data_3U1P # _model_server_result.job_id AY35fQ-ZrQt-6ZWW1bxzZw _model_server_result.datetime_utc '2024-10-19 15:32:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3u1p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 3U1P # _exptl.entry_id 3U1P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3U1P _cell.length_a 119.044 _cell.length_b 121.223 _cell.length_c 122.884 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3U1P _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 A,B,C,D,E,F 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 232 A GLY 353 1_555 A N CSO 233 A CSO 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale2 A C CSO 233 A CSO 354 1_555 A N LEU 234 A LEU 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 B C GLY 232 B GLY 353 1_555 B N CSO 233 B CSO 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale4 B C CSO 233 B CSO 354 1_555 B N LEU 234 B LEU 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 238 n n C1 C2 PEG sing 239 n n C1 H11 PEG sing 240 n n C1 H12 PEG sing 241 n n O1 HO1 PEG sing 242 n n C2 O2 PEG sing 243 n n C2 H21 PEG sing 244 n n C2 H22 PEG sing 245 n n O2 C3 PEG sing 246 n n C3 C4 PEG sing 247 n n C3 H31 PEG sing 248 n n C3 H32 PEG sing 249 n n C4 O4 PEG sing 250 n n C4 H41 PEG sing 251 n n C4 H42 PEG sing 252 n n O4 HO4 PEG sing 253 n n # _atom_sites.entry_id 3U1P _atom_sites.fract_transf_matrix[1][1] 0.0084 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008249 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008138 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG A 1 501 2 PEG PEG . D 2 PEG B 1 501 1 PEG PEG . E 3 HOH A 1 601 1 HOH HOH . E 3 HOH A 2 602 2 HOH HOH . E 3 HOH A 3 603 5 HOH HOH . E 3 HOH A 4 604 14 HOH HOH . E 3 HOH A 5 605 15 HOH HOH . E 3 HOH A 6 606 17 HOH HOH . E 3 HOH A 7 607 18 HOH HOH . E 3 HOH A 8 608 26 HOH HOH . E 3 HOH A 9 609 28 HOH HOH . E 3 HOH A 10 610 31 HOH HOH . E 3 HOH A 11 611 32 HOH HOH . E 3 HOH A 12 612 33 HOH HOH . E 3 HOH A 13 613 41 HOH HOH . E 3 HOH A 14 614 43 HOH HOH . E 3 HOH A 15 615 47 HOH HOH . E 3 HOH A 16 616 65 HOH HOH . E 3 HOH A 17 617 68 HOH HOH . E 3 HOH A 18 618 96 HOH HOH . E 3 HOH A 19 619 111 HOH HOH . E 3 HOH A 20 620 113 HOH HOH . E 3 HOH A 21 621 125 HOH HOH . E 3 HOH A 22 622 131 HOH HOH . E 3 HOH A 23 623 132 HOH HOH . E 3 HOH A 24 624 145 HOH HOH . E 3 HOH A 25 625 151 HOH HOH . E 3 HOH A 26 626 167 HOH HOH . E 3 HOH A 27 627 207 HOH HOH . E 3 HOH A 28 628 221 HOH HOH . E 3 HOH A 29 629 222 HOH HOH . E 3 HOH A 30 630 223 HOH HOH . E 3 HOH A 31 631 224 HOH HOH . E 3 HOH A 32 632 225 HOH HOH . E 3 HOH A 33 633 226 HOH HOH . E 3 HOH A 34 634 228 HOH HOH . E 3 HOH A 35 635 229 HOH HOH . E 3 HOH A 36 636 232 HOH HOH . E 3 HOH A 37 637 233 HOH HOH . E 3 HOH A 38 638 235 HOH HOH . E 3 HOH A 39 639 239 HOH HOH . E 3 HOH A 40 640 240 HOH HOH . E 3 HOH A 41 641 246 HOH HOH . E 3 HOH A 42 642 252 HOH HOH . E 3 HOH A 43 643 253 HOH HOH . E 3 HOH A 44 644 254 HOH HOH . E 3 HOH A 45 645 255 HOH HOH . E 3 HOH A 46 646 258 HOH HOH . E 3 HOH A 47 647 259 HOH HOH . E 3 HOH A 48 648 260 HOH HOH . E 3 HOH A 49 649 261 HOH HOH . E 3 HOH A 50 650 262 HOH HOH . E 3 HOH A 51 651 263 HOH HOH . E 3 HOH A 52 652 269 HOH HOH . E 3 HOH A 53 653 273 HOH HOH . E 3 HOH A 54 654 274 HOH HOH . E 3 HOH A 55 655 277 HOH HOH . E 3 HOH A 56 656 279 HOH HOH . E 3 HOH A 57 657 282 HOH HOH . E 3 HOH A 58 658 3 HOH HOH . E 3 HOH A 59 659 5 HOH HOH . E 3 HOH A 60 660 12 HOH HOH . E 3 HOH A 61 661 17 HOH HOH . E 3 HOH A 62 662 18 HOH HOH . E 3 HOH A 63 663 29 HOH HOH . E 3 HOH A 64 664 71 HOH HOH . E 3 HOH A 65 665 81 HOH HOH . E 3 HOH A 66 666 110 HOH HOH . E 3 HOH A 67 667 178 HOH HOH . E 3 HOH A 68 668 5 HOH HOH . E 3 HOH A 69 669 10 HOH HOH . E 3 HOH A 70 670 42 HOH HOH . E 3 HOH A 71 671 81 HOH HOH . E 3 HOH A 72 672 10 HOH HOH . E 3 HOH A 73 673 145 HOH HOH . E 3 HOH A 74 674 25 HOH HOH . E 3 HOH A 75 675 71 HOH HOH . E 3 HOH A 76 676 150 HOH HOH . F 3 HOH B 1 601 3 HOH HOH . F 3 HOH B 2 602 4 HOH HOH . F 3 HOH B 3 603 6 HOH HOH . F 3 HOH B 4 604 7 HOH HOH . F 3 HOH B 5 605 9 HOH HOH . F 3 HOH B 6 606 12 HOH HOH . F 3 HOH B 7 607 13 HOH HOH . F 3 HOH B 8 608 16 HOH HOH . F 3 HOH B 9 609 21 HOH HOH . F 3 HOH B 10 610 23 HOH HOH . F 3 HOH B 11 611 30 HOH HOH . F 3 HOH B 12 612 36 HOH HOH . F 3 HOH B 13 613 42 HOH HOH . F 3 HOH B 14 614 48 HOH HOH . F 3 HOH B 15 615 69 HOH HOH . F 3 HOH B 16 616 75 HOH HOH . F 3 HOH B 17 617 77 HOH HOH . F 3 HOH B 18 618 90 HOH HOH . F 3 HOH B 19 619 101 HOH HOH . F 3 HOH B 20 620 103 HOH HOH . F 3 HOH B 21 621 107 HOH HOH . F 3 HOH B 22 622 119 HOH HOH . F 3 HOH B 23 623 123 HOH HOH . F 3 HOH B 24 624 140 HOH HOH . F 3 HOH B 25 625 191 HOH HOH . F 3 HOH B 26 626 192 HOH HOH . F 3 HOH B 27 627 209 HOH HOH . F 3 HOH B 28 628 211 HOH HOH . F 3 HOH B 29 629 215 HOH HOH . F 3 HOH B 30 630 218 HOH HOH . F 3 HOH B 31 631 219 HOH HOH . F 3 HOH B 32 632 220 HOH HOH . F 3 HOH B 33 633 227 HOH HOH . F 3 HOH B 34 634 230 HOH HOH . F 3 HOH B 35 635 231 HOH HOH . F 3 HOH B 36 636 236 HOH HOH . F 3 HOH B 37 637 238 HOH HOH . F 3 HOH B 38 638 241 HOH HOH . F 3 HOH B 39 639 242 HOH HOH . F 3 HOH B 40 640 243 HOH HOH . F 3 HOH B 41 641 245 HOH HOH . F 3 HOH B 42 642 249 HOH HOH . F 3 HOH B 43 643 250 HOH HOH . F 3 HOH B 44 644 256 HOH HOH . F 3 HOH B 45 645 257 HOH HOH . F 3 HOH B 46 646 264 HOH HOH . F 3 HOH B 47 647 265 HOH HOH . F 3 HOH B 48 648 266 HOH HOH . F 3 HOH B 49 649 267 HOH HOH . F 3 HOH B 50 650 268 HOH HOH . F 3 HOH B 51 651 275 HOH HOH . F 3 HOH B 52 652 276 HOH HOH . F 3 HOH B 53 653 2 HOH HOH . F 3 HOH B 54 654 21 HOH HOH . F 3 HOH B 55 655 25 HOH HOH . F 3 HOH B 56 656 40 HOH HOH . F 3 HOH B 57 657 64 HOH HOH . F 3 HOH B 58 658 65 HOH HOH . F 3 HOH B 59 659 67 HOH HOH . F 3 HOH B 60 660 78 HOH HOH . F 3 HOH B 61 661 91 HOH HOH . F 3 HOH B 62 662 111 HOH HOH . F 3 HOH B 63 663 112 HOH HOH . F 3 HOH B 64 664 116 HOH HOH . F 3 HOH B 65 665 120 HOH HOH . F 3 HOH B 66 666 128 HOH HOH . F 3 HOH B 67 667 152 HOH HOH . F 3 HOH B 68 668 11 HOH HOH . F 3 HOH B 69 669 45 HOH HOH . F 3 HOH B 70 670 63 HOH HOH . F 3 HOH B 71 671 82 HOH HOH . F 3 HOH B 72 672 99 HOH HOH . F 3 HOH B 73 673 112 HOH HOH . F 3 HOH B 74 674 147 HOH HOH . F 3 HOH B 75 675 21 HOH HOH . F 3 HOH B 76 676 76 HOH HOH . F 3 HOH B 77 677 72 HOH HOH . F 3 HOH B 78 678 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 2 13.991 -42.111 37.696 1 66.4 ? C1 PEG 501 B 1 HETATM 2 O O1 PEG . . . D 2 13.223 -41.677 38.831 1 65.25 ? O1 PEG 501 B 1 HETATM 3 C C2 PEG . . . D 2 14.383 -40.91 36.832 1 65.16 ? C2 PEG 501 B 1 HETATM 4 O O2 PEG . . . D 2 13.643 -40.884 35.608 1 63.8 ? O2 PEG 501 B 1 HETATM 5 C C3 PEG . . . D 2 13.116 -39.581 35.354 1 63.52 ? C3 PEG 501 B 1 HETATM 6 C C4 PEG . . . D 2 12.515 -39.518 33.949 1 62.79 ? C4 PEG 501 B 1 HETATM 7 O O4 PEG . . . D 2 11.686 -38.351 33.818 1 60.98 ? O4 PEG 501 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #