data_3TZF # _model_server_result.job_id 9LA0vk_MMEN3ce5N0DXeWA _model_server_result.datetime_utc '2024-11-07 21:54:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tzf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":279}' # _entry.id 3TZF # _exptl.entry_id 3TZF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.8 _cell.angle_gamma 90 _cell.entry_id 3TZF _cell.length_a 70.245 _cell.length_b 50.582 _cell.length_c 74.988 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TZF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 25 A ASN 22 1_555 D MG MG . A MG 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc2 C O1P HH2 . A HH2 278 1_555 D MG MG . A MG 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc3 C O5P HH2 . A HH2 278 1_555 D MG MG . A MG 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc4 D MG MG . A MG 279 1_555 H O HOH . A HOH 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc5 D MG MG . A MG 279 1_555 H O HOH . A HOH 352 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc6 D MG MG . A MG 279 1_555 H O HOH . A HOH 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc7 B OD1 ASN 25 B ASN 22 1_555 F MG MG . B MG 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc8 E O4P HH2 . B HH2 278 1_555 F MG MG . B MG 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc9 E O1P HH2 . B HH2 278 1_555 F MG MG . B MG 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc10 F MG MG . B MG 279 1_555 I O HOH . B HOH 298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc11 F MG MG . B MG 279 1_555 I O HOH . B HOH 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc12 F MG MG . B MG 279 1_555 I O HOH . B HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3TZF _atom_sites.fract_transf_matrix[1][1] 0.014236 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000199 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01977 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013337 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HH2 A 1 278 1 HH2 HH2 . D 3 MG A 1 279 2 MG MG . E 2 HH2 B 1 278 1 HH2 HH2 . F 3 MG B 1 279 2 MG MG . G 4 08D B 1 280 3 08D 08D . H 5 HOH A 1 280 1 HOH HOH . H 5 HOH A 2 281 2 HOH HOH . H 5 HOH A 3 282 4 HOH HOH . H 5 HOH A 4 283 5 HOH HOH . H 5 HOH A 5 284 6 HOH HOH . H 5 HOH A 6 285 7 HOH HOH . H 5 HOH A 7 286 8 HOH HOH . H 5 HOH A 8 287 9 HOH HOH . H 5 HOH A 9 288 10 HOH HOH . H 5 HOH A 10 289 11 HOH HOH . H 5 HOH A 11 290 13 HOH HOH . H 5 HOH A 12 291 14 HOH HOH . H 5 HOH A 13 292 15 HOH HOH . H 5 HOH A 14 293 16 HOH HOH . H 5 HOH A 15 294 17 HOH HOH . H 5 HOH A 16 295 20 HOH HOH . H 5 HOH A 17 296 21 HOH HOH . H 5 HOH A 18 297 22 HOH HOH . H 5 HOH A 19 298 24 HOH HOH . H 5 HOH A 20 299 25 HOH HOH . H 5 HOH A 21 300 27 HOH HOH . H 5 HOH A 22 301 28 HOH HOH . H 5 HOH A 23 302 29 HOH HOH . H 5 HOH A 24 303 30 HOH HOH . H 5 HOH A 25 304 32 HOH HOH . H 5 HOH A 26 305 33 HOH HOH . H 5 HOH A 27 306 34 HOH HOH . H 5 HOH A 28 307 35 HOH HOH . H 5 HOH A 29 308 36 HOH HOH . H 5 HOH A 30 309 37 HOH HOH . H 5 HOH A 31 310 39 HOH HOH . H 5 HOH A 32 311 42 HOH HOH . H 5 HOH A 33 312 44 HOH HOH . H 5 HOH A 34 313 45 HOH HOH . H 5 HOH A 35 314 46 HOH HOH . H 5 HOH A 36 315 47 HOH HOH . H 5 HOH A 37 316 48 HOH HOH . H 5 HOH A 38 317 49 HOH HOH . H 5 HOH A 39 318 50 HOH HOH . H 5 HOH A 40 319 51 HOH HOH . H 5 HOH A 41 320 53 HOH HOH . H 5 HOH A 42 321 54 HOH HOH . H 5 HOH A 43 322 55 HOH HOH . H 5 HOH A 44 323 57 HOH HOH . H 5 HOH A 45 324 58 HOH HOH . H 5 HOH A 46 325 60 HOH HOH . H 5 HOH A 47 326 61 HOH HOH . H 5 HOH A 48 327 63 HOH HOH . H 5 HOH A 49 328 64 HOH HOH . H 5 HOH A 50 329 65 HOH HOH . H 5 HOH A 51 330 66 HOH HOH . H 5 HOH A 52 331 67 HOH HOH . H 5 HOH A 53 332 68 HOH HOH . H 5 HOH A 54 333 69 HOH HOH . H 5 HOH A 55 334 70 HOH HOH . H 5 HOH A 56 335 71 HOH HOH . H 5 HOH A 57 336 72 HOH HOH . H 5 HOH A 58 337 73 HOH HOH . H 5 HOH A 59 338 74 HOH HOH . H 5 HOH A 60 339 75 HOH HOH . H 5 HOH A 61 340 76 HOH HOH . H 5 HOH A 62 341 77 HOH HOH . H 5 HOH A 63 342 78 HOH HOH . H 5 HOH A 64 343 79 HOH HOH . H 5 HOH A 65 344 80 HOH HOH . H 5 HOH A 66 345 81 HOH HOH . H 5 HOH A 67 346 82 HOH HOH . H 5 HOH A 68 347 83 HOH HOH . H 5 HOH A 69 348 84 HOH HOH . H 5 HOH A 70 349 86 HOH HOH . H 5 HOH A 71 350 87 HOH HOH . H 5 HOH A 72 351 89 HOH HOH . H 5 HOH A 73 352 90 HOH HOH . H 5 HOH A 74 353 91 HOH HOH . H 5 HOH A 75 354 95 HOH HOH . H 5 HOH A 76 355 96 HOH HOH . H 5 HOH A 77 356 97 HOH HOH . H 5 HOH A 78 357 98 HOH HOH . H 5 HOH A 79 358 100 HOH HOH . H 5 HOH A 80 359 102 HOH HOH . H 5 HOH A 81 360 103 HOH HOH . H 5 HOH A 82 361 104 HOH HOH . H 5 HOH A 83 362 105 HOH HOH . H 5 HOH A 84 363 106 HOH HOH . H 5 HOH A 85 364 107 HOH HOH . H 5 HOH A 86 365 108 HOH HOH . H 5 HOH A 87 366 109 HOH HOH . H 5 HOH A 88 367 110 HOH HOH . H 5 HOH A 89 368 111 HOH HOH . H 5 HOH A 90 369 112 HOH HOH . H 5 HOH A 91 370 113 HOH HOH . H 5 HOH A 92 371 114 HOH HOH . H 5 HOH A 93 372 115 HOH HOH . H 5 HOH A 94 373 116 HOH HOH . H 5 HOH A 95 374 117 HOH HOH . H 5 HOH A 96 375 118 HOH HOH . H 5 HOH A 97 376 119 HOH HOH . H 5 HOH A 98 377 120 HOH HOH . H 5 HOH A 99 378 121 HOH HOH . H 5 HOH A 100 379 122 HOH HOH . H 5 HOH A 101 380 123 HOH HOH . H 5 HOH A 102 381 124 HOH HOH . H 5 HOH A 103 382 125 HOH HOH . H 5 HOH A 104 383 126 HOH HOH . H 5 HOH A 105 384 127 HOH HOH . H 5 HOH A 106 385 128 HOH HOH . H 5 HOH A 107 386 129 HOH HOH . H 5 HOH A 108 387 135 HOH HOH . H 5 HOH A 109 388 138 HOH HOH . H 5 HOH A 110 389 139 HOH HOH . H 5 HOH A 111 390 140 HOH HOH . H 5 HOH A 112 391 141 HOH HOH . H 5 HOH A 113 392 142 HOH HOH . H 5 HOH A 114 393 143 HOH HOH . H 5 HOH A 115 394 144 HOH HOH . H 5 HOH A 116 395 151 HOH HOH . H 5 HOH A 117 396 154 HOH HOH . H 5 HOH A 118 397 155 HOH HOH . H 5 HOH A 119 398 164 HOH HOH . H 5 HOH A 120 399 165 HOH HOH . H 5 HOH A 121 400 166 HOH HOH . H 5 HOH A 122 401 172 HOH HOH . H 5 HOH A 123 402 173 HOH HOH . H 5 HOH A 124 403 174 HOH HOH . H 5 HOH A 125 404 175 HOH HOH . H 5 HOH A 126 405 176 HOH HOH . H 5 HOH A 127 406 177 HOH HOH . H 5 HOH A 128 407 178 HOH HOH . H 5 HOH A 129 408 179 HOH HOH . H 5 HOH A 130 409 180 HOH HOH . H 5 HOH A 131 410 181 HOH HOH . H 5 HOH A 132 411 182 HOH HOH . H 5 HOH A 133 412 183 HOH HOH . H 5 HOH A 134 413 184 HOH HOH . H 5 HOH A 135 414 185 HOH HOH . H 5 HOH A 136 415 186 HOH HOH . H 5 HOH A 137 416 187 HOH HOH . H 5 HOH A 138 417 188 HOH HOH . H 5 HOH A 139 418 189 HOH HOH . H 5 HOH A 140 419 190 HOH HOH . H 5 HOH A 141 420 191 HOH HOH . H 5 HOH A 142 421 202 HOH HOH . H 5 HOH A 143 422 205 HOH HOH . H 5 HOH A 144 423 209 HOH HOH . I 5 HOH B 1 281 3 HOH HOH . I 5 HOH B 2 282 12 HOH HOH . I 5 HOH B 3 283 18 HOH HOH . I 5 HOH B 4 284 23 HOH HOH . I 5 HOH B 5 285 26 HOH HOH . I 5 HOH B 6 286 31 HOH HOH . I 5 HOH B 7 287 38 HOH HOH . I 5 HOH B 8 288 40 HOH HOH . I 5 HOH B 9 289 41 HOH HOH . I 5 HOH B 10 290 43 HOH HOH . I 5 HOH B 11 291 52 HOH HOH . I 5 HOH B 12 292 56 HOH HOH . I 5 HOH B 13 293 59 HOH HOH . I 5 HOH B 14 294 62 HOH HOH . I 5 HOH B 15 295 85 HOH HOH . I 5 HOH B 16 296 88 HOH HOH . I 5 HOH B 17 297 92 HOH HOH . I 5 HOH B 18 298 93 HOH HOH . I 5 HOH B 19 299 94 HOH HOH . I 5 HOH B 20 300 99 HOH HOH . I 5 HOH B 21 301 101 HOH HOH . I 5 HOH B 22 302 130 HOH HOH . I 5 HOH B 23 303 131 HOH HOH . I 5 HOH B 24 304 132 HOH HOH . I 5 HOH B 25 305 133 HOH HOH . I 5 HOH B 26 306 134 HOH HOH . I 5 HOH B 27 307 136 HOH HOH . I 5 HOH B 28 308 137 HOH HOH . I 5 HOH B 29 309 145 HOH HOH . I 5 HOH B 30 310 146 HOH HOH . I 5 HOH B 31 311 148 HOH HOH . I 5 HOH B 32 312 149 HOH HOH . I 5 HOH B 33 313 150 HOH HOH . I 5 HOH B 34 314 152 HOH HOH . I 5 HOH B 35 315 153 HOH HOH . I 5 HOH B 36 316 156 HOH HOH . I 5 HOH B 37 317 157 HOH HOH . I 5 HOH B 38 318 158 HOH HOH . I 5 HOH B 39 319 159 HOH HOH . I 5 HOH B 40 320 160 HOH HOH . I 5 HOH B 41 321 161 HOH HOH . I 5 HOH B 42 322 162 HOH HOH . I 5 HOH B 43 323 163 HOH HOH . I 5 HOH B 44 324 167 HOH HOH . I 5 HOH B 45 325 168 HOH HOH . I 5 HOH B 46 326 169 HOH HOH . I 5 HOH B 47 327 170 HOH HOH . I 5 HOH B 48 328 171 HOH HOH . I 5 HOH B 49 329 192 HOH HOH . I 5 HOH B 50 330 193 HOH HOH . I 5 HOH B 51 331 194 HOH HOH . I 5 HOH B 52 332 195 HOH HOH . I 5 HOH B 53 333 196 HOH HOH . I 5 HOH B 54 334 197 HOH HOH . I 5 HOH B 55 335 198 HOH HOH . I 5 HOH B 56 336 199 HOH HOH . I 5 HOH B 57 337 200 HOH HOH . I 5 HOH B 58 338 201 HOH HOH . I 5 HOH B 59 339 203 HOH HOH . I 5 HOH B 60 340 204 HOH HOH . I 5 HOH B 61 341 206 HOH HOH . I 5 HOH B 62 342 207 HOH HOH . I 5 HOH B 63 343 208 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 16.938 _atom_site.Cartn_y 12.674 _atom_site.Cartn_z 46.392 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.56 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 279 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #