data_3U5J # _model_server_result.job_id iBoFxdq7E9QutOse5wYcbw _model_server_result.datetime_utc '2024-11-29 19:40:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3u5j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3U5J # _exptl.entry_id 3U5J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 308.765 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8-chloro-1-methyl-6-phenyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3U5J _cell.length_a 37.3 _cell.length_b 44.21 _cell.length_c 78.36 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3U5J _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H13 Cl N4' _chem_comp.formula_weight 308.765 _chem_comp.id 08H _chem_comp.mon_nstd_flag . _chem_comp.name 8-chloro-1-methyl-6-phenyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ALPRAZOLAM # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAE CAC 08H doub 1 n y CAE CAG 08H sing 2 n y CAC CAD 08H sing 3 n y CAG CAQ 08H doub 4 n y CAD CAF 08H doub 5 n y CAQ CAF 08H sing 6 n y CAQ CAO 08H sing 7 n n NAL CAO 08H doub 8 n n NAL CAK 08H sing 9 n n CAO CAS 08H sing 10 n n CAK CAT 08H sing 11 n n CAS CAJ 08H doub 12 n y CAS CAU 08H sing 13 n y CAJ CAP 08H sing 14 n y CAT NAN 08H doub 15 n y CAT NAV 08H sing 16 n y NAN NAM 08H sing 17 n y NAV CAU 08H sing 18 n n NAV CAR 08H sing 19 n y CAU CAI 08H doub 20 n y CAP CLAB 08H sing 21 n n CAP CAH 08H doub 22 n y NAM CAR 08H doub 23 n y CAR CAA 08H sing 24 n n CAI CAH 08H sing 25 n y CAJ H1 08H sing 26 n n CAH H2 08H sing 27 n n CAI H3 08H sing 28 n n CAA H4 08H sing 29 n n CAA H5 08H sing 30 n n CAA H6 08H sing 31 n n CAK H7 08H sing 32 n n CAK H8 08H sing 33 n n CAF H12 08H sing 34 n n CAD H13 08H sing 35 n n CAC H14 08H sing 36 n n CAE H15 08H sing 37 n n CAG H16 08H sing 38 n n # _atom_sites.entry_id 3U5J _atom_sites.fract_transf_matrix[1][1] 0.02681 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022619 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012762 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 08H A 1 1 1 08H DRG . C 3 EDO A 1 169 1 EDO EDO . D 3 EDO A 1 2 2 EDO EDO . E 3 EDO A 1 3 3 EDO EDO . F 3 EDO A 1 4 4 EDO EDO . G 4 HOH A 1 5 5 HOH HOH . G 4 HOH A 2 6 6 HOH HOH . G 4 HOH A 3 7 7 HOH HOH . G 4 HOH A 4 8 8 HOH HOH . G 4 HOH A 5 9 9 HOH HOH . G 4 HOH A 6 10 10 HOH HOH . G 4 HOH A 7 11 11 HOH HOH . G 4 HOH A 8 12 12 HOH HOH . G 4 HOH A 9 13 13 HOH HOH . G 4 HOH A 10 14 14 HOH HOH . G 4 HOH A 11 15 15 HOH HOH . G 4 HOH A 12 16 16 HOH HOH . G 4 HOH A 13 17 17 HOH HOH . G 4 HOH A 14 18 18 HOH HOH . G 4 HOH A 15 19 19 HOH HOH . G 4 HOH A 16 20 20 HOH HOH . G 4 HOH A 17 21 21 HOH HOH . G 4 HOH A 18 22 22 HOH HOH . G 4 HOH A 19 23 23 HOH HOH . G 4 HOH A 20 24 24 HOH HOH . G 4 HOH A 21 25 25 HOH HOH . G 4 HOH A 22 26 26 HOH HOH . G 4 HOH A 23 28 28 HOH HOH . G 4 HOH A 24 29 29 HOH HOH . G 4 HOH A 25 30 30 HOH HOH . G 4 HOH A 26 31 31 HOH HOH . G 4 HOH A 27 32 32 HOH HOH . G 4 HOH A 28 33 33 HOH HOH . G 4 HOH A 29 34 34 HOH HOH . G 4 HOH A 30 35 35 HOH HOH . G 4 HOH A 31 36 36 HOH HOH . G 4 HOH A 32 37 37 HOH HOH . G 4 HOH A 33 38 38 HOH HOH . G 4 HOH A 34 39 39 HOH HOH . G 4 HOH A 35 40 40 HOH HOH . G 4 HOH A 36 41 41 HOH HOH . G 4 HOH A 37 170 1 HOH HOH . G 4 HOH A 38 171 171 HOH HOH . G 4 HOH A 39 172 172 HOH HOH . G 4 HOH A 40 173 173 HOH HOH . G 4 HOH A 41 174 174 HOH HOH . G 4 HOH A 42 175 175 HOH HOH . G 4 HOH A 43 176 176 HOH HOH . G 4 HOH A 44 177 177 HOH HOH . G 4 HOH A 45 178 2 HOH HOH . G 4 HOH A 46 179 179 HOH HOH . G 4 HOH A 47 180 180 HOH HOH . G 4 HOH A 48 181 181 HOH HOH . G 4 HOH A 49 182 182 HOH HOH . G 4 HOH A 50 183 183 HOH HOH . G 4 HOH A 51 184 184 HOH HOH . G 4 HOH A 52 185 185 HOH HOH . G 4 HOH A 53 186 186 HOH HOH . G 4 HOH A 54 187 187 HOH HOH . G 4 HOH A 55 188 188 HOH HOH . G 4 HOH A 56 189 189 HOH HOH . G 4 HOH A 57 190 190 HOH HOH . G 4 HOH A 58 191 191 HOH HOH . G 4 HOH A 59 192 192 HOH HOH . G 4 HOH A 60 193 193 HOH HOH . G 4 HOH A 61 194 194 HOH HOH . G 4 HOH A 62 195 195 HOH HOH . G 4 HOH A 63 196 196 HOH HOH . G 4 HOH A 64 197 197 HOH HOH . G 4 HOH A 65 198 198 HOH HOH . G 4 HOH A 66 199 199 HOH HOH . G 4 HOH A 67 200 200 HOH HOH . G 4 HOH A 68 201 201 HOH HOH . G 4 HOH A 69 202 202 HOH HOH . G 4 HOH A 70 203 203 HOH HOH . G 4 HOH A 71 204 204 HOH HOH . G 4 HOH A 72 205 205 HOH HOH . G 4 HOH A 73 206 206 HOH HOH . G 4 HOH A 74 207 207 HOH HOH . G 4 HOH A 75 208 208 HOH HOH . G 4 HOH A 76 209 209 HOH HOH . G 4 HOH A 77 210 210 HOH HOH . G 4 HOH A 78 211 211 HOH HOH . G 4 HOH A 79 212 212 HOH HOH . G 4 HOH A 80 213 213 HOH HOH . G 4 HOH A 81 214 214 HOH HOH . G 4 HOH A 82 215 215 HOH HOH . G 4 HOH A 83 216 216 HOH HOH . G 4 HOH A 84 217 217 HOH HOH . G 4 HOH A 85 218 218 HOH HOH . G 4 HOH A 86 219 219 HOH HOH . G 4 HOH A 87 220 220 HOH HOH . G 4 HOH A 88 221 221 HOH HOH . G 4 HOH A 89 222 222 HOH HOH . G 4 HOH A 90 223 223 HOH HOH . G 4 HOH A 91 224 3 HOH HOH . G 4 HOH A 92 225 4 HOH HOH . G 4 HOH A 93 226 42 HOH HOH . G 4 HOH A 94 227 43 HOH HOH . G 4 HOH A 95 228 44 HOH HOH . G 4 HOH A 96 229 45 HOH HOH . G 4 HOH A 97 230 47 HOH HOH . G 4 HOH A 98 231 48 HOH HOH . G 4 HOH A 99 232 49 HOH HOH . G 4 HOH A 100 233 50 HOH HOH . G 4 HOH A 101 234 51 HOH HOH . G 4 HOH A 102 235 52 HOH HOH . G 4 HOH A 103 236 53 HOH HOH . G 4 HOH A 104 237 54 HOH HOH . G 4 HOH A 105 238 55 HOH HOH . G 4 HOH A 106 239 56 HOH HOH . G 4 HOH A 107 240 57 HOH HOH . G 4 HOH A 108 241 58 HOH HOH . G 4 HOH A 109 242 59 HOH HOH . G 4 HOH A 110 243 60 HOH HOH . G 4 HOH A 111 244 61 HOH HOH . G 4 HOH A 112 245 62 HOH HOH . G 4 HOH A 113 246 63 HOH HOH . G 4 HOH A 114 247 64 HOH HOH . G 4 HOH A 115 248 65 HOH HOH . G 4 HOH A 116 249 66 HOH HOH . G 4 HOH A 117 250 67 HOH HOH . G 4 HOH A 118 251 68 HOH HOH . G 4 HOH A 119 252 69 HOH HOH . G 4 HOH A 120 253 70 HOH HOH . G 4 HOH A 121 254 71 HOH HOH . G 4 HOH A 122 255 72 HOH HOH . G 4 HOH A 123 256 73 HOH HOH . G 4 HOH A 124 257 74 HOH HOH . G 4 HOH A 125 258 75 HOH HOH . G 4 HOH A 126 259 76 HOH HOH . G 4 HOH A 127 260 77 HOH HOH . G 4 HOH A 128 261 79 HOH HOH . G 4 HOH A 129 262 80 HOH HOH . G 4 HOH A 130 263 81 HOH HOH . G 4 HOH A 131 264 82 HOH HOH . G 4 HOH A 132 265 83 HOH HOH . G 4 HOH A 133 266 84 HOH HOH . G 4 HOH A 134 267 85 HOH HOH . G 4 HOH A 135 268 86 HOH HOH . G 4 HOH A 136 269 87 HOH HOH . G 4 HOH A 137 270 88 HOH HOH . G 4 HOH A 138 271 89 HOH HOH . G 4 HOH A 139 272 90 HOH HOH . G 4 HOH A 140 273 91 HOH HOH . G 4 HOH A 141 274 92 HOH HOH . G 4 HOH A 142 275 93 HOH HOH . G 4 HOH A 143 276 94 HOH HOH . G 4 HOH A 144 277 95 HOH HOH . G 4 HOH A 145 278 96 HOH HOH . G 4 HOH A 146 279 97 HOH HOH . G 4 HOH A 147 280 98 HOH HOH . G 4 HOH A 148 281 99 HOH HOH . G 4 HOH A 149 282 100 HOH HOH . G 4 HOH A 150 283 101 HOH HOH . G 4 HOH A 151 284 102 HOH HOH . G 4 HOH A 152 285 103 HOH HOH . G 4 HOH A 153 286 104 HOH HOH . G 4 HOH A 154 287 105 HOH HOH . G 4 HOH A 155 288 106 HOH HOH . G 4 HOH A 156 289 107 HOH HOH . G 4 HOH A 157 290 108 HOH HOH . G 4 HOH A 158 291 109 HOH HOH . G 4 HOH A 159 292 110 HOH HOH . G 4 HOH A 160 293 111 HOH HOH . G 4 HOH A 161 294 112 HOH HOH . G 4 HOH A 162 295 113 HOH HOH . G 4 HOH A 163 296 114 HOH HOH . G 4 HOH A 164 297 115 HOH HOH . G 4 HOH A 165 298 116 HOH HOH . G 4 HOH A 166 299 117 HOH HOH . G 4 HOH A 167 300 118 HOH HOH . G 4 HOH A 168 301 119 HOH HOH . G 4 HOH A 169 302 120 HOH HOH . G 4 HOH A 170 303 121 HOH HOH . G 4 HOH A 171 304 122 HOH HOH . G 4 HOH A 172 305 123 HOH HOH . G 4 HOH A 173 306 124 HOH HOH . G 4 HOH A 174 307 125 HOH HOH . G 4 HOH A 175 308 126 HOH HOH . G 4 HOH A 176 309 127 HOH HOH . G 4 HOH A 177 310 128 HOH HOH . G 4 HOH A 178 311 129 HOH HOH . G 4 HOH A 179 312 130 HOH HOH . G 4 HOH A 180 313 131 HOH HOH . G 4 HOH A 181 314 132 HOH HOH . G 4 HOH A 182 315 133 HOH HOH . G 4 HOH A 183 316 134 HOH HOH . G 4 HOH A 184 317 136 HOH HOH . G 4 HOH A 185 318 137 HOH HOH . G 4 HOH A 186 319 138 HOH HOH . G 4 HOH A 187 320 139 HOH HOH . G 4 HOH A 188 321 140 HOH HOH . G 4 HOH A 189 322 141 HOH HOH . G 4 HOH A 190 323 142 HOH HOH . G 4 HOH A 191 324 143 HOH HOH . G 4 HOH A 192 325 144 HOH HOH . G 4 HOH A 193 326 145 HOH HOH . G 4 HOH A 194 327 146 HOH HOH . G 4 HOH A 195 328 147 HOH HOH . G 4 HOH A 196 329 148 HOH HOH . G 4 HOH A 197 330 149 HOH HOH . G 4 HOH A 198 331 150 HOH HOH . G 4 HOH A 199 332 151 HOH HOH . G 4 HOH A 200 333 152 HOH HOH . G 4 HOH A 201 334 153 HOH HOH . G 4 HOH A 202 335 154 HOH HOH . G 4 HOH A 203 336 155 HOH HOH . G 4 HOH A 204 337 156 HOH HOH . G 4 HOH A 205 338 157 HOH HOH . G 4 HOH A 206 339 158 HOH HOH . G 4 HOH A 207 340 159 HOH HOH . G 4 HOH A 208 341 160 HOH HOH . G 4 HOH A 209 342 162 HOH HOH . G 4 HOH A 210 343 163 HOH HOH . G 4 HOH A 211 344 164 HOH HOH . G 4 HOH A 212 345 165 HOH HOH . G 4 HOH A 213 346 166 HOH HOH . G 4 HOH A 214 347 167 HOH HOH . G 4 HOH A 215 348 168 HOH HOH . G 4 HOH A 216 349 169 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAS 08H . . . B 2 29.121 15.727 -1.182 1 5.89 ? CAS 08H 1 A 1 HETATM 2 C CAJ 08H . . . B 2 27.843 15.159 -1.053 1 5.64 ? CAJ 08H 1 A 1 HETATM 3 C CAP 08H . . . B 2 27.286 15.083 0.217 1 6.47 ? CAP 08H 1 A 1 HETATM 4 CL CLAB 08H . . . B 2 25.701 14.389 0.432 1 14.63 ? CLAB 08H 1 A 1 HETATM 5 C CAH 08H . . . B 2 27.915 15.578 1.366 1 5.45 ? CAH 08H 1 A 1 HETATM 6 C CAI 08H . . . B 2 29.192 16.15 1.224 1 4.26 ? CAI 08H 1 A 1 HETATM 7 C CAU 08H . . . B 2 29.763 16.23 -0.04 1 5.86 ? CAU 08H 1 A 1 HETATM 8 N NAV 08H . . . B 2 31.023 16.81 -0.046 1 6.15 ? NAV 08H 1 A 1 HETATM 9 C CAR 08H . . . B 2 31.533 17.872 0.633 1 6.24 ? CAR 08H 1 A 1 HETATM 10 C CAA 08H . . . B 2 30.806 18.822 1.603 1 8.02 ? CAA 08H 1 A 1 HETATM 11 N NAM 08H . . . B 2 32.815 18.037 0.299 1 6.83 ? NAM 08H 1 A 1 HETATM 12 N NAN 08H . . . B 2 33.151 17.112 -0.526 1 7.37 ? NAN 08H 1 A 1 HETATM 13 C CAT 08H . . . B 2 32.058 16.349 -0.758 1 7.06 ? CAT 08H 1 A 1 HETATM 14 C CAK 08H . . . B 2 31.956 15.215 -1.73 1 8.15 ? CAK 08H 1 A 1 HETATM 15 N NAL 08H . . . B 2 30.979 15.691 -2.746 1 10.31 ? NAL 08H 1 A 1 HETATM 16 C CAO 08H . . . B 2 29.651 15.777 -2.509 1 6.71 ? CAO 08H 1 A 1 HETATM 17 C CAQ 08H . . . B 2 28.859 16.264 -3.614 1 6.14 ? CAQ 08H 1 A 1 HETATM 18 C CAF 08H . . . B 2 27.692 16.991 -3.398 1 6.66 ? CAF 08H 1 A 1 HETATM 19 C CAD 08H . . . B 2 26.958 17.533 -4.455 1 9.08 ? CAD 08H 1 A 1 HETATM 20 C CAC 08H . . . B 2 27.343 17.328 -5.777 1 9 ? CAC 08H 1 A 1 HETATM 21 C CAE 08H . . . B 2 28.491 16.593 -5.996 1 9.48 ? CAE 08H 1 A 1 HETATM 22 C CAG 08H . . . B 2 29.227 16.066 -4.939 1 8.57 ? CAG 08H 1 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 22 #