data_3U0U # _model_server_result.job_id QIf1TclbXuTEtcADOz1fCQ _model_server_result.datetime_utc '2024-12-16 06:51:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3u0u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":14}' # _entry.id 3U0U # _exptl.entry_id 3U0U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3U0U _cell.length_a 23.94 _cell.length_b 39.69 _cell.length_c 65.64 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3U0U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D MG MG . A MG 14 1_555 G O HOH . A HOH 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc2 D MG MG . A MG 14 1_555 G O HOH . A HOH 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc3 D MG MG . A MG 14 1_555 H O HOH . B HOH 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc4 D MG MG . A MG 14 1_555 H O HOH . B HOH 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc5 D MG MG . A MG 14 1_555 H O HOH . B HOH 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc6 D MG MG . A MG 14 1_555 H O HOH . B HOH 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc7 E MG MG . B MG 1 1_555 B OP1 DC 9 B DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc8 E MG MG . B MG 1 1_555 H O HOH . B HOH 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc9 E MG MG . B MG 1 1_555 H O HOH . B HOH 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc10 E MG MG . B MG 1 1_555 H O HOH . B HOH 88 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.205 ? metalc ? metalc11 H O HOH . B HOH 9 1_555 F MG MG . B MG 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc12 B OP2 DG 4 B DG 16 1_555 F MG MG . B MG 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc13 F MG MG . B MG 25 1_555 H O HOH . B HOH 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc14 F MG MG . B MG 25 1_555 H O HOH . B HOH 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 B N1 DG 12 B DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 B O6 DG 12 B DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 B N2 DG 12 B DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 2 A DG 2 1_555 B N3 DC 11 B DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 2 A DG 2 1_555 B O2 DC 11 B DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 2 A DG 2 1_555 B N4 DC 11 B DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DC 3 A DC 3 1_555 B N1 DG 10 B DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N4 DC 3 A DC 3 1_555 B O6 DG 10 B DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O2 DC 3 A DC 3 1_555 B N2 DG 10 B DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DG 4 A DG 4 1_555 B N3 DC 9 B DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N2 DG 4 A DG 4 1_555 B O2 DC 9 B DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O6 DG 4 A DG 4 1_555 B N4 DC 9 B DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N1 DA 5 A DA 5 1_555 B N3 DT 8 B DT 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N6 DA 5 A DA 5 1_555 B O4 DT 8 B DT 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N1 DA 6 A DA 6 1_555 B N3 DT 7 B DT 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N6 DA 6 A DA 6 1_555 B O4 DT 7 B DT 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N3 DT 7 A DT 7 1_555 B N1 DA 6 B DA 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O4 DT 7 A DT 7 1_555 B N6 DA 6 B DA 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N3 DT 8 A DT 8 1_555 B N1 DA 5 B DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A O4 DT 8 A DT 8 1_555 B N6 DA 5 B DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N3 DC 9 A DC 9 1_555 B N1 DG 4 B DG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N4 DC 9 A DC 9 1_555 B O6 DG 4 B DG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A O2 DC 9 A DC 9 1_555 B N2 DG 4 B DG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N1 DG 10 A DG 10 1_555 B N3 DC 3 B DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N2 DG 10 A DG 10 1_555 B O2 DC 3 B DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A O6 DG 10 A DG 10 1_555 B N4 DC 3 B DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N3 DC 11 A DC 11 1_555 B N1 DG 2 B DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N4 DC 11 A DC 11 1_555 B O6 DG 2 B DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A O2 DC 11 A DC 11 1_555 B N2 DG 2 B DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 A N1 DG 12 A DG 12 1_555 B N3 DC 1 B DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 A N2 DG 12 A DG 12 1_555 B O2 DC 1 B DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 A O6 DG 12 A DG 12 1_555 B N4 DC 1 B DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3U0U _atom_sites.fract_transf_matrix[1][1] 0.041771 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025195 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015235 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 D83 A 1 13 1 D83 883 . D 3 MG A 1 14 1 MG MG . E 3 MG B 1 1 1 MG MG . F 3 MG B 1 25 1 MG MG . G 4 HOH A 1 15 15 HOH HOH . G 4 HOH A 2 16 16 HOH HOH . G 4 HOH A 3 17 17 HOH HOH . G 4 HOH A 4 18 1 HOH HOH . G 4 HOH A 5 19 19 HOH HOH . G 4 HOH A 6 20 20 HOH HOH . G 4 HOH A 7 21 21 HOH HOH . G 4 HOH A 8 22 2 HOH HOH . G 4 HOH A 9 23 4 HOH HOH . G 4 HOH A 10 24 8 HOH HOH . G 4 HOH A 11 25 25 HOH HOH . G 4 HOH A 12 26 26 HOH HOH . G 4 HOH A 13 27 9 HOH HOH . G 4 HOH A 14 28 10 HOH HOH . G 4 HOH A 15 29 29 HOH HOH . G 4 HOH A 16 30 11 HOH HOH . G 4 HOH A 17 31 13 HOH HOH . G 4 HOH A 18 32 4 HOH HOH . G 4 HOH A 19 33 33 HOH HOH . G 4 HOH A 20 34 34 HOH HOH . G 4 HOH A 21 35 6 HOH HOH . G 4 HOH A 22 36 36 HOH HOH . G 4 HOH A 23 37 37 HOH HOH . G 4 HOH A 24 38 38 HOH HOH . G 4 HOH A 25 39 39 HOH HOH . G 4 HOH A 26 40 7 HOH HOH . G 4 HOH A 27 41 41 HOH HOH . G 4 HOH A 28 42 42 HOH HOH . G 4 HOH A 29 43 43 HOH HOH . G 4 HOH A 30 44 44 HOH HOH . G 4 HOH A 31 45 11 HOH HOH . G 4 HOH A 32 46 13 HOH HOH . G 4 HOH A 33 47 47 HOH HOH . G 4 HOH A 34 48 48 HOH HOH . G 4 HOH A 35 49 49 HOH HOH . G 4 HOH A 36 50 50 HOH HOH . G 4 HOH A 37 51 51 HOH HOH . G 4 HOH A 38 52 20 HOH HOH . G 4 HOH A 39 53 21 HOH HOH . G 4 HOH A 40 54 29 HOH HOH . G 4 HOH A 41 55 3 HOH HOH . G 4 HOH A 42 56 7 HOH HOH . G 4 HOH A 43 57 9 HOH HOH . G 4 HOH A 44 58 2 HOH HOH . G 4 HOH A 45 59 3 HOH HOH . G 4 HOH A 46 60 1 HOH HOH . G 4 HOH A 47 61 4 HOH HOH . G 4 HOH A 48 62 8 HOH HOH . G 4 HOH A 49 63 1 HOH HOH . G 4 HOH A 50 64 2 HOH HOH . G 4 HOH A 51 65 7 HOH HOH . G 4 HOH A 52 66 3 HOH HOH . G 4 HOH A 53 67 4 HOH HOH . G 4 HOH A 54 68 6 HOH HOH . G 4 HOH A 55 69 7 HOH HOH . G 4 HOH A 56 70 1 HOH HOH . G 4 HOH A 57 71 5 HOH HOH . G 4 HOH A 58 72 1 HOH HOH . G 4 HOH A 59 73 2 HOH HOH . G 4 HOH A 60 74 3 HOH HOH . G 4 HOH A 61 75 5 HOH HOH . G 4 HOH A 62 76 1 HOH HOH . G 4 HOH A 63 77 1 HOH HOH . G 4 HOH A 64 78 2 HOH HOH . G 4 HOH A 65 79 1 HOH HOH . H 4 HOH B 1 2 2 HOH HOH . H 4 HOH B 2 3 3 HOH HOH . H 4 HOH B 3 4 4 HOH HOH . H 4 HOH B 4 5 5 HOH HOH . H 4 HOH B 5 6 6 HOH HOH . H 4 HOH B 6 7 7 HOH HOH . H 4 HOH B 7 8 8 HOH HOH . H 4 HOH B 8 9 9 HOH HOH . H 4 HOH B 9 10 10 HOH HOH . H 4 HOH B 10 11 11 HOH HOH . H 4 HOH B 11 12 12 HOH HOH . H 4 HOH B 12 26 14 HOH HOH . H 4 HOH B 13 27 27 HOH HOH . H 4 HOH B 14 28 28 HOH HOH . H 4 HOH B 15 29 22 HOH HOH . H 4 HOH B 16 30 30 HOH HOH . H 4 HOH B 17 31 31 HOH HOH . H 4 HOH B 18 32 32 HOH HOH . H 4 HOH B 19 33 23 HOH HOH . H 4 HOH B 20 34 1 HOH HOH . H 4 HOH B 21 35 3 HOH HOH . H 4 HOH B 22 36 36 HOH HOH . H 4 HOH B 23 37 1 HOH HOH . H 4 HOH B 24 38 38 HOH HOH . H 4 HOH B 25 39 39 HOH HOH . H 4 HOH B 26 40 2 HOH HOH . H 4 HOH B 27 41 5 HOH HOH . H 4 HOH B 28 42 12 HOH HOH . H 4 HOH B 29 43 14 HOH HOH . H 4 HOH B 30 44 15 HOH HOH . H 4 HOH B 31 45 45 HOH HOH . H 4 HOH B 32 46 46 HOH HOH . H 4 HOH B 33 47 17 HOH HOH . H 4 HOH B 34 48 48 HOH HOH . H 4 HOH B 35 49 49 HOH HOH . H 4 HOH B 36 50 18 HOH HOH . H 4 HOH B 37 51 51 HOH HOH . H 4 HOH B 38 52 52 HOH HOH . H 4 HOH B 39 53 53 HOH HOH . H 4 HOH B 40 54 54 HOH HOH . H 4 HOH B 41 55 19 HOH HOH . H 4 HOH B 42 56 22 HOH HOH . H 4 HOH B 43 57 23 HOH HOH . H 4 HOH B 44 58 24 HOH HOH . H 4 HOH B 45 59 28 HOH HOH . H 4 HOH B 46 60 32 HOH HOH . H 4 HOH B 47 61 1 HOH HOH . H 4 HOH B 48 62 2 HOH HOH . H 4 HOH B 49 63 5 HOH HOH . H 4 HOH B 50 64 4 HOH HOH . H 4 HOH B 51 65 5 HOH HOH . H 4 HOH B 52 66 1 HOH HOH . H 4 HOH B 53 67 2 HOH HOH . H 4 HOH B 54 68 3 HOH HOH . H 4 HOH B 55 69 5 HOH HOH . H 4 HOH B 56 70 6 HOH HOH . H 4 HOH B 57 71 2 HOH HOH . H 4 HOH B 58 72 3 HOH HOH . H 4 HOH B 59 73 4 HOH HOH . H 4 HOH B 60 74 5 HOH HOH . H 4 HOH B 61 75 6 HOH HOH . H 4 HOH B 62 76 4 HOH HOH . H 4 HOH B 63 77 5 HOH HOH . H 4 HOH B 64 78 6 HOH HOH . H 4 HOH B 65 79 1 HOH HOH . H 4 HOH B 66 80 2 HOH HOH . H 4 HOH B 67 81 5 HOH HOH . H 4 HOH B 68 82 2 HOH HOH . H 4 HOH B 69 83 3 HOH HOH . H 4 HOH B 70 84 4 HOH HOH . H 4 HOH B 71 85 2 HOH HOH . H 4 HOH B 72 86 1 HOH HOH . H 4 HOH B 73 87 3 HOH HOH . H 4 HOH B 74 88 5 HOH HOH . H 4 HOH B 75 89 6 HOH HOH . H 4 HOH B 76 90 10 HOH HOH . H 4 HOH B 77 91 12 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 13.67 _atom_site.Cartn_y 28.349 _atom_site.Cartn_z 20.056 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 10.2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 14 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #