data_3U2T # _model_server_result.job_id L1mUZB7RKYDzC5yI-P4RIg _model_server_result.datetime_utc '2024-11-16 08:40:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3u2t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":264}' # _entry.id 3U2T # _exptl.entry_id 3U2T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3U2T _cell.length_a 58.35 _cell.length_b 101.06 _cell.length_c 47.83 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3U2T _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 58.35 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 124 A ASP 102 1_555 B MN MN . A MN 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc2 A OD1 ASP 126 A ASP 104 1_555 B MN MN . A MN 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc3 A OD2 ASP 126 A ASP 104 1_555 B MN MN . A MN 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc4 A NE2 HIS 234 A HIS 212 1_555 B MN MN . A MN 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc5 B MN MN . A MN 263 1_555 G O HOH . A HOH 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc6 B MN MN . A MN 263 1_555 G O HOH . A HOH 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3U2T _atom_sites.fract_transf_matrix[1][1] 0.017138 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009895 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020907 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 263 1 MN MN . C 3 EDO A 1 264 1 EDO EDO . D 3 EDO A 1 265 1 EDO EDO . E 3 EDO A 1 266 1 EDO EDO . F 3 EDO A 1 267 1 EDO EDO . G 4 HOH A 1 268 1 HOH HOH . G 4 HOH A 2 269 2 HOH HOH . G 4 HOH A 3 270 4 HOH HOH . G 4 HOH A 4 271 5 HOH HOH . G 4 HOH A 5 272 8 HOH HOH . G 4 HOH A 6 273 9 HOH HOH . G 4 HOH A 7 274 10 HOH HOH . G 4 HOH A 8 275 11 HOH HOH . G 4 HOH A 9 276 12 HOH HOH . G 4 HOH A 10 277 14 HOH HOH . G 4 HOH A 11 278 16 HOH HOH . G 4 HOH A 12 279 17 HOH HOH . G 4 HOH A 13 280 18 HOH HOH . G 4 HOH A 14 281 19 HOH HOH . G 4 HOH A 15 282 20 HOH HOH . G 4 HOH A 16 283 21 HOH HOH . G 4 HOH A 17 284 22 HOH HOH . G 4 HOH A 18 285 23 HOH HOH . G 4 HOH A 19 286 24 HOH HOH . G 4 HOH A 20 287 25 HOH HOH . G 4 HOH A 21 288 26 HOH HOH . G 4 HOH A 22 289 27 HOH HOH . G 4 HOH A 23 290 28 HOH HOH . G 4 HOH A 24 291 29 HOH HOH . G 4 HOH A 25 292 30 HOH HOH . G 4 HOH A 26 293 31 HOH HOH . G 4 HOH A 27 294 32 HOH HOH . G 4 HOH A 28 295 33 HOH HOH . G 4 HOH A 29 296 34 HOH HOH . G 4 HOH A 30 297 35 HOH HOH . G 4 HOH A 31 298 36 HOH HOH . G 4 HOH A 32 299 37 HOH HOH . G 4 HOH A 33 300 38 HOH HOH . G 4 HOH A 34 301 39 HOH HOH . G 4 HOH A 35 302 40 HOH HOH . G 4 HOH A 36 303 41 HOH HOH . G 4 HOH A 37 304 42 HOH HOH . G 4 HOH A 38 305 43 HOH HOH . G 4 HOH A 39 306 44 HOH HOH . G 4 HOH A 40 307 45 HOH HOH . G 4 HOH A 41 308 46 HOH HOH . G 4 HOH A 42 309 47 HOH HOH . G 4 HOH A 43 310 48 HOH HOH . G 4 HOH A 44 311 50 HOH HOH . G 4 HOH A 45 312 51 HOH HOH . G 4 HOH A 46 313 52 HOH HOH . G 4 HOH A 47 314 53 HOH HOH . G 4 HOH A 48 315 54 HOH HOH . G 4 HOH A 49 316 55 HOH HOH . G 4 HOH A 50 317 56 HOH HOH . G 4 HOH A 51 318 57 HOH HOH . G 4 HOH A 52 319 58 HOH HOH . G 4 HOH A 53 320 59 HOH HOH . G 4 HOH A 54 321 60 HOH HOH . G 4 HOH A 55 322 61 HOH HOH . G 4 HOH A 56 323 62 HOH HOH . G 4 HOH A 57 324 63 HOH HOH . G 4 HOH A 58 325 64 HOH HOH . G 4 HOH A 59 326 65 HOH HOH . G 4 HOH A 60 327 66 HOH HOH . G 4 HOH A 61 328 67 HOH HOH . G 4 HOH A 62 329 68 HOH HOH . G 4 HOH A 63 330 69 HOH HOH . G 4 HOH A 64 331 70 HOH HOH . G 4 HOH A 65 332 71 HOH HOH . G 4 HOH A 66 333 72 HOH HOH . G 4 HOH A 67 334 73 HOH HOH . G 4 HOH A 68 335 74 HOH HOH . G 4 HOH A 69 336 75 HOH HOH . G 4 HOH A 70 337 76 HOH HOH . G 4 HOH A 71 338 77 HOH HOH . G 4 HOH A 72 339 78 HOH HOH . G 4 HOH A 73 340 79 HOH HOH . G 4 HOH A 74 341 80 HOH HOH . G 4 HOH A 75 342 81 HOH HOH . G 4 HOH A 76 343 82 HOH HOH . G 4 HOH A 77 344 83 HOH HOH . G 4 HOH A 78 345 85 HOH HOH . G 4 HOH A 79 346 86 HOH HOH . G 4 HOH A 80 347 87 HOH HOH . G 4 HOH A 81 348 88 HOH HOH . G 4 HOH A 82 349 89 HOH HOH . G 4 HOH A 83 350 91 HOH HOH . G 4 HOH A 84 351 92 HOH HOH . G 4 HOH A 85 352 93 HOH HOH . G 4 HOH A 86 353 94 HOH HOH . G 4 HOH A 87 354 95 HOH HOH . G 4 HOH A 88 355 97 HOH HOH . G 4 HOH A 89 356 98 HOH HOH . G 4 HOH A 90 357 99 HOH HOH . G 4 HOH A 91 358 100 HOH HOH . G 4 HOH A 92 359 101 HOH HOH . G 4 HOH A 93 360 102 HOH HOH . G 4 HOH A 94 361 103 HOH HOH . G 4 HOH A 95 362 104 HOH HOH . G 4 HOH A 96 363 105 HOH HOH . G 4 HOH A 97 364 106 HOH HOH . G 4 HOH A 98 365 108 HOH HOH . G 4 HOH A 99 366 109 HOH HOH . G 4 HOH A 100 367 110 HOH HOH . G 4 HOH A 101 368 111 HOH HOH . G 4 HOH A 102 369 112 HOH HOH . G 4 HOH A 103 370 113 HOH HOH . G 4 HOH A 104 371 114 HOH HOH . G 4 HOH A 105 372 115 HOH HOH . G 4 HOH A 106 373 117 HOH HOH . G 4 HOH A 107 374 118 HOH HOH . G 4 HOH A 108 375 119 HOH HOH . G 4 HOH A 109 376 120 HOH HOH . G 4 HOH A 110 377 121 HOH HOH . G 4 HOH A 111 378 123 HOH HOH . G 4 HOH A 112 379 124 HOH HOH . G 4 HOH A 113 380 125 HOH HOH . G 4 HOH A 114 381 126 HOH HOH . G 4 HOH A 115 382 127 HOH HOH . G 4 HOH A 116 383 128 HOH HOH . G 4 HOH A 117 384 129 HOH HOH . G 4 HOH A 118 385 130 HOH HOH . G 4 HOH A 119 386 131 HOH HOH . G 4 HOH A 120 387 132 HOH HOH . G 4 HOH A 121 388 133 HOH HOH . G 4 HOH A 122 389 135 HOH HOH . G 4 HOH A 123 390 136 HOH HOH . G 4 HOH A 124 391 137 HOH HOH . G 4 HOH A 125 392 138 HOH HOH . G 4 HOH A 126 393 139 HOH HOH . G 4 HOH A 127 394 140 HOH HOH . G 4 HOH A 128 395 141 HOH HOH . G 4 HOH A 129 396 142 HOH HOH . G 4 HOH A 130 397 143 HOH HOH . G 4 HOH A 131 398 144 HOH HOH . G 4 HOH A 132 399 145 HOH HOH . G 4 HOH A 133 400 146 HOH HOH . G 4 HOH A 134 401 147 HOH HOH . G 4 HOH A 135 402 148 HOH HOH . G 4 HOH A 136 403 149 HOH HOH . G 4 HOH A 137 404 150 HOH HOH . G 4 HOH A 138 405 151 HOH HOH . G 4 HOH A 139 406 152 HOH HOH . G 4 HOH A 140 407 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 6.318 8.28 28.023 1 50.38 ? C1 EDO 264 A 1 HETATM 2 O O1 EDO . . . C 3 7.716 8.56 27.92 1 50.2 ? O1 EDO 264 A 1 HETATM 3 C C2 EDO . . . C 3 5.799 7.848 26.666 1 50.79 ? C2 EDO 264 A 1 HETATM 4 O O2 EDO . . . C 3 6.906 7.673 25.774 1 50.82 ? O2 EDO 264 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #