data_3U23
#
_model_server_result.job_id            H5SRNHa3ZjX2sjZX4JNGow 
_model_server_result.datetime_utc      '2024-12-26 15:09:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3u23 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1}' 
#
_entry.id    3U23 
#
_exptl.entry_id    3U23 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.56 
_cell.angle_gamma         90 
_cell.entry_id            3U23 
_cell.length_a            53.13 
_cell.length_b            32.04 
_cell.length_c            39.18 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3U23 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            B 
_struct_conn.ptnr1_label_atom_id            C 
_struct_conn.ptnr1_label_comp_id            SER 
_struct_conn.ptnr1_label_seq_id             16 
_struct_conn.ptnr1_auth_asym_id             B 
_struct_conn.ptnr1_auth_comp_id             SER 
_struct_conn.ptnr1_auth_seq_id              467 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            N 
_struct_conn.ptnr2_label_comp_id            NH2 
_struct_conn.ptnr2_label_seq_id             17 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             NH2 
_struct_conn.ptnr2_auth_seq_id              468 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.265 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3U23 
_atom_sites.fract_transf_matrix[1][1]    0.018822 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000842 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.031211 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025549 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 EDO A 1 1 1 EDO EDO . 
D 4 HOH A 1 2 2 HOH HOH . 
D 4 HOH A 2 3 3 HOH HOH . 
D 4 HOH A 3 4 4 HOH HOH . 
D 4 HOH A 4 5 5 HOH HOH . 
D 4 HOH A 5 6 6 HOH HOH . 
D 4 HOH A 6 7 7 HOH HOH . 
D 4 HOH A 7 9 9 HOH HOH . 
D 4 HOH A 8 10 10 HOH HOH . 
D 4 HOH A 9 12 12 HOH HOH . 
D 4 HOH A 10 13 13 HOH HOH . 
D 4 HOH A 11 14 14 HOH HOH . 
D 4 HOH A 12 15 15 HOH HOH . 
D 4 HOH A 13 16 16 HOH HOH . 
D 4 HOH A 14 17 17 HOH HOH . 
D 4 HOH A 15 18 18 HOH HOH . 
D 4 HOH A 16 22 22 HOH HOH . 
D 4 HOH A 17 24 24 HOH HOH . 
D 4 HOH A 18 25 25 HOH HOH . 
D 4 HOH A 19 26 26 HOH HOH . 
D 4 HOH A 20 27 27 HOH HOH . 
D 4 HOH A 21 32 32 HOH HOH . 
D 4 HOH A 22 34 34 HOH HOH . 
D 4 HOH A 23 35 35 HOH HOH . 
D 4 HOH A 24 37 37 HOH HOH . 
D 4 HOH A 25 39 39 HOH HOH . 
D 4 HOH A 26 40 40 HOH HOH . 
D 4 HOH A 27 41 41 HOH HOH . 
D 4 HOH A 28 43 43 HOH HOH . 
D 4 HOH A 29 46 46 HOH HOH . 
D 4 HOH A 30 47 47 HOH HOH . 
D 4 HOH A 31 48 48 HOH HOH . 
D 4 HOH A 32 49 49 HOH HOH . 
D 4 HOH A 33 53 53 HOH HOH . 
D 4 HOH A 34 54 54 HOH HOH . 
D 4 HOH A 35 55 55 HOH HOH . 
D 4 HOH A 36 57 57 HOH HOH . 
D 4 HOH A 37 58 58 HOH HOH . 
D 4 HOH A 38 59 59 HOH HOH . 
D 4 HOH A 39 60 60 HOH HOH . 
D 4 HOH A 40 61 61 HOH HOH . 
D 4 HOH A 41 62 62 HOH HOH . 
D 4 HOH A 42 63 63 HOH HOH . 
D 4 HOH A 43 65 65 HOH HOH . 
D 4 HOH A 44 66 66 HOH HOH . 
D 4 HOH A 45 70 70 HOH HOH . 
D 4 HOH A 46 72 72 HOH HOH . 
D 4 HOH A 47 74 74 HOH HOH . 
D 4 HOH A 48 75 75 HOH HOH . 
D 4 HOH A 49 76 76 HOH HOH . 
D 4 HOH A 50 77 77 HOH HOH . 
D 4 HOH A 51 80 80 HOH HOH . 
D 4 HOH A 52 83 83 HOH HOH . 
D 4 HOH A 53 84 84 HOH HOH . 
D 4 HOH A 54 85 85 HOH HOH . 
D 4 HOH A 55 86 86 HOH HOH . 
D 4 HOH A 56 87 87 HOH HOH . 
D 4 HOH A 57 88 88 HOH HOH . 
D 4 HOH A 58 89 89 HOH HOH . 
D 4 HOH A 59 90 90 HOH HOH . 
D 4 HOH A 60 91 91 HOH HOH . 
D 4 HOH A 61 92 92 HOH HOH . 
D 4 HOH A 62 93 93 HOH HOH . 
D 4 HOH A 63 94 94 HOH HOH . 
D 4 HOH A 64 96 96 HOH HOH . 
D 4 HOH A 65 97 97 HOH HOH . 
D 4 HOH A 66 98 98 HOH HOH . 
D 4 HOH A 67 99 99 HOH HOH . 
D 4 HOH A 68 100 100 HOH HOH . 
E 4 HOH B 1 1 1 HOH HOH . 
E 4 HOH B 2 8 8 HOH HOH . 
E 4 HOH B 3 11 11 HOH HOH . 
E 4 HOH B 4 19 19 HOH HOH . 
E 4 HOH B 5 21 21 HOH HOH . 
E 4 HOH B 6 23 23 HOH HOH . 
E 4 HOH B 7 28 28 HOH HOH . 
E 4 HOH B 8 30 30 HOH HOH . 
E 4 HOH B 9 36 36 HOH HOH . 
E 4 HOH B 10 38 38 HOH HOH . 
E 4 HOH B 11 42 42 HOH HOH . 
E 4 HOH B 12 45 45 HOH HOH . 
E 4 HOH B 13 51 51 HOH HOH . 
E 4 HOH B 14 68 68 HOH HOH . 
E 4 HOH B 15 69 69 HOH HOH . 
E 4 HOH B 16 71 71 HOH HOH . 
E 4 HOH B 17 78 78 HOH HOH . 
E 4 HOH B 18 95 95 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 3.504 -0.542 13.928 1 42.88 ? C1 EDO 1 A 1 
HETATM 2 O O1 EDO . . . C 3 3.927 0.791 14.107 1 45.34 ? O1 EDO 1 A 1 
HETATM 3 C C2 EDO . . . C 3 2.053 -0.453 14.312 1 44.08 ? C2 EDO 1 A 1 
HETATM 4 O O2 EDO . . . C 3 1.309 0.284 13.347 1 39.66 ? O2 EDO 1 A 1 
#
_model_server_stats.io_time_ms              47 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#