 HOH HOH . K 6 HOH A 171 452 242 HOH HOH . K 6 HOH A 172 453 243 HOH HOH . K 6 HOH A 173 454 244 HOH HOH . K 6 HOH A 174 455 245 HOH HOH . K 6 HOH A 175 456 246 HOH HOH . K 6 HOH A 176 457 247 HOH HOH . K 6 HOH A 177 458 248 HOH HOH . K 6 HOH A 178 459 249 HOH HOH . K 6 HOH A 179 460 250 HOH HOH . K 6 HOH A 180 461 251 HOH HOH . K 6 HOH A 181 462 252 HOH HOH . K 6 HOH A 182 463 253 HOH HOH . K 6 HOH A 183 464 254 HOH HOH . K 6 HOH A 184 465 255 HOH HOH . K 6 HOH A 185 466 155 HOH HOH . L 6 HOH B 1 282 1 HOH HOH . L 6 HOH B 2 283 2 HOH HOH . L 6 HOH B 3 284 3 HOH HOH . L 6 HOH B 4 285 4 HOH HOH . L 6 HOH B 5 286 5 HOH HOH . L 6 HOH B 6 287 6 HOH HOH . L 6 HOH B 7 288 7 HOH HOH . L 6 HOH B 8 289 8 HOH HOH . L 6 HOH B 9 290 9 HOH HOH . L 6 HOH B 10 291 10 HOH HOH . L 6 HOH B 11 292 11 HOH HOH . L 6 HOH B 12 293 12 HOH HOH . L 6 HOH B 13 294 13 HOH HOH . L 6 HOH B 14 295 14 HOH HOH . L 6 HOH B 15 296 15 HOH HOH . L 6 HOH B 16 297 16 HOH HOH . L 6 HOH B 17 298 17 HOH HOH . L 6 HOH B 18 299 18 HOH HOH . L 6 HOH B 19 300 19 HOH HOH . L 6 HOH B 20 301 20 HOH HOH . L 6 HOH B 21 302 21 HOH HOH . L 6 HOH B 22 303 23 HOH HOH . L 6 HOH B 23 304 24 HOH HOH . L 6 HOH B 24 305 25 HOH HOH . L 6 HOH B 25 306 26 HOH HOH . L 6 HOH B 26 307 27 HOH HOH . L 6 HOH B 27 308 28 HOH HOH . L 6 HOH B 28 309 138 HOH HOH . L 6 HOH B 29 310 139 HOH HOH . L 6 HOH B 30 311 149 HOH HOH . L 6 HOH B 31 312 150 HOH HOH . L 6 HOH B 32 313 151 HOH HOH . L 6 HOH B 33 314 152 HOH HOH . L 6 HOH B 34 315 153 HOH HOH . L 6 HOH B 35 316 154 HOH HOH . L 6 HOH B 36 318 156 HOH HOH . L 6 HOH B 37 319 157 HOH HOH . L 6 HOH B 38 320 158 HOH HOH . L 6 HOH B 39 321 159 HOH HOH . L 6 HOH B 40 322 160 HOH HOH . L 6 HOH B 41 323 180 HOH HOH . L 6 HOH B 42 324 181 HOH HOH . L 6 HOH B 43 325 182 HOH HOH . L 6 HOH B 44 326 207 HOH HOH . L 6 HOH B 45 327 208 HOH HOH . L 6 HOH B 46 328 209 HOH HOH . L 6 HOH B 47 329 210 HOH HOH . L 6 HOH B 48 330 211 HOH HOH . L 6 HOH B 49 331 212 HOH HOH . L 6 HOH B 50 332 213 HOH HOH . L 6 HOH B 51 333 214 HOH HOH . L 6 HOH B 52 334 215 HOH HOH . L 6 HOH B 53 335 216 HOH HOH . L 6 HOH B 54 336 217 HOH HOH . L 6 HOH B 55 337 220 HOH HOH . L 6 HOH B 56 338 221 HOH HOH . L 6 HOH B 57 339 222 HOH HOH . L 6 HOH B 58 340 223 HOH HOH . L 6 HOH B 59 341 224 HOH HOH . L 6 HOH B 60 342 225 HOH HOH . L 6 HOH B 61 343 226 HOH HOH . L 6 HOH B 62 344 227 HOH HOH . L 6 HOH B 63 345 228 HOH HOH . L 6 HOH B 64 346 229 HOH HOH . L 6 HOH B 65 347 231 HOH HOH . L 6 HOH B 66 348 232 HOH HOH . L 6 HOH B 67 349 233 HOH HOH . L 6 HOH B 68 350 234 HOH HOH . L 6 HOH B 69 351 235 HOH HOH . L 6 HOH B 70 352 236 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 5 _atom_site.Cartn_x 16.916 _atom_site.Cartn_y 12.662 _atom_site.Cartn_z 46.197 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.94 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 281 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #