data_3U45 # _model_server_result.job_id VK7usm_ptfpIaSX4sG2JKg _model_server_result.datetime_utc '2024-11-21 18:11:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3u45 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1304}' # _entry.id 3U45 # _exptl.entry_id 3U45 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.44 _cell.angle_gamma 90 _cell.entry_id 3U45 _cell.length_a 42.25 _cell.length_b 41.593 _cell.length_c 72.26 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3U45 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 X HIS 94 1_555 B ZN ZN . X ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc2 A NE2 HIS 96 X HIS 96 1_555 B ZN ZN . X ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc3 A ND1 HIS 119 X HIS 119 1_555 B ZN ZN . X ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc4 B ZN ZN . X ZN 262 1_555 D O HOH . X HOH 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3U45 _atom_sites.fract_transf_matrix[1][1] 0.023669 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006094 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024043 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01429 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN X 1 262 262 ZN ZN . C 3 GOL X 1 1304 1304 GOL GOL . D 4 HOH X 1 126 126 HOH HOH . D 4 HOH X 2 263 263 HOH HOH . D 4 HOH X 3 264 264 HOH HOH . D 4 HOH X 4 265 1 HOH HOH . D 4 HOH X 5 266 266 HOH HOH . D 4 HOH X 6 267 267 HOH HOH . D 4 HOH X 7 268 268 HOH HOH . D 4 HOH X 8 269 2 HOH HOH . D 4 HOH X 9 270 3 HOH HOH . D 4 HOH X 10 271 271 HOH HOH . D 4 HOH X 11 272 272 HOH HOH . D 4 HOH X 12 273 273 HOH HOH . D 4 HOH X 13 274 274 HOH HOH . D 4 HOH X 14 275 4 HOH HOH . D 4 HOH X 15 276 5 HOH HOH . D 4 HOH X 16 277 6 HOH HOH . D 4 HOH X 17 278 7 HOH HOH . D 4 HOH X 18 279 8 HOH HOH . D 4 HOH X 19 280 280 HOH HOH . D 4 HOH X 20 281 281 HOH HOH . D 4 HOH X 21 282 282 HOH HOH . D 4 HOH X 22 283 9 HOH HOH . D 4 HOH X 23 284 284 HOH HOH . D 4 HOH X 24 285 10 HOH HOH . D 4 HOH X 25 286 11 HOH HOH . D 4 HOH X 26 287 287 HOH HOH . D 4 HOH X 27 288 12 HOH HOH . D 4 HOH X 28 289 13 HOH HOH . D 4 HOH X 29 290 290 HOH HOH . D 4 HOH X 30 291 14 HOH HOH . D 4 HOH X 31 292 15 HOH HOH . D 4 HOH X 32 293 16 HOH HOH . D 4 HOH X 33 294 294 HOH HOH . D 4 HOH X 34 295 295 HOH HOH . D 4 HOH X 35 296 17 HOH HOH . D 4 HOH X 36 297 297 HOH HOH . D 4 HOH X 37 298 18 HOH HOH . D 4 HOH X 38 299 299 HOH HOH . D 4 HOH X 39 300 19 HOH HOH . D 4 HOH X 40 301 301 HOH HOH . D 4 HOH X 41 302 20 HOH HOH . D 4 HOH X 42 303 303 HOH HOH . D 4 HOH X 43 304 304 HOH HOH . D 4 HOH X 44 305 305 HOH HOH . D 4 HOH X 45 306 21 HOH HOH . D 4 HOH X 46 307 22 HOH HOH . D 4 HOH X 47 308 23 HOH HOH . D 4 HOH X 48 309 24 HOH HOH . D 4 HOH X 49 310 25 HOH HOH . D 4 HOH X 50 311 26 HOH HOH . D 4 HOH X 51 312 27 HOH HOH . D 4 HOH X 52 313 28 HOH HOH . D 4 HOH X 53 314 29 HOH HOH . D 4 HOH X 54 315 315 HOH HOH . D 4 HOH X 55 316 30 HOH HOH . D 4 HOH X 56 317 31 HOH HOH . D 4 HOH X 57 318 32 HOH HOH . D 4 HOH X 58 319 34 HOH HOH . D 4 HOH X 59 320 35 HOH HOH . D 4 HOH X 60 321 36 HOH HOH . D 4 HOH X 61 322 37 HOH HOH . D 4 HOH X 62 323 38 HOH HOH . D 4 HOH X 63 324 39 HOH HOH . D 4 HOH X 64 325 325 HOH HOH . D 4 HOH X 65 326 326 HOH HOH . D 4 HOH X 66 327 40 HOH HOH . D 4 HOH X 67 328 41 HOH HOH . D 4 HOH X 68 329 329 HOH HOH . D 4 HOH X 69 330 330 HOH HOH . D 4 HOH X 70 331 42 HOH HOH . D 4 HOH X 71 332 332 HOH HOH . D 4 HOH X 72 333 333 HOH HOH . D 4 HOH X 73 334 334 HOH HOH . D 4 HOH X 74 335 335 HOH HOH . D 4 HOH X 75 336 336 HOH HOH . D 4 HOH X 76 337 337 HOH HOH . D 4 HOH X 77 338 338 HOH HOH . D 4 HOH X 78 339 339 HOH HOH . D 4 HOH X 79 340 340 HOH HOH . D 4 HOH X 80 341 341 HOH HOH . D 4 HOH X 81 342 342 HOH HOH . D 4 HOH X 82 343 343 HOH HOH . D 4 HOH X 83 344 344 HOH HOH . D 4 HOH X 84 345 345 HOH HOH . D 4 HOH X 85 346 346 HOH HOH . D 4 HOH X 86 347 347 HOH HOH . D 4 HOH X 87 348 348 HOH HOH . D 4 HOH X 88 349 349 HOH HOH . D 4 HOH X 89 350 350 HOH HOH . D 4 HOH X 90 351 351 HOH HOH . D 4 HOH X 91 352 352 HOH HOH . D 4 HOH X 92 353 353 HOH HOH . D 4 HOH X 93 354 43 HOH HOH . D 4 HOH X 94 355 45 HOH HOH . D 4 HOH X 95 356 46 HOH HOH . D 4 HOH X 96 357 47 HOH HOH . D 4 HOH X 97 358 48 HOH HOH . D 4 HOH X 98 359 49 HOH HOH . D 4 HOH X 99 360 50 HOH HOH . D 4 HOH X 100 361 51 HOH HOH . D 4 HOH X 101 362 52 HOH HOH . D 4 HOH X 102 363 53 HOH HOH . D 4 HOH X 103 364 54 HOH HOH . D 4 HOH X 104 365 55 HOH HOH . D 4 HOH X 105 366 56 HOH HOH . D 4 HOH X 106 367 57 HOH HOH . D 4 HOH X 107 368 58 HOH HOH . D 4 HOH X 108 369 59 HOH HOH . D 4 HOH X 109 370 60 HOH HOH . D 4 HOH X 110 371 61 HOH HOH . D 4 HOH X 111 372 62 HOH HOH . D 4 HOH X 112 373 63 HOH HOH . D 4 HOH X 113 374 64 HOH HOH . D 4 HOH X 114 375 65 HOH HOH . D 4 HOH X 115 376 66 HOH HOH . D 4 HOH X 116 377 67 HOH HOH . D 4 HOH X 117 378 68 HOH HOH . D 4 HOH X 118 379 69 HOH HOH . D 4 HOH X 119 380 70 HOH HOH . D 4 HOH X 120 381 71 HOH HOH . D 4 HOH X 121 382 72 HOH HOH . D 4 HOH X 122 383 73 HOH HOH . D 4 HOH X 123 384 74 HOH HOH . D 4 HOH X 124 385 75 HOH HOH . D 4 HOH X 125 386 76 HOH HOH . D 4 HOH X 126 387 77 HOH HOH . D 4 HOH X 127 388 78 HOH HOH . D 4 HOH X 128 389 79 HOH HOH . D 4 HOH X 129 390 80 HOH HOH . D 4 HOH X 130 391 81 HOH HOH . D 4 HOH X 131 392 82 HOH HOH . D 4 HOH X 132 393 83 HOH HOH . D 4 HOH X 133 394 84 HOH HOH . D 4 HOH X 134 395 85 HOH HOH . D 4 HOH X 135 396 86 HOH HOH . D 4 HOH X 136 397 87 HOH HOH . D 4 HOH X 137 398 88 HOH HOH . D 4 HOH X 138 399 89 HOH HOH . D 4 HOH X 139 400 90 HOH HOH . D 4 HOH X 140 401 91 HOH HOH . D 4 HOH X 141 402 92 HOH HOH . D 4 HOH X 142 403 93 HOH HOH . D 4 HOH X 143 404 94 HOH HOH . D 4 HOH X 144 405 95 HOH HOH . D 4 HOH X 145 406 96 HOH HOH . D 4 HOH X 146 407 97 HOH HOH . D 4 HOH X 147 408 98 HOH HOH . D 4 HOH X 148 409 99 HOH HOH . D 4 HOH X 149 410 100 HOH HOH . D 4 HOH X 150 411 101 HOH HOH . D 4 HOH X 151 412 102 HOH HOH . D 4 HOH X 152 413 103 HOH HOH . D 4 HOH X 153 414 104 HOH HOH . D 4 HOH X 154 415 105 HOH HOH . D 4 HOH X 155 416 106 HOH HOH . D 4 HOH X 156 417 107 HOH HOH . D 4 HOH X 157 418 108 HOH HOH . D 4 HOH X 158 419 109 HOH HOH . D 4 HOH X 159 420 110 HOH HOH . D 4 HOH X 160 421 111 HOH HOH . D 4 HOH X 161 422 112 HOH HOH . D 4 HOH X 162 423 113 HOH HOH . D 4 HOH X 163 424 114 HOH HOH . D 4 HOH X 164 425 115 HOH HOH . D 4 HOH X 165 426 116 HOH HOH . D 4 HOH X 166 427 117 HOH HOH . D 4 HOH X 167 428 118 HOH HOH . D 4 HOH X 168 429 119 HOH HOH . D 4 HOH X 169 430 120 HOH HOH . D 4 HOH X 170 431 121 HOH HOH . D 4 HOH X 171 432 122 HOH HOH . D 4 HOH X 172 433 123 HOH HOH . D 4 HOH X 173 434 124 HOH HOH . D 4 HOH X 174 435 125 HOH HOH . D 4 HOH X 175 436 127 HOH HOH . D 4 HOH X 176 437 128 HOH HOH . D 4 HOH X 177 438 129 HOH HOH . D 4 HOH X 178 439 130 HOH HOH . D 4 HOH X 179 440 131 HOH HOH . D 4 HOH X 180 441 132 HOH HOH . D 4 HOH X 181 442 133 HOH HOH . D 4 HOH X 182 443 134 HOH HOH . D 4 HOH X 183 444 135 HOH HOH . D 4 HOH X 184 445 136 HOH HOH . D 4 HOH X 185 446 137 HOH HOH . D 4 HOH X 186 447 138 HOH HOH . D 4 HOH X 187 448 139 HOH HOH . D 4 HOH X 188 449 140 HOH HOH . D 4 HOH X 189 450 141 HOH HOH . D 4 HOH X 190 451 142 HOH HOH . D 4 HOH X 191 452 143 HOH HOH . D 4 HOH X 192 453 144 HOH HOH . D 4 HOH X 193 454 145 HOH HOH . D 4 HOH X 194 455 146 HOH HOH . D 4 HOH X 195 456 147 HOH HOH . D 4 HOH X 196 457 148 HOH HOH . D 4 HOH X 197 458 150 HOH HOH . D 4 HOH X 198 459 151 HOH HOH . D 4 HOH X 199 460 152 HOH HOH . D 4 HOH X 200 461 153 HOH HOH . D 4 HOH X 201 462 154 HOH HOH . D 4 HOH X 202 463 155 HOH HOH . D 4 HOH X 203 464 156 HOH HOH . D 4 HOH X 204 465 157 HOH HOH . D 4 HOH X 205 466 158 HOH HOH . D 4 HOH X 206 467 159 HOH HOH . D 4 HOH X 207 468 160 HOH HOH . D 4 HOH X 208 469 161 HOH HOH . D 4 HOH X 209 470 162 HOH HOH . D 4 HOH X 210 471 163 HOH HOH . D 4 HOH X 211 472 164 HOH HOH . D 4 HOH X 212 473 165 HOH HOH . D 4 HOH X 213 474 166 HOH HOH . D 4 HOH X 214 475 167 HOH HOH . D 4 HOH X 215 476 168 HOH HOH . D 4 HOH X 216 477 169 HOH HOH . D 4 HOH X 217 478 170 HOH HOH . D 4 HOH X 218 479 171 HOH HOH . D 4 HOH X 219 480 172 HOH HOH . D 4 HOH X 220 481 175 HOH HOH . D 4 HOH X 221 482 176 HOH HOH . D 4 HOH X 222 483 177 HOH HOH . D 4 HOH X 223 484 179 HOH HOH . D 4 HOH X 224 485 180 HOH HOH . D 4 HOH X 225 486 181 HOH HOH . D 4 HOH X 226 487 182 HOH HOH . D 4 HOH X 227 488 183 HOH HOH . D 4 HOH X 228 489 185 HOH HOH . D 4 HOH X 229 490 186 HOH HOH . D 4 HOH X 230 491 187 HOH HOH . D 4 HOH X 231 492 188 HOH HOH . D 4 HOH X 232 493 190 HOH HOH . D 4 HOH X 233 494 191 HOH HOH . D 4 HOH X 234 495 192 HOH HOH . D 4 HOH X 235 496 194 HOH HOH . D 4 HOH X 236 497 196 HOH HOH . D 4 HOH X 237 498 197 HOH HOH . D 4 HOH X 238 499 198 HOH HOH . D 4 HOH X 239 500 199 HOH HOH . D 4 HOH X 240 501 200 HOH HOH . D 4 HOH X 241 502 202 HOH HOH . D 4 HOH X 242 503 203 HOH HOH . D 4 HOH X 243 504 204 HOH HOH . D 4 HOH X 244 505 206 HOH HOH . D 4 HOH X 245 506 207 HOH HOH . D 4 HOH X 246 507 209 HOH HOH . D 4 HOH X 247 508 210 HOH HOH . D 4 HOH X 248 509 211 HOH HOH . D 4 HOH X 249 510 212 HOH HOH . D 4 HOH X 250 511 213 HOH HOH . D 4 HOH X 251 512 215 HOH HOH . D 4 HOH X 252 513 217 HOH HOH . D 4 HOH X 253 514 218 HOH HOH . D 4 HOH X 254 515 219 HOH HOH . D 4 HOH X 255 516 222 HOH HOH . D 4 HOH X 256 517 224 HOH HOH . D 4 HOH X 257 518 227 HOH HOH . D 4 HOH X 258 519 228 HOH HOH . D 4 HOH X 259 520 229 HOH HOH . D 4 HOH X 260 521 235 HOH HOH . D 4 HOH X 261 522 236 HOH HOH . D 4 HOH X 262 523 241 HOH HOH . D 4 HOH X 263 524 242 HOH HOH . D 4 HOH X 264 525 243 HOH HOH . D 4 HOH X 265 526 244 HOH HOH . D 4 HOH X 266 527 245 HOH HOH . D 4 HOH X 267 528 246 HOH HOH . D 4 HOH X 268 529 247 HOH HOH . D 4 HOH X 269 530 248 HOH HOH . D 4 HOH X 270 531 250 HOH HOH . D 4 HOH X 271 532 252 HOH HOH . D 4 HOH X 272 533 253 HOH HOH . D 4 HOH X 273 534 255 HOH HOH . D 4 HOH X 274 535 256 HOH HOH . D 4 HOH X 275 536 257 HOH HOH . D 4 HOH X 276 537 258 HOH HOH . D 4 HOH X 277 538 259 HOH HOH . D 4 HOH X 278 539 260 HOH HOH . D 4 HOH X 279 540 261 HOH HOH . D 4 HOH X 280 541 262 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 23.354 -10.961 15.541 1 25.15 ? C1 GOL 1304 X 1 HETATM 2 O O1 GOL . . . C 3 22.706 -11.21 16.768 1 17.28 ? O1 GOL 1304 X 1 HETATM 3 C C2 GOL . . . C 3 22.86 -11.998 14.547 1 24.89 ? C2 GOL 1304 X 1 HETATM 4 O O2 GOL . . . C 3 23.429 -11.742 13.282 1 17.21 ? O2 GOL 1304 X 1 HETATM 5 C C3 GOL . . . C 3 23.291 -13.38 15.029 1 31.68 ? C3 GOL 1304 X 1 HETATM 6 O O3 GOL . . . C 3 22.781 -14.364 14.155 1 38.17 ? O3 GOL 1304 X 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #