data_3U5V # _model_server_result.job_id 0K4mIkV0vu_eofx8vDmxXw _model_server_result.datetime_utc '2024-11-04 23:03:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3u5v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":700}' # _entry.id 3U5V # _exptl.entry_id 3U5V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3U5V _cell.length_a 37.48 _cell.length_b 49.466 _cell.length_c 74.1 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3U5V _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-y+1/2,z -1 0 0 0 -1 0 0 0 1 0 24.733 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 237 n n N O2 NO3 sing 238 n n N O3 NO3 sing 239 n n # _atom_sites.entry_id 3U5V _atom_sites.fract_transf_matrix[1][1] 0.026681 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020216 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013495 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 700 700 NO3 NO3 . C 2 NO3 A 1 701 701 NO3 NO3 . D 3 HOH A 1 75 1 HOH HOH . D 3 HOH A 2 76 2 HOH HOH . D 3 HOH A 3 77 3 HOH HOH . D 3 HOH A 4 78 4 HOH HOH . D 3 HOH A 5 79 5 HOH HOH . D 3 HOH A 6 80 6 HOH HOH . D 3 HOH A 7 81 7 HOH HOH . D 3 HOH A 8 82 8 HOH HOH . D 3 HOH A 9 83 9 HOH HOH . D 3 HOH A 10 84 10 HOH HOH . D 3 HOH A 11 85 11 HOH HOH . D 3 HOH A 12 86 12 HOH HOH . D 3 HOH A 13 87 13 HOH HOH . D 3 HOH A 14 88 14 HOH HOH . D 3 HOH A 15 89 15 HOH HOH . D 3 HOH A 16 90 16 HOH HOH . D 3 HOH A 17 91 17 HOH HOH . D 3 HOH A 18 92 18 HOH HOH . D 3 HOH A 19 93 19 HOH HOH . D 3 HOH A 20 94 20 HOH HOH . D 3 HOH A 21 95 21 HOH HOH . D 3 HOH A 22 96 22 HOH HOH . D 3 HOH A 23 97 23 HOH HOH . D 3 HOH A 24 98 24 HOH HOH . D 3 HOH A 25 99 25 HOH HOH . D 3 HOH A 26 100 26 HOH HOH . D 3 HOH A 27 101 27 HOH HOH . D 3 HOH A 28 102 28 HOH HOH . D 3 HOH A 29 103 29 HOH HOH . D 3 HOH A 30 104 30 HOH HOH . D 3 HOH A 31 105 31 HOH HOH . D 3 HOH A 32 106 32 HOH HOH . D 3 HOH A 33 107 33 HOH HOH . D 3 HOH A 34 108 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . B 2 -17.396 4.725 -22.517 1 30.6 ? N NO3 700 A 1 HETATM 2 O O1 NO3 . . . B 2 -18.01 4.034 -23.565 1 31.76 ? O1 NO3 700 A 1 HETATM 3 O O2 NO3 . . . B 2 -16.396 5.666 -22.782 1 36.28 ? O2 NO3 700 A 1 HETATM 4 O O3 NO3 . . . B 2 -17.786 4.477 -21.199 1 25.87 ? O3 NO3 700 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #