data_3U15
#
_model_server_result.job_id            qswiCqyJJ8Hkp87FwGv5DA 
_model_server_result.datetime_utc      '2024-11-24 21:54:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3u15 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1}' 
#
_entry.id    3U15 
#
_exptl.entry_id    3U15 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              401.794 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (5Z)-5-[(6-chloro-7-methyl-1H-indol-3-yl)methylidene]-3-(3,4-difluorobenzyl)imidazolidine-2,4-dione 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3U15 
_cell.length_a            73.031 
_cell.length_b            73.031 
_cell.length_c            68.774 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3U15 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,K,L 1 1 
C,D,H,I,J,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
_chem_comp.formula           'C20 H14 Cl F2 N3 O2' 
_chem_comp.formula_weight    401.794 
_chem_comp.id                03M 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (5Z)-5-[(6-chloro-7-methyl-1H-indol-3-yl)methylidene]-3-(3,4-difluorobenzyl)imidazolidine-2,4-dione 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C4 C1 03M sing 1 n y 
C4 H4 03M sing 2 n n 
C6 C7 03M doub 3 n y 
C6 N5 03M sing 4 n y 
C6 H6 03M sing 5 n n 
C7 C8 03M sing 6 n y 
C8 C4 03M doub 7 n y 
C8 C9 03M sing 8 n y 
C10 C7 03M sing 9 n n 
C10 H10 03M sing 10 n n 
N12 C11 03M sing 11 n n 
C13 N12 03M sing 12 n n 
C15 O17 03M doub 13 n n 
C15 C11 03M sing 14 n n 
C20 C21 03M sing 15 n y 
C20 H20 03M sing 16 n n 
C21 H21 03M sing 17 n n 
C22 C21 03M doub 18 n y 
C22 F26 03M sing 19 n n 
C24 C19 03M sing 20 n y 
C24 C23 03M doub 21 n y 
C24 H24 03M sing 22 n n 
C1 C2 03M doub 23 n y 
C1 H1 03M sing 24 n n 
C2 CL 03M sing 25 n n 
C3 C2 03M sing 26 n y 
C3 C27 03M sing 27 n n 
N5 C9 03M sing 28 n y 
N5 HN5 03M sing 29 n n 
C9 C3 03M doub 30 n y 
C11 C10 03M doub 31 z n 
N14 C13 03M sing 32 n n 
N14 C15 03M sing 33 n n 
O16 C13 03M doub 34 n n 
C18 N14 03M sing 35 n n 
C18 C19 03M sing 36 n n 
C18 H18 03M sing 37 n n 
C18 H18A 03M sing 38 n n 
C19 C20 03M doub 39 n y 
C23 C22 03M sing 40 n y 
F25 C23 03M sing 41 n n 
C27 H27 03M sing 42 n n 
C27 H27A 03M sing 43 n n 
C27 H27B 03M sing 44 n n 
N12 H14 03M sing 45 n n 
#
_atom_sites.entry_id                     3U15 
_atom_sites.fract_transf_matrix[1][1]    0.013693 
_atom_sites.fract_transf_matrix[1][2]    0.007906 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015811 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01454 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 03M A 1 1 1 03M 03M . 
F 3 SO4 A 1 112 1 SO4 SO4 . 
G 2 03M B 1 1 1 03M 03M . 
H 2 03M C 1 1 1 03M 03M . 
I 2 03M D 1 1 1 03M 03M . 
J 3 SO4 D 1 2 2 SO4 SO4 . 
K 4 HOH A 1 2 2 HOH HOH . 
K 4 HOH A 2 3 3 HOH HOH . 
K 4 HOH A 3 4 4 HOH HOH . 
K 4 HOH A 4 7 7 HOH HOH . 
K 4 HOH A 5 9 9 HOH HOH . 
K 4 HOH A 6 113 16 HOH HOH . 
K 4 HOH A 7 114 114 HOH HOH . 
K 4 HOH A 8 115 115 HOH HOH . 
K 4 HOH A 9 116 17 HOH HOH . 
K 4 HOH A 10 117 18 HOH HOH . 
K 4 HOH A 11 118 19 HOH HOH . 
K 4 HOH A 12 119 119 HOH HOH . 
K 4 HOH A 13 120 120 HOH HOH . 
K 4 HOH A 14 121 30 HOH HOH . 
K 4 HOH A 15 122 122 HOH HOH . 
K 4 HOH A 16 123 32 HOH HOH . 
K 4 HOH A 17 124 33 HOH HOH . 
K 4 HOH A 18 125 34 HOH HOH . 
K 4 HOH A 19 126 38 HOH HOH . 
K 4 HOH A 20 127 127 HOH HOH . 
K 4 HOH A 21 128 39 HOH HOH . 
K 4 HOH A 22 129 42 HOH HOH . 
K 4 HOH A 23 130 44 HOH HOH . 
K 4 HOH A 24 131 131 HOH HOH . 
K 4 HOH A 25 132 132 HOH HOH . 
K 4 HOH A 26 133 133 HOH HOH . 
K 4 HOH A 27 134 134 HOH HOH . 
K 4 HOH A 28 135 135 HOH HOH . 
K 4 HOH A 29 136 45 HOH HOH . 
K 4 HOH A 30 137 46 HOH HOH . 
K 4 HOH A 31 138 47 HOH HOH . 
K 4 HOH A 32 139 48 HOH HOH . 
K 4 HOH A 33 140 49 HOH HOH . 
K 4 HOH A 34 141 50 HOH HOH . 
K 4 HOH A 35 142 51 HOH HOH . 
K 4 HOH A 36 143 52 HOH HOH . 
K 4 HOH A 37 144 54 HOH HOH . 
K 4 HOH A 38 145 65 HOH HOH . 
K 4 HOH A 39 146 66 HOH HOH . 
K 4 HOH A 40 147 67 HOH HOH . 
K 4 HOH A 41 148 73 HOH HOH . 
K 4 HOH A 42 149 111 HOH HOH . 
K 4 HOH A 43 150 112 HOH HOH . 
L 4 HOH B 1 112 20 HOH HOH . 
L 4 HOH B 2 113 113 HOH HOH . 
L 4 HOH B 3 114 21 HOH HOH . 
L 4 HOH B 4 115 22 HOH HOH . 
L 4 HOH B 5 116 23 HOH HOH . 
L 4 HOH B 6 117 31 HOH HOH . 
L 4 HOH B 7 118 118 HOH HOH . 
L 4 HOH B 8 119 40 HOH HOH . 
L 4 HOH B 9 120 53 HOH HOH . 
L 4 HOH B 10 121 121 HOH HOH . 
L 4 HOH B 11 122 55 HOH HOH . 
L 4 HOH B 12 123 123 HOH HOH . 
L 4 HOH B 13 124 56 HOH HOH . 
L 4 HOH B 14 125 57 HOH HOH . 
L 4 HOH B 15 126 126 HOH HOH . 
L 4 HOH B 16 127 58 HOH HOH . 
L 4 HOH B 17 128 68 HOH HOH . 
L 4 HOH B 18 129 69 HOH HOH . 
L 4 HOH B 19 130 70 HOH HOH . 
L 4 HOH B 20 131 71 HOH HOH . 
L 4 HOH B 21 132 72 HOH HOH . 
L 4 HOH B 22 133 74 HOH HOH . 
L 4 HOH B 23 134 75 HOH HOH . 
L 4 HOH B 24 135 76 HOH HOH . 
L 4 HOH B 25 136 136 HOH HOH . 
L 4 HOH B 26 137 137 HOH HOH . 
L 4 HOH B 27 138 138 HOH HOH . 
L 4 HOH B 28 139 139 HOH HOH . 
L 4 HOH B 29 140 140 HOH HOH . 
L 4 HOH B 30 141 141 HOH HOH . 
L 4 HOH B 31 142 78 HOH HOH . 
L 4 HOH B 32 143 79 HOH HOH . 
L 4 HOH B 33 144 110 HOH HOH . 
L 4 HOH B 34 147 147 HOH HOH . 
M 4 HOH C 1 5 5 HOH HOH . 
M 4 HOH C 2 6 6 HOH HOH . 
M 4 HOH C 3 8 8 HOH HOH . 
M 4 HOH C 4 10 10 HOH HOH . 
M 4 HOH C 5 112 1 HOH HOH . 
M 4 HOH C 6 113 13 HOH HOH . 
M 4 HOH C 7 114 14 HOH HOH . 
M 4 HOH C 8 115 15 HOH HOH . 
M 4 HOH C 9 116 116 HOH HOH . 
M 4 HOH C 10 117 117 HOH HOH . 
M 4 HOH C 11 118 35 HOH HOH . 
M 4 HOH C 12 119 41 HOH HOH . 
M 4 HOH C 13 120 43 HOH HOH . 
M 4 HOH C 14 121 61 HOH HOH . 
M 4 HOH C 15 122 62 HOH HOH . 
M 4 HOH C 16 123 63 HOH HOH . 
M 4 HOH C 17 124 124 HOH HOH . 
M 4 HOH C 18 125 125 HOH HOH . 
M 4 HOH C 19 126 64 HOH HOH . 
M 4 HOH C 20 127 80 HOH HOH . 
M 4 HOH C 21 128 81 HOH HOH . 
M 4 HOH C 22 129 82 HOH HOH . 
M 4 HOH C 23 130 83 HOH HOH . 
M 4 HOH C 24 131 84 HOH HOH . 
M 4 HOH C 25 132 85 HOH HOH . 
M 4 HOH C 26 133 86 HOH HOH . 
M 4 HOH C 27 134 87 HOH HOH . 
M 4 HOH C 28 135 88 HOH HOH . 
M 4 HOH C 29 136 90 HOH HOH . 
M 4 HOH C 30 137 92 HOH HOH . 
M 4 HOH C 31 138 93 HOH HOH . 
M 4 HOH C 32 139 94 HOH HOH . 
M 4 HOH C 33 140 95 HOH HOH . 
M 4 HOH C 34 141 96 HOH HOH . 
M 4 HOH C 35 142 142 HOH HOH . 
M 4 HOH C 36 143 143 HOH HOH . 
M 4 HOH C 37 144 97 HOH HOH . 
N 4 HOH D 1 11 11 HOH HOH . 
N 4 HOH D 2 112 12 HOH HOH . 
N 4 HOH D 3 113 24 HOH HOH . 
N 4 HOH D 4 114 25 HOH HOH . 
N 4 HOH D 5 115 26 HOH HOH . 
N 4 HOH D 6 116 27 HOH HOH . 
N 4 HOH D 7 117 28 HOH HOH . 
N 4 HOH D 8 118 29 HOH HOH . 
N 4 HOH D 9 119 36 HOH HOH . 
N 4 HOH D 10 120 37 HOH HOH . 
N 4 HOH D 11 121 59 HOH HOH . 
N 4 HOH D 12 122 60 HOH HOH . 
N 4 HOH D 13 123 77 HOH HOH . 
N 4 HOH D 14 124 89 HOH HOH . 
N 4 HOH D 15 125 91 HOH HOH . 
N 4 HOH D 16 126 98 HOH HOH . 
N 4 HOH D 17 127 99 HOH HOH . 
N 4 HOH D 18 128 128 HOH HOH . 
N 4 HOH D 19 129 129 HOH HOH . 
N 4 HOH D 20 130 130 HOH HOH . 
N 4 HOH D 21 131 100 HOH HOH . 
N 4 HOH D 22 132 101 HOH HOH . 
N 4 HOH D 23 133 102 HOH HOH . 
N 4 HOH D 24 134 103 HOH HOH . 
N 4 HOH D 25 135 104 HOH HOH . 
N 4 HOH D 26 136 105 HOH HOH . 
N 4 HOH D 27 137 106 HOH HOH . 
N 4 HOH D 28 138 107 HOH HOH . 
N 4 HOH D 29 139 108 HOH HOH . 
N 4 HOH D 30 140 109 HOH HOH . 
N 4 HOH D 31 144 144 HOH HOH . 
N 4 HOH D 32 145 145 HOH HOH . 
N 4 HOH D 33 146 146 HOH HOH . 
N 4 HOH D 34 148 148 HOH HOH . 
N 4 HOH D 35 149 149 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 03M . . . G 2 -11.91 -37.34 3.423 1 19.58 ? C4 03M 1 B 1 
HETATM 2 C C6 03M . . . G 2 -8.367 -37.431 4.495 1 22.99 ? C6 03M 1 B 1 
HETATM 3 C C7 03M . . . G 2 -9.586 -36.817 4.45 1 21.39 ? C7 03M 1 B 1 
HETATM 4 C C8 03M . . . G 2 -10.571 -37.555 3.761 1 22.61 ? C8 03M 1 B 1 
HETATM 5 C C10 03M . . . G 2 -9.839 -35.501 5.074 1 21.98 ? C10 03M 1 B 1 
HETATM 6 N N12 03M . . . G 2 -7.697 -35.07 6.397 1 19.45 ? N12 03M 1 B 1 
HETATM 7 C C13 03M . . . G 2 -7.364 -33.991 7.165 1 24.64 ? C13 03M 1 B 1 
HETATM 8 C C15 03M . . . G 2 -9.329 -33.45 6.583 1 23.04 ? C15 03M 1 B 1 
HETATM 9 C C20 03M . . . G 2 -8.862 -29.432 7.371 1 27.56 ? C20 03M 1 B 1 
HETATM 10 C C21 03M . . . G 2 -8.538 -28.22 6.778 1 28.02 ? C21 03M 1 B 1 
HETATM 11 C C22 03M . . . G 2 -7.314 -28.11 6.141 1 27.47 ? C22 03M 1 B 1 
HETATM 12 C C24 03M . . . G 2 -6.692 -30.369 6.726 1 30.2 ? C24 03M 1 B 1 
HETATM 13 C C1 03M . . . G 2 -12.608 -38.355 2.706 1 24.94 ? C1 03M 1 B 1 
HETATM 14 C C2 03M . . . G 2 -11.96 -39.524 2.292 1 20.26 ? C2 03M 1 B 1 
HETATM 15 C C3 03M . . . G 2 -10.621 -39.691 2.692 1 22.78 ? C3 03M 1 B 1 
HETATM 16 N N5 03M . . . G 2 -8.625 -38.608 3.847 1 21.82 ? N5 03M 1 B 1 
HETATM 17 C C9 03M . . . G 2 -9.936 -38.71 3.421 1 20.96 ? C9 03M 1 B 1 
HETATM 18 C C11 03M . . . G 2 -8.941 -34.72 5.98 1 21.77 ? C11 03M 1 B 1 
HETATM 19 N N14 03M . . . G 2 -8.309 -32.998 7.305 1 24.08 ? N14 03M 1 B 1 
HETATM 20 O O16 03M . . . G 2 -6.201 -33.999 7.761 1 19.83 ? O16 03M 1 B 1 
HETATM 21 O O17 03M . . . G 2 -10.475 -32.841 6.317 1 25.2 ? O17 03M 1 B 1 
HETATM 22 C C18 03M . . . G 2 -8.282 -31.774 8.069 1 27.43 ? C18 03M 1 B 1 
HETATM 23 C C19 03M . . . G 2 -7.939 -30.498 7.352 1 32.26 ? C19 03M 1 B 1 
HETATM 24 C C23 03M . . . G 2 -6.399 -29.164 6.142 1 27.92 ? C23 03M 1 B 1 
HETATM 25 F F25 03M . . . G 2 -5.227 -28.989 5.531 1 30.94 ? F25 03M 1 B 1 
HETATM 26 F F26 03M . . . G 2 -6.951 -26.973 5.536 1 26.08 ? F26 03M 1 B 1 
HETATM 27 C C27 03M . . . G 2 -9.9 -40.93 2.301 1 26.78 ? C27 03M 1 B 1 
HETATM 28 CL CL 03M . . . G 2 -12.778 -40.791 1.338 1 27.63 ? CL 03M 1 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           222 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           28 
#