data_3U3L
#
_model_server_result.job_id            2iE0iTu5FkAVSiI8irKvMw 
_model_server_result.datetime_utc      '2025-04-19 12:41:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3u3l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":234}' 
#
_entry.id    3U3L 
#
_exptl.entry_id    3U3L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              140.908 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PRASEODYMIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3U3L 
_cell.length_a            69.556 
_cell.length_b            69.556 
_cell.length_c            86.209 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3U3L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 5 C CYS 4 1_555 A SG CYS 18 C CYS 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf2 A SG CYS 9 C CYS 8 1_555 A SG CYS 95 C CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf3 A SG CYS 27 C CYS 26 1_555 A SG CYS 88 C CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf4 A SG CYS 170 C CYS 169 1_555 A SG CYS 187 C CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
disulf ? disulf5 A SG CYS 210 C CYS 209 1_555 A SG CYS 221 C CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
covale ? covale1 A C ARG 67 C ARG 66 1_555 A N MSE 68 C MSE 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 A C MSE 68 C MSE 67 1_555 A N LYS 69 C LYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
metalc ? metalc1 A OE2 GLU 35 C GLU 34 1_555 C PR PR . C PR 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc2 C PR PR . C PR 234 1_555 D O4 CIT . C CIT 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc3 C PR PR . C PR 234 1_555 D O7 CIT . C CIT 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? 
metalc ? metalc4 C PR PR . C PR 234 1_555 D O6 CIT . C CIT 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? 
metalc ? metalc5 C PR PR . C PR 234 1_555 E O7 CIT . C CIT 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc6 C PR PR . C PR 234 1_555 E O2 CIT . C CIT 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? 
metalc ? metalc7 C PR PR . C PR 234 1_555 E O6 CIT . C CIT 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? 
metalc ? metalc8 C PR PR . C PR 234 1_555 F O HOH . C HOH 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? 
metalc ? metalc9 C PR PR . C PR 234 1_555 F O HOH . C HOH 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
#
_chem_comp.formula           'Pr 3' 
_chem_comp.formula_weight    140.908 
_chem_comp.id                PR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PRASEODYMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3U3L 
_atom_sites.fract_transf_matrix[1][1]    0.014377 
_atom_sites.fract_transf_matrix[1][2]    0.008301 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016601 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0116 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PLM C 1 233 1 PLM PLM . 
C 3 PR C 1 234 1 PR PR . 
D 4 CIT C 1 235 1 CIT CIT . 
E 4 CIT C 1 236 1 CIT CIT . 
F 5 HOH C 1 237 2 HOH HOH . 
F 5 HOH C 2 238 3 HOH HOH . 
F 5 HOH C 3 239 5 HOH HOH . 
F 5 HOH C 4 240 6 HOH HOH . 
F 5 HOH C 5 241 7 HOH HOH . 
F 5 HOH C 6 242 8 HOH HOH . 
F 5 HOH C 7 243 9 HOH HOH . 
F 5 HOH C 8 244 10 HOH HOH . 
F 5 HOH C 9 245 12 HOH HOH . 
F 5 HOH C 10 246 13 HOH HOH . 
F 5 HOH C 11 247 14 HOH HOH . 
F 5 HOH C 12 248 15 HOH HOH . 
F 5 HOH C 13 249 17 HOH HOH . 
F 5 HOH C 14 250 18 HOH HOH . 
F 5 HOH C 15 251 19 HOH HOH . 
F 5 HOH C 16 252 20 HOH HOH . 
F 5 HOH C 17 253 21 HOH HOH . 
F 5 HOH C 18 254 22 HOH HOH . 
F 5 HOH C 19 255 23 HOH HOH . 
F 5 HOH C 20 256 24 HOH HOH . 
F 5 HOH C 21 257 25 HOH HOH . 
F 5 HOH C 22 258 26 HOH HOH . 
F 5 HOH C 23 259 27 HOH HOH . 
F 5 HOH C 24 260 28 HOH HOH . 
F 5 HOH C 25 261 29 HOH HOH . 
F 5 HOH C 26 262 30 HOH HOH . 
F 5 HOH C 27 263 31 HOH HOH . 
F 5 HOH C 28 264 32 HOH HOH . 
F 5 HOH C 29 265 33 HOH HOH . 
F 5 HOH C 30 266 34 HOH HOH . 
F 5 HOH C 31 267 35 HOH HOH . 
F 5 HOH C 32 268 37 HOH HOH . 
F 5 HOH C 33 269 38 HOH HOH . 
F 5 HOH C 34 270 39 HOH HOH . 
F 5 HOH C 35 271 40 HOH HOH . 
F 5 HOH C 36 272 41 HOH HOH . 
F 5 HOH C 37 273 43 HOH HOH . 
F 5 HOH C 38 274 45 HOH HOH . 
F 5 HOH C 39 275 46 HOH HOH . 
F 5 HOH C 40 276 47 HOH HOH . 
F 5 HOH C 41 277 48 HOH HOH . 
F 5 HOH C 42 278 49 HOH HOH . 
F 5 HOH C 43 279 50 HOH HOH . 
F 5 HOH C 44 280 51 HOH HOH . 
F 5 HOH C 45 281 52 HOH HOH . 
F 5 HOH C 46 282 53 HOH HOH . 
F 5 HOH C 47 283 54 HOH HOH . 
F 5 HOH C 48 284 55 HOH HOH . 
F 5 HOH C 49 285 56 HOH HOH . 
F 5 HOH C 50 286 57 HOH HOH . 
F 5 HOH C 51 287 58 HOH HOH . 
F 5 HOH C 52 288 59 HOH HOH . 
F 5 HOH C 53 289 60 HOH HOH . 
F 5 HOH C 54 290 61 HOH HOH . 
F 5 HOH C 55 291 62 HOH HOH . 
F 5 HOH C 56 292 63 HOH HOH . 
F 5 HOH C 57 293 64 HOH HOH . 
F 5 HOH C 58 294 65 HOH HOH . 
F 5 HOH C 59 295 66 HOH HOH . 
F 5 HOH C 60 296 67 HOH HOH . 
F 5 HOH C 61 297 68 HOH HOH . 
F 5 HOH C 62 298 69 HOH HOH . 
F 5 HOH C 63 299 70 HOH HOH . 
F 5 HOH C 64 300 71 HOH HOH . 
F 5 HOH C 65 301 72 HOH HOH . 
F 5 HOH C 66 302 73 HOH HOH . 
F 5 HOH C 67 303 74 HOH HOH . 
F 5 HOH C 68 304 75 HOH HOH . 
F 5 HOH C 69 305 76 HOH HOH . 
F 5 HOH C 70 306 77 HOH HOH . 
F 5 HOH C 71 307 78 HOH HOH . 
F 5 HOH C 72 308 79 HOH HOH . 
F 5 HOH C 73 309 80 HOH HOH . 
F 5 HOH C 74 310 81 HOH HOH . 
F 5 HOH C 75 311 82 HOH HOH . 
F 5 HOH C 76 312 83 HOH HOH . 
F 5 HOH C 77 313 84 HOH HOH . 
F 5 HOH C 78 314 85 HOH HOH . 
F 5 HOH C 79 315 86 HOH HOH . 
F 5 HOH C 80 316 87 HOH HOH . 
F 5 HOH C 81 317 88 HOH HOH . 
F 5 HOH C 82 318 89 HOH HOH . 
F 5 HOH C 83 319 90 HOH HOH . 
F 5 HOH C 84 320 91 HOH HOH . 
F 5 HOH C 85 321 92 HOH HOH . 
F 5 HOH C 86 322 93 HOH HOH . 
F 5 HOH C 87 323 94 HOH HOH . 
F 5 HOH C 88 324 95 HOH HOH . 
F 5 HOH C 89 325 97 HOH HOH . 
F 5 HOH C 90 326 99 HOH HOH . 
F 5 HOH C 91 327 100 HOH HOH . 
F 5 HOH C 92 328 102 HOH HOH . 
F 5 HOH C 93 329 103 HOH HOH . 
F 5 HOH C 94 330 104 HOH HOH . 
F 5 HOH C 95 331 105 HOH HOH . 
F 5 HOH C 96 332 106 HOH HOH . 
F 5 HOH C 97 333 107 HOH HOH . 
F 5 HOH C 98 334 109 HOH HOH . 
F 5 HOH C 99 335 110 HOH HOH . 
F 5 HOH C 100 336 111 HOH HOH . 
F 5 HOH C 101 337 113 HOH HOH . 
F 5 HOH C 102 338 114 HOH HOH . 
F 5 HOH C 103 339 115 HOH HOH . 
F 5 HOH C 104 340 118 HOH HOH . 
F 5 HOH C 105 341 119 HOH HOH . 
F 5 HOH C 106 342 120 HOH HOH . 
F 5 HOH C 107 343 121 HOH HOH . 
F 5 HOH C 108 344 122 HOH HOH . 
F 5 HOH C 109 345 123 HOH HOH . 
F 5 HOH C 110 346 124 HOH HOH . 
F 5 HOH C 111 347 125 HOH HOH . 
F 5 HOH C 112 348 126 HOH HOH . 
F 5 HOH C 113 349 127 HOH HOH . 
F 5 HOH C 114 350 128 HOH HOH . 
F 5 HOH C 115 351 129 HOH HOH . 
F 5 HOH C 116 352 130 HOH HOH . 
F 5 HOH C 117 353 131 HOH HOH . 
F 5 HOH C 118 354 132 HOH HOH . 
F 5 HOH C 119 355 133 HOH HOH . 
F 5 HOH C 120 356 134 HOH HOH . 
F 5 HOH C 121 357 135 HOH HOH . 
F 5 HOH C 122 358 136 HOH HOH . 
F 5 HOH C 123 359 137 HOH HOH . 
F 5 HOH C 124 360 138 HOH HOH . 
F 5 HOH C 125 361 139 HOH HOH . 
F 5 HOH C 126 362 140 HOH HOH . 
F 5 HOH C 127 363 141 HOH HOH . 
F 5 HOH C 128 364 142 HOH HOH . 
F 5 HOH C 129 365 143 HOH HOH . 
F 5 HOH C 130 366 144 HOH HOH . 
F 5 HOH C 131 367 145 HOH HOH . 
F 5 HOH C 132 368 146 HOH HOH . 
F 5 HOH C 133 369 147 HOH HOH . 
F 5 HOH C 134 370 148 HOH HOH . 
F 5 HOH C 135 371 149 HOH HOH . 
F 5 HOH C 136 372 150 HOH HOH . 
F 5 HOH C 137 373 152 HOH HOH . 
F 5 HOH C 138 374 154 HOH HOH . 
F 5 HOH C 139 375 155 HOH HOH . 
F 5 HOH C 140 376 156 HOH HOH . 
F 5 HOH C 141 377 157 HOH HOH . 
F 5 HOH C 142 378 159 HOH HOH . 
F 5 HOH C 143 379 160 HOH HOH . 
F 5 HOH C 144 380 161 HOH HOH . 
F 5 HOH C 145 381 162 HOH HOH . 
F 5 HOH C 146 382 164 HOH HOH . 
F 5 HOH C 147 383 165 HOH HOH . 
F 5 HOH C 148 384 166 HOH HOH . 
F 5 HOH C 149 385 168 HOH HOH . 
F 5 HOH C 150 386 169 HOH HOH . 
F 5 HOH C 151 387 170 HOH HOH . 
F 5 HOH C 152 388 171 HOH HOH . 
F 5 HOH C 153 389 172 HOH HOH . 
F 5 HOH C 154 390 173 HOH HOH . 
F 5 HOH C 155 391 174 HOH HOH . 
F 5 HOH C 156 392 175 HOH HOH . 
F 5 HOH C 157 393 176 HOH HOH . 
F 5 HOH C 158 394 177 HOH HOH . 
F 5 HOH C 159 395 178 HOH HOH . 
F 5 HOH C 160 396 179 HOH HOH . 
F 5 HOH C 161 397 180 HOH HOH . 
F 5 HOH C 162 398 182 HOH HOH . 
F 5 HOH C 163 399 2 HOH HOH . 
F 5 HOH C 164 400 3 HOH HOH . 
F 5 HOH C 165 401 4 HOH HOH . 
F 5 HOH C 166 402 5 HOH HOH . 
F 5 HOH C 167 403 6 HOH HOH . 
F 5 HOH C 168 404 7 HOH HOH . 
F 5 HOH C 169 405 8 HOH HOH . 
F 5 HOH C 170 406 9 HOH HOH . 
F 5 HOH C 171 407 10 HOH HOH . 
F 5 HOH C 172 408 11 HOH HOH . 
F 5 HOH C 173 409 12 HOH HOH . 
F 5 HOH C 174 410 14 HOH HOH . 
F 5 HOH C 175 411 15 HOH HOH . 
F 5 HOH C 176 412 16 HOH HOH . 
F 5 HOH C 177 413 17 HOH HOH . 
F 5 HOH C 178 414 18 HOH HOH . 
F 5 HOH C 179 415 19 HOH HOH . 
F 5 HOH C 180 416 20 HOH HOH . 
F 5 HOH C 181 417 21 HOH HOH . 
F 5 HOH C 182 418 22 HOH HOH . 
F 5 HOH C 183 419 23 HOH HOH . 
F 5 HOH C 184 420 24 HOH HOH . 
F 5 HOH C 185 421 25 HOH HOH . 
F 5 HOH C 186 422 26 HOH HOH . 
F 5 HOH C 187 423 27 HOH HOH . 
F 5 HOH C 188 424 28 HOH HOH . 
F 5 HOH C 189 425 29 HOH HOH . 
F 5 HOH C 190 426 30 HOH HOH . 
F 5 HOH C 191 427 31 HOH HOH . 
F 5 HOH C 192 428 32 HOH HOH . 
F 5 HOH C 193 429 33 HOH HOH . 
F 5 HOH C 194 430 34 HOH HOH . 
F 5 HOH C 195 431 35 HOH HOH . 
F 5 HOH C 196 432 36 HOH HOH . 
F 5 HOH C 197 433 37 HOH HOH . 
F 5 HOH C 198 434 38 HOH HOH . 
F 5 HOH C 199 435 39 HOH HOH . 
F 5 HOH C 200 436 41 HOH HOH . 
F 5 HOH C 201 437 42 HOH HOH . 
F 5 HOH C 202 438 43 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           PR 
_atom_site.label_atom_id         PR 
_atom_site.label_comp_id         PR 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               32.494 
_atom_site.Cartn_y               13.299 
_atom_site.Cartn_z               10.422 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        23.55 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          PR 
_atom_site.auth_comp_id          PR 
_atom_site.auth_seq_id           234 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           1 
#