data_3U53
#
_model_server_result.job_id            4wXCxEWkXoFRkTTqn1v2Ew 
_model_server_result.datetime_utc      '2024-10-19 00:52:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3u53 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":159}' 
#
_entry.id    3U53 
#
_exptl.entry_id    3U53 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3U53 
_cell.length_a            72.485 
_cell.length_b            72.485 
_cell.length_c            133.491 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3U53 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,W 1 1 
B,I,J,K,L,X 2 1 
C,M,N,O,P,Q,Y 3 1 
D,R,S,T,U,V,Z 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             H 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3U53 
_atom_sites.fract_transf_matrix[1][1]    0.013796 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013796 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007491 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 A 1 156 1 SO4 SO4 . 
F 2 SO4 A 1 157 11 SO4 SO4 . 
G 2 SO4 A 1 158 16 SO4 SO4 . 
H 3 GOL A 1 159 1 GOL GOL . 
I 2 SO4 B 1 156 3 SO4 SO4 . 
J 2 SO4 B 1 157 8 SO4 SO4 . 
K 2 SO4 B 1 158 13 SO4 SO4 . 
L 2 SO4 B 1 159 18 SO4 SO4 . 
M 2 SO4 C 1 156 4 SO4 SO4 . 
N 2 SO4 C 1 157 5 SO4 SO4 . 
O 2 SO4 C 1 158 9 SO4 SO4 . 
P 2 SO4 C 1 159 14 SO4 SO4 . 
Q 2 SO4 C 1 160 17 SO4 SO4 . 
R 2 SO4 D 1 156 2 SO4 SO4 . 
S 2 SO4 D 1 157 6 SO4 SO4 . 
T 2 SO4 D 1 158 7 SO4 SO4 . 
U 2 SO4 D 1 159 10 SO4 SO4 . 
V 2 SO4 D 1 160 15 SO4 SO4 . 
W 4 HOH A 1 160 160 HOH HOH . 
W 4 HOH A 2 161 161 HOH HOH . 
W 4 HOH A 3 162 1 HOH HOH . 
W 4 HOH A 4 163 4 HOH HOH . 
W 4 HOH A 5 164 17 HOH HOH . 
W 4 HOH A 6 165 18 HOH HOH . 
W 4 HOH A 7 166 19 HOH HOH . 
W 4 HOH A 8 167 23 HOH HOH . 
W 4 HOH A 9 168 24 HOH HOH . 
W 4 HOH A 10 169 41 HOH HOH . 
W 4 HOH A 11 170 43 HOH HOH . 
W 4 HOH A 12 171 44 HOH HOH . 
W 4 HOH A 13 172 45 HOH HOH . 
W 4 HOH A 14 173 46 HOH HOH . 
W 4 HOH A 15 174 57 HOH HOH . 
W 4 HOH A 16 175 58 HOH HOH . 
W 4 HOH A 17 176 59 HOH HOH . 
W 4 HOH A 18 177 64 HOH HOH . 
W 4 HOH A 19 178 75 HOH HOH . 
W 4 HOH A 20 179 77 HOH HOH . 
W 4 HOH A 21 180 81 HOH HOH . 
W 4 HOH A 22 181 82 HOH HOH . 
W 4 HOH A 23 182 92 HOH HOH . 
W 4 HOH A 24 183 99 HOH HOH . 
W 4 HOH A 25 184 113 HOH HOH . 
W 4 HOH A 26 185 114 HOH HOH . 
W 4 HOH A 27 186 116 HOH HOH . 
W 4 HOH A 28 187 118 HOH HOH . 
W 4 HOH A 29 188 124 HOH HOH . 
W 4 HOH A 30 189 126 HOH HOH . 
W 4 HOH A 31 190 131 HOH HOH . 
W 4 HOH A 32 191 132 HOH HOH . 
W 4 HOH A 33 192 136 HOH HOH . 
W 4 HOH A 34 193 137 HOH HOH . 
W 4 HOH A 35 194 139 HOH HOH . 
W 4 HOH A 36 195 140 HOH HOH . 
W 4 HOH A 37 196 141 HOH HOH . 
W 4 HOH A 38 197 152 HOH HOH . 
W 4 HOH A 39 198 153 HOH HOH . 
X 4 HOH B 1 160 2 HOH HOH . 
X 4 HOH B 2 161 9 HOH HOH . 
X 4 HOH B 3 162 11 HOH HOH . 
X 4 HOH B 4 163 163 HOH HOH . 
X 4 HOH B 5 164 15 HOH HOH . 
X 4 HOH B 6 165 27 HOH HOH . 
X 4 HOH B 7 166 29 HOH HOH . 
X 4 HOH B 8 167 30 HOH HOH . 
X 4 HOH B 9 168 31 HOH HOH . 
X 4 HOH B 10 169 32 HOH HOH . 
X 4 HOH B 11 170 33 HOH HOH . 
X 4 HOH B 12 171 47 HOH HOH . 
X 4 HOH B 13 172 48 HOH HOH . 
X 4 HOH B 14 173 49 HOH HOH . 
X 4 HOH B 15 174 60 HOH HOH . 
X 4 HOH B 16 175 62 HOH HOH . 
X 4 HOH B 17 176 67 HOH HOH . 
X 4 HOH B 18 177 70 HOH HOH . 
X 4 HOH B 19 178 73 HOH HOH . 
X 4 HOH B 20 179 87 HOH HOH . 
X 4 HOH B 21 180 89 HOH HOH . 
X 4 HOH B 22 181 93 HOH HOH . 
X 4 HOH B 23 182 94 HOH HOH . 
X 4 HOH B 24 183 95 HOH HOH . 
X 4 HOH B 25 184 96 HOH HOH . 
X 4 HOH B 26 185 97 HOH HOH . 
X 4 HOH B 27 186 98 HOH HOH . 
X 4 HOH B 28 187 100 HOH HOH . 
X 4 HOH B 29 188 105 HOH HOH . 
X 4 HOH B 30 189 106 HOH HOH . 
X 4 HOH B 31 190 107 HOH HOH . 
X 4 HOH B 32 191 108 HOH HOH . 
X 4 HOH B 33 192 109 HOH HOH . 
X 4 HOH B 34 193 119 HOH HOH . 
X 4 HOH B 35 194 120 HOH HOH . 
X 4 HOH B 36 195 121 HOH HOH . 
X 4 HOH B 37 196 142 HOH HOH . 
X 4 HOH B 38 197 143 HOH HOH . 
X 4 HOH B 39 198 150 HOH HOH . 
X 4 HOH B 40 199 154 HOH HOH . 
X 4 HOH B 41 200 155 HOH HOH . 
X 4 HOH B 42 201 157 HOH HOH . 
X 4 HOH B 43 202 159 HOH HOH . 
Y 4 HOH C 1 161 10 HOH HOH . 
Y 4 HOH C 2 162 162 HOH HOH . 
Y 4 HOH C 3 163 12 HOH HOH . 
Y 4 HOH C 4 164 164 HOH HOH . 
Y 4 HOH C 5 165 22 HOH HOH . 
Y 4 HOH C 6 166 25 HOH HOH . 
Y 4 HOH C 7 167 26 HOH HOH . 
Y 4 HOH C 8 168 28 HOH HOH . 
Y 4 HOH C 9 169 34 HOH HOH . 
Y 4 HOH C 10 170 35 HOH HOH . 
Y 4 HOH C 11 171 37 HOH HOH . 
Y 4 HOH C 12 172 50 HOH HOH . 
Y 4 HOH C 13 173 56 HOH HOH . 
Y 4 HOH C 14 174 61 HOH HOH . 
Y 4 HOH C 15 175 63 HOH HOH . 
Y 4 HOH C 16 176 66 HOH HOH . 
Y 4 HOH C 17 177 72 HOH HOH . 
Y 4 HOH C 18 178 74 HOH HOH . 
Y 4 HOH C 19 179 76 HOH HOH . 
Y 4 HOH C 20 180 80 HOH HOH . 
Y 4 HOH C 21 181 83 HOH HOH . 
Y 4 HOH C 22 182 85 HOH HOH . 
Y 4 HOH C 23 183 88 HOH HOH . 
Y 4 HOH C 24 184 101 HOH HOH . 
Y 4 HOH C 25 185 111 HOH HOH . 
Y 4 HOH C 26 186 115 HOH HOH . 
Y 4 HOH C 27 187 135 HOH HOH . 
Y 4 HOH C 28 188 144 HOH HOH . 
Y 4 HOH C 29 189 145 HOH HOH . 
Y 4 HOH C 30 190 146 HOH HOH . 
Y 4 HOH C 31 191 151 HOH HOH . 
Z 4 HOH D 1 161 3 HOH HOH . 
Z 4 HOH D 2 162 5 HOH HOH . 
Z 4 HOH D 3 163 7 HOH HOH . 
Z 4 HOH D 4 164 8 HOH HOH . 
Z 4 HOH D 5 165 165 HOH HOH . 
Z 4 HOH D 6 166 166 HOH HOH . 
Z 4 HOH D 7 167 13 HOH HOH . 
Z 4 HOH D 8 168 16 HOH HOH . 
Z 4 HOH D 9 169 20 HOH HOH . 
Z 4 HOH D 10 170 21 HOH HOH . 
Z 4 HOH D 11 171 38 HOH HOH . 
Z 4 HOH D 12 172 39 HOH HOH . 
Z 4 HOH D 13 173 40 HOH HOH . 
Z 4 HOH D 14 174 42 HOH HOH . 
Z 4 HOH D 15 175 51 HOH HOH . 
Z 4 HOH D 16 176 52 HOH HOH . 
Z 4 HOH D 17 177 53 HOH HOH . 
Z 4 HOH D 18 178 54 HOH HOH . 
Z 4 HOH D 19 179 55 HOH HOH . 
Z 4 HOH D 20 180 65 HOH HOH . 
Z 4 HOH D 21 181 68 HOH HOH . 
Z 4 HOH D 22 182 69 HOH HOH . 
Z 4 HOH D 23 183 78 HOH HOH . 
Z 4 HOH D 24 184 79 HOH HOH . 
Z 4 HOH D 25 185 90 HOH HOH . 
Z 4 HOH D 26 186 91 HOH HOH . 
Z 4 HOH D 27 187 110 HOH HOH . 
Z 4 HOH D 28 188 123 HOH HOH . 
Z 4 HOH D 29 189 127 HOH HOH . 
Z 4 HOH D 30 190 130 HOH HOH . 
Z 4 HOH D 31 191 134 HOH HOH . 
Z 4 HOH D 32 192 147 HOH HOH . 
Z 4 HOH D 33 193 148 HOH HOH . 
Z 4 HOH D 34 194 149 HOH HOH . 
Z 4 HOH D 35 195 156 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 3 5.378 -18.722 -16.615 1 83.74 ? C1 GOL 159 A 1 
HETATM 2 O O1 GOL . . . H 3 5.119 -17.334 -16.711 1 83.27 ? O1 GOL 159 A 1 
HETATM 3 C C2 GOL . . . H 3 4.23 -19.455 -17.295 1 85.31 ? C2 GOL 159 A 1 
HETATM 4 O O2 GOL . . . H 3 3.002 -19.016 -16.738 1 85.32 ? O2 GOL 159 A 1 
HETATM 5 C C3 GOL . . . H 3 4.411 -20.985 -17.259 1 86.74 ? C3 GOL 159 A 1 
HETATM 6 O O3 GOL . . . H 3 4.892 -21.534 -18.493 1 86.27 ? O3 GOL 159 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           322 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#