data_3TZZ # _model_server_result.job_id APyLCVgg_dQreyXv9XEdyA _model_server_result.datetime_utc '2024-11-28 18:41:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tzz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":2002}' # _entry.id 3TZZ # _exptl.entry_id 3TZZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3TZZ _cell.length_a 106.331 _cell.length_b 106.331 _cell.length_c 261.688 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TZZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,P 1 1 B,C,J,K,L,M,N,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 K N N ? 4 L N N ? 4 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 230 A SER 801 1_555 D C1 XPM . A XPM 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 B OG SER 230 B SER 801 1_555 J C1 XPM . B XPM 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3TZZ _atom_sites.fract_transf_matrix[1][1] 0.009405 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009405 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003821 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 XPM A 1 2001 2001 XPM XPM . E 4 GOL A 1 2002 4 GOL GOL . F 4 GOL A 1 2003 5 GOL GOL . G 4 GOL A 1 2004 6 GOL GOL . H 4 GOL A 1 2005 7 GOL GOL . I 5 PG0 A 1 2006 12 PG0 PG0 . J 3 XPM B 1 2001 2001 XPM XPM . K 4 GOL B 1 2002 1 GOL GOL . L 4 GOL B 1 2003 2 GOL GOL . M 4 GOL B 1 2004 3 GOL GOL . N 6 SO4 B 1 2005 9 SO4 SO4 . O 6 SO4 C 1 101 13 SO4 SO4 . P 7 HOH A 1 2101 1 HOH HOH . P 7 HOH A 2 2102 2 HOH HOH . P 7 HOH A 3 2103 3 HOH HOH . P 7 HOH A 4 2104 9 HOH HOH . P 7 HOH A 5 2105 10 HOH HOH . P 7 HOH A 6 2106 11 HOH HOH . P 7 HOH A 7 2107 13 HOH HOH . P 7 HOH A 8 2108 15 HOH HOH . P 7 HOH A 9 2109 16 HOH HOH . P 7 HOH A 10 2110 19 HOH HOH . P 7 HOH A 11 2111 20 HOH HOH . P 7 HOH A 12 2112 23 HOH HOH . P 7 HOH A 13 2113 24 HOH HOH . P 7 HOH A 14 2114 25 HOH HOH . P 7 HOH A 15 2115 26 HOH HOH . P 7 HOH A 16 2116 30 HOH HOH . P 7 HOH A 17 2117 31 HOH HOH . P 7 HOH A 18 2118 32 HOH HOH . P 7 HOH A 19 2119 33 HOH HOH . P 7 HOH A 20 2120 34 HOH HOH . P 7 HOH A 21 2121 35 HOH HOH . P 7 HOH A 22 2122 37 HOH HOH . P 7 HOH A 23 2123 39 HOH HOH . P 7 HOH A 24 2124 41 HOH HOH . P 7 HOH A 25 2125 42 HOH HOH . P 7 HOH A 26 2126 43 HOH HOH . P 7 HOH A 27 2127 44 HOH HOH . P 7 HOH A 28 2128 46 HOH HOH . P 7 HOH A 29 2129 49 HOH HOH . P 7 HOH A 30 2130 50 HOH HOH . P 7 HOH A 31 2131 51 HOH HOH . P 7 HOH A 32 2132 54 HOH HOH . P 7 HOH A 33 2133 55 HOH HOH . P 7 HOH A 34 2134 62 HOH HOH . P 7 HOH A 35 2135 63 HOH HOH . P 7 HOH A 36 2136 64 HOH HOH . P 7 HOH A 37 2137 65 HOH HOH . P 7 HOH A 38 2138 68 HOH HOH . P 7 HOH A 39 2139 69 HOH HOH . P 7 HOH A 40 2140 70 HOH HOH . P 7 HOH A 41 2141 71 HOH HOH . P 7 HOH A 42 2142 72 HOH HOH . P 7 HOH A 43 2143 75 HOH HOH . P 7 HOH A 44 2144 76 HOH HOH . P 7 HOH A 45 2145 77 HOH HOH . P 7 HOH A 46 2146 78 HOH HOH . P 7 HOH A 47 2147 81 HOH HOH . P 7 HOH A 48 2148 82 HOH HOH . P 7 HOH A 49 2149 83 HOH HOH . P 7 HOH A 50 2150 84 HOH HOH . P 7 HOH A 51 2151 85 HOH HOH . P 7 HOH A 52 2152 86 HOH HOH . P 7 HOH A 53 2153 87 HOH HOH . P 7 HOH A 54 2154 88 HOH HOH . P 7 HOH A 55 2155 89 HOH HOH . P 7 HOH A 56 2156 92 HOH HOH . P 7 HOH A 57 2157 93 HOH HOH . P 7 HOH A 58 2158 94 HOH HOH . P 7 HOH A 59 2159 96 HOH HOH . P 7 HOH A 60 2160 98 HOH HOH . P 7 HOH A 61 2161 99 HOH HOH . P 7 HOH A 62 2162 1063 HOH HOH . P 7 HOH A 63 2163 1064 HOH HOH . P 7 HOH A 64 2164 1065 HOH HOH . Q 7 HOH B 1 2101 5 HOH HOH . Q 7 HOH B 2 2102 8 HOH HOH . Q 7 HOH B 3 2103 12 HOH HOH . Q 7 HOH B 4 2104 14 HOH HOH . Q 7 HOH B 5 2105 17 HOH HOH . Q 7 HOH B 6 2106 18 HOH HOH . Q 7 HOH B 7 2107 21 HOH HOH . Q 7 HOH B 8 2108 22 HOH HOH . Q 7 HOH B 9 2109 27 HOH HOH . Q 7 HOH B 10 2110 28 HOH HOH . Q 7 HOH B 11 2111 29 HOH HOH . Q 7 HOH B 12 2112 36 HOH HOH . Q 7 HOH B 13 2113 38 HOH HOH . Q 7 HOH B 14 2114 40 HOH HOH . Q 7 HOH B 15 2115 45 HOH HOH . Q 7 HOH B 16 2116 47 HOH HOH . Q 7 HOH B 17 2117 48 HOH HOH . Q 7 HOH B 18 2118 52 HOH HOH . Q 7 HOH B 19 2119 53 HOH HOH . Q 7 HOH B 20 2120 56 HOH HOH . Q 7 HOH B 21 2121 57 HOH HOH . Q 7 HOH B 22 2122 58 HOH HOH . Q 7 HOH B 23 2123 59 HOH HOH . Q 7 HOH B 24 2124 60 HOH HOH . Q 7 HOH B 25 2125 61 HOH HOH . Q 7 HOH B 26 2126 66 HOH HOH . Q 7 HOH B 27 2127 67 HOH HOH . Q 7 HOH B 28 2128 73 HOH HOH . Q 7 HOH B 29 2129 74 HOH HOH . Q 7 HOH B 30 2130 79 HOH HOH . Q 7 HOH B 31 2131 80 HOH HOH . Q 7 HOH B 32 2132 90 HOH HOH . Q 7 HOH B 33 2133 91 HOH HOH . Q 7 HOH B 34 2134 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 7.352 -23.507 -66.71 1 48.56 ? C1 GOL 2002 A 1 HETATM 2 O O1 GOL . . . E 4 6.303 -23.064 -67.601 1 45.31 ? O1 GOL 2002 A 1 HETATM 3 C C2 GOL . . . E 4 7.554 -25.02 -66.853 1 45.56 ? C2 GOL 2002 A 1 HETATM 4 O O2 GOL . . . E 4 6.256 -25.6 -66.87 1 42.82 ? O2 GOL 2002 A 1 HETATM 5 C C3 GOL . . . E 4 8.353 -25.63 -65.699 1 43.79 ? C3 GOL 2002 A 1 HETATM 6 O O3 GOL . . . E 4 9.597 -26.201 -66.132 1 44.86 ? O3 GOL 2002 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #