data_3TZ4 # _model_server_result.job_id RKFhOzfiRs7Wvez5X2tLHQ _model_server_result.datetime_utc '2024-11-25 05:39:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tz4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":391}' # _entry.id 3TZ4 # _exptl.entry_id 3TZ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3TZ4 _cell.length_a 127.953 _cell.length_b 127.953 _cell.length_c 73.399 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TZ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1,2 A,B,C,D,E,F 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 279 A ASN 249 1_555 D MG MG . A MG 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc2 A O VAL 328 A VAL 298 1_555 E K K . A K 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.905 ? metalc ? metalc3 A O ASP 330 A ASP 300 1_555 E K K . A K 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.873 ? metalc ? metalc4 A O PHE 333 A PHE 303 1_555 E K K . A K 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.923 ? metalc ? metalc5 A O GLY 367 A GLY 337 1_555 E K K . A K 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.991 ? metalc ? metalc6 B O1A ADP . A ADP 389 1_555 D MG MG . A MG 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc7 B O1B ADP . A ADP 389 1_555 D MG MG . A MG 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc8 B O2A ADP . A ADP 389 1_555 E K K . A K 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.881 ? metalc ? metalc9 D MG MG . A MG 391 1_555 F O HOH . A HOH 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc10 D MG MG . A MG 391 1_555 F O HOH . A HOH 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc11 D MG MG . A MG 391 1_555 F O HOH . A HOH 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3TZ4 _atom_sites.fract_transf_matrix[1][1] 0.007815 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007815 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013624 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 389 1 ADP ADP . C 3 03H A 1 390 1 03H 03H . D 4 MG A 1 391 1 MG MG . E 5 K A 1 392 1 K K . F 6 HOH A 1 393 1 HOH HOH . F 6 HOH A 2 394 2 HOH HOH . F 6 HOH A 3 395 3 HOH HOH . F 6 HOH A 4 396 4 HOH HOH . F 6 HOH A 5 397 5 HOH HOH . F 6 HOH A 6 398 6 HOH HOH . F 6 HOH A 7 399 7 HOH HOH . F 6 HOH A 8 400 8 HOH HOH . F 6 HOH A 9 401 9 HOH HOH . F 6 HOH A 10 402 10 HOH HOH . F 6 HOH A 11 403 11 HOH HOH . F 6 HOH A 12 404 12 HOH HOH . F 6 HOH A 13 405 13 HOH HOH . F 6 HOH A 14 406 14 HOH HOH . F 6 HOH A 15 407 15 HOH HOH . F 6 HOH A 16 408 16 HOH HOH . F 6 HOH A 17 409 17 HOH HOH . F 6 HOH A 18 410 18 HOH HOH . F 6 HOH A 19 411 19 HOH HOH . F 6 HOH A 20 412 20 HOH HOH . F 6 HOH A 21 413 21 HOH HOH . F 6 HOH A 22 414 22 HOH HOH . F 6 HOH A 23 415 23 HOH HOH . F 6 HOH A 24 416 24 HOH HOH . F 6 HOH A 25 417 25 HOH HOH . F 6 HOH A 26 418 26 HOH HOH . F 6 HOH A 27 419 27 HOH HOH . F 6 HOH A 28 420 28 HOH HOH . F 6 HOH A 29 421 29 HOH HOH . F 6 HOH A 30 422 30 HOH HOH . F 6 HOH A 31 423 31 HOH HOH . F 6 HOH A 32 424 32 HOH HOH . F 6 HOH A 33 425 33 HOH HOH . F 6 HOH A 34 426 34 HOH HOH . F 6 HOH A 35 427 35 HOH HOH . F 6 HOH A 36 428 36 HOH HOH . F 6 HOH A 37 429 37 HOH HOH . F 6 HOH A 38 430 38 HOH HOH . F 6 HOH A 39 431 39 HOH HOH . F 6 HOH A 40 432 40 HOH HOH . F 6 HOH A 41 433 41 HOH HOH . F 6 HOH A 42 434 42 HOH HOH . F 6 HOH A 43 435 43 HOH HOH . F 6 HOH A 44 436 44 HOH HOH . F 6 HOH A 45 437 46 HOH HOH . F 6 HOH A 46 438 47 HOH HOH . F 6 HOH A 47 439 48 HOH HOH . F 6 HOH A 48 440 49 HOH HOH . F 6 HOH A 49 441 50 HOH HOH . F 6 HOH A 50 442 51 HOH HOH . F 6 HOH A 51 443 52 HOH HOH . F 6 HOH A 52 444 53 HOH HOH . F 6 HOH A 53 445 54 HOH HOH . F 6 HOH A 54 446 55 HOH HOH . F 6 HOH A 55 447 56 HOH HOH . F 6 HOH A 56 448 57 HOH HOH . F 6 HOH A 57 449 58 HOH HOH . F 6 HOH A 58 450 59 HOH HOH . F 6 HOH A 59 451 60 HOH HOH . F 6 HOH A 60 452 61 HOH HOH . F 6 HOH A 61 453 62 HOH HOH . F 6 HOH A 62 454 63 HOH HOH . F 6 HOH A 63 455 64 HOH HOH . F 6 HOH A 64 456 65 HOH HOH . F 6 HOH A 65 457 66 HOH HOH . F 6 HOH A 66 458 67 HOH HOH . F 6 HOH A 67 459 68 HOH HOH . F 6 HOH A 68 460 69 HOH HOH . F 6 HOH A 69 461 70 HOH HOH . F 6 HOH A 70 462 71 HOH HOH . F 6 HOH A 71 463 72 HOH HOH . F 6 HOH A 72 464 73 HOH HOH . F 6 HOH A 73 465 74 HOH HOH . F 6 HOH A 74 466 75 HOH HOH . F 6 HOH A 75 467 77 HOH HOH . F 6 HOH A 76 468 79 HOH HOH . F 6 HOH A 77 469 81 HOH HOH . F 6 HOH A 78 470 82 HOH HOH . F 6 HOH A 79 471 83 HOH HOH . F 6 HOH A 80 472 84 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 6.587 _atom_site.Cartn_y -33.216 _atom_site.Cartn_z -1.951 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 51.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 391 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #