data_3U6K # _model_server_result.job_id 83orBqpnLV-XmFDFr4Kxgg _model_server_result.datetime_utc '2024-11-01 11:34:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3u6k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":500}' # _entry.id 3U6K # _exptl.entry_id 3U6K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3U6K _cell.length_a 80.372 _cell.length_b 82.216 _cell.length_c 129.9 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3U6K _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,I,K 1 1 B,D,G,H,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C SER 1 C SER 1 1_555 C N BB9 2 C BB9 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.364 sing covale ? covale2 C C SER 1 C SER 1 1_555 C SG BB9 2 C BB9 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.732 sing covale ? covale3 C CA SER 1 C SER 1 1_555 C C BB9 10 C BB9 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.42 sing covale ? covale4 C CB SER 1 C SER 1 1_555 C CB MH6 11 C MH6 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 sing covale ? covale5 C C BB9 2 C BB9 2 1_555 C N MEN 3 C MEN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 sing covale ? covale6 C C MEN 3 C MEN 3 1_555 C SG BB6 4 C BB6 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.751 sing covale ? covale7 C C MEN 3 C MEN 3 1_555 C N BB6 4 C BB6 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 sing covale ? covale8 C C BB6 4 C BB6 4 1_555 C N VAL 5 C VAL 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 sing covale ? covale9 C C VAL 5 C VAL 5 1_555 C SG BB7 6 C BB7 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.749 sing covale ? covale10 C C VAL 5 C VAL 5 1_555 C N BB7 6 C BB7 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 sing covale ? covale11 C C BB7 6 C BB7 6 1_555 C N GLY 7 C GLY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 sing covale ? covale12 C C GLY 7 C GLY 7 1_555 C N BB8 8 C BB8 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 sing covale ? covale13 C C BB8 8 C BB8 8 1_555 C N BB9 9 C BB9 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.309 sing covale ? covale14 C C BB8 8 C BB8 8 1_555 C SG BB9 9 C BB9 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.775 sing covale ? covale15 C C BB9 9 C BB9 9 1_555 C N BB9 10 C BB9 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 sing covale ? covale16 C C BB9 9 C BB9 9 1_555 C SG BB9 10 C BB9 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 sing covale ? covale17 C C BB9 10 C BB9 10 1_555 C N MH6 11 C MH6 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 sing covale ? covale18 C C MH6 11 C MH6 11 1_555 C N 9BB 12 C 9BB 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 sing covale ? covale19 C C MH6 11 C MH6 11 1_555 C SG 9BB 12 C 9BB 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.775 sing covale ? covale20 D C SER 1 D SER 1 1_555 D N BB9 2 D BB9 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 sing covale ? covale21 D C SER 1 D SER 1 1_555 D SG BB9 2 D BB9 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.747 sing covale ? covale22 D CA SER 1 D SER 1 1_555 D C BB9 10 D BB9 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.405 sing covale ? covale23 D CB SER 1 D SER 1 1_555 D CB MH6 11 D MH6 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.409 sing covale ? covale24 D C BB9 2 D BB9 2 1_555 D N MEN 3 D MEN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 sing covale ? covale25 D C MEN 3 D MEN 3 1_555 D SG BB6 4 D BB6 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.755 sing covale ? covale26 D C MEN 3 D MEN 3 1_555 D N BB6 4 D BB6 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 sing covale ? covale27 D C BB6 4 D BB6 4 1_555 D N VAL 5 D VAL 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 sing covale ? covale28 D C VAL 5 D VAL 5 1_555 D SG BB7 6 D BB7 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.755 sing covale ? covale29 D C VAL 5 D VAL 5 1_555 D N BB7 6 D BB7 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 sing covale ? covale30 D C BB7 6 D BB7 6 1_555 D N GLY 7 D GLY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 sing covale ? covale31 D C GLY 7 D GLY 7 1_555 D N BB8 8 D BB8 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 sing covale ? covale32 D C BB8 8 D BB8 8 1_555 D N BB9 9 D BB9 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 sing covale ? covale33 D C BB8 8 D BB8 8 1_555 D SG BB9 9 D BB9 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.79 sing covale ? covale34 D C BB9 9 D BB9 9 1_555 D N BB9 10 D BB9 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 sing covale ? covale35 D C BB9 9 D BB9 9 1_555 D SG BB9 10 D BB9 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.762 sing covale ? covale36 D C BB9 10 D BB9 10 1_555 D N MH6 11 D MH6 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 sing covale ? covale37 D C MH6 11 D MH6 11 1_555 D N 9BB 12 D 9BB 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 sing covale ? covale38 D C MH6 11 D MH6 11 1_555 D SG 9BB 12 D 9BB 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 sing metalc ? metalc1 A OG1 THR 26 A THR 25 1_555 F MG MG . A MG 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc2 F MG MG . A MG 394 1_555 I O HOH . A HOH 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc3 F MG MG . A MG 394 1_555 I O HOH . A HOH 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc4 F MG MG . A MG 394 1_555 I O HOH . A HOH 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? metalc ? metalc5 F MG MG . A MG 394 1_555 I O HOH . A HOH 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc6 F MG MG . A MG 394 1_555 E O3B GDP . A GDP 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc7 B OG1 THR 26 B THR 25 1_555 H MG MG . B MG 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc8 H MG MG . B MG 394 1_555 J O HOH . B HOH 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc9 H MG MG . B MG 394 1_555 J O HOH . B HOH 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc10 H MG MG . B MG 394 1_555 J O HOH . B HOH 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc11 H MG MG . B MG 394 1_555 J O HOH . B HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc12 H MG MG . B MG 394 1_555 G O3B GDP . B GDP 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 183 n n PB O2B GDP sing 184 n n PB O3B GDP sing 185 n n PB O3A GDP sing 186 n n O2B HOB2 GDP sing 187 n n O3B HOB3 GDP sing 188 n n O3A PA GDP sing 189 n n PA O1A GDP doub 190 n n PA O2A GDP sing 191 n n PA O5' GDP sing 192 n n O2A HOA2 GDP sing 193 n n O5' C5' GDP sing 194 n n C5' C4' GDP sing 195 n n C5' H5' GDP sing 196 n n C5' "H5''" GDP sing 197 n n C4' O4' GDP sing 198 n n C4' C3' GDP sing 199 n n C4' H4' GDP sing 200 n n O4' C1' GDP sing 201 n n C3' O3' GDP sing 202 n n C3' C2' GDP sing 203 n n C3' H3' GDP sing 204 n n O3' HO3' GDP sing 205 n n C2' O2' GDP sing 206 n n C2' C1' GDP sing 207 n n C2' H2' GDP sing 208 n n O2' HO2' GDP sing 209 n n C1' N9 GDP sing 210 n n C1' H1' GDP sing 211 n n N9 C8 GDP sing 212 n y N9 C4 GDP sing 213 n y C8 N7 GDP doub 214 n y C8 H8 GDP sing 215 n n N7 C5 GDP sing 216 n y C5 C6 GDP sing 217 n n C5 C4 GDP doub 218 n y C6 O6 GDP doub 219 n n C6 N1 GDP sing 220 n n N1 C2 GDP sing 221 n n N1 HN1 GDP sing 222 n n C2 N2 GDP sing 223 n n C2 N3 GDP doub 224 n n N2 HN21 GDP sing 225 n n N2 HN22 GDP sing 226 n n N3 C4 GDP sing 227 n n # _atom_sites.entry_id 3U6K _atom_sites.fract_transf_matrix[1][1] 0.012442 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012163 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007698 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GDP A 1 500 500 GDP GDP . F 4 MG A 1 394 1 MG MG . G 3 GDP B 1 500 500 GDP GDP . H 4 MG B 1 394 1 MG MG . I 5 HOH A 1 395 11 HOH HOH . I 5 HOH A 2 396 12 HOH HOH . I 5 HOH A 3 397 13 HOH HOH . I 5 HOH A 4 398 14 HOH HOH . I 5 HOH A 5 399 15 HOH HOH . I 5 HOH A 6 400 16 HOH HOH . I 5 HOH A 7 401 17 HOH HOH . I 5 HOH A 8 402 19 HOH HOH . I 5 HOH A 9 403 20 HOH HOH . I 5 HOH A 10 404 21 HOH HOH . I 5 HOH A 11 405 22 HOH HOH . I 5 HOH A 12 406 23 HOH HOH . I 5 HOH A 13 407 24 HOH HOH . I 5 HOH A 14 408 25 HOH HOH . I 5 HOH A 15 409 26 HOH HOH . I 5 HOH A 16 410 27 HOH HOH . I 5 HOH A 17 411 28 HOH HOH . I 5 HOH A 18 412 29 HOH HOH . I 5 HOH A 19 413 30 HOH HOH . I 5 HOH A 20 414 31 HOH HOH . I 5 HOH A 21 415 32 HOH HOH . I 5 HOH A 22 416 33 HOH HOH . I 5 HOH A 23 417 34 HOH HOH . I 5 HOH A 24 418 35 HOH HOH . I 5 HOH A 25 419 37 HOH HOH . I 5 HOH A 26 420 38 HOH HOH . I 5 HOH A 27 421 39 HOH HOH . I 5 HOH A 28 422 40 HOH HOH . I 5 HOH A 29 423 41 HOH HOH . I 5 HOH A 30 424 42 HOH HOH . I 5 HOH A 31 425 43 HOH HOH . I 5 HOH A 32 426 44 HOH HOH . I 5 HOH A 33 427 45 HOH HOH . I 5 HOH A 34 428 46 HOH HOH . I 5 HOH A 35 429 47 HOH HOH . I 5 HOH A 36 430 48 HOH HOH . I 5 HOH A 37 431 49 HOH HOH . I 5 HOH A 38 432 50 HOH HOH . I 5 HOH A 39 433 51 HOH HOH . I 5 HOH A 40 434 52 HOH HOH . I 5 HOH A 41 435 53 HOH HOH . I 5 HOH A 42 436 54 HOH HOH . I 5 HOH A 43 437 55 HOH HOH . I 5 HOH A 44 438 56 HOH HOH . I 5 HOH A 45 439 57 HOH HOH . I 5 HOH A 46 440 84 HOH HOH . I 5 HOH A 47 441 105 HOH HOH . I 5 HOH A 48 442 106 HOH HOH . I 5 HOH A 49 443 107 HOH HOH . I 5 HOH A 50 444 108 HOH HOH . I 5 HOH A 51 445 112 HOH HOH . I 5 HOH A 52 446 114 HOH HOH . I 5 HOH A 53 447 115 HOH HOH . I 5 HOH A 54 448 117 HOH HOH . I 5 HOH A 55 449 118 HOH HOH . I 5 HOH A 56 450 122 HOH HOH . I 5 HOH A 57 451 124 HOH HOH . I 5 HOH A 58 452 126 HOH HOH . I 5 HOH A 59 453 127 HOH HOH . I 5 HOH A 60 454 128 HOH HOH . I 5 HOH A 61 455 129 HOH HOH . I 5 HOH A 62 456 132 HOH HOH . I 5 HOH A 63 457 133 HOH HOH . I 5 HOH A 64 458 134 HOH HOH . I 5 HOH A 65 459 137 HOH HOH . I 5 HOH A 66 460 139 HOH HOH . I 5 HOH A 67 461 140 HOH HOH . I 5 HOH A 68 462 141 HOH HOH . I 5 HOH A 69 463 142 HOH HOH . J 5 HOH B 1 395 1 HOH HOH . J 5 HOH B 2 396 2 HOH HOH . J 5 HOH B 3 397 3 HOH HOH . J 5 HOH B 4 398 4 HOH HOH . J 5 HOH B 5 399 6 HOH HOH . J 5 HOH B 6 400 8 HOH HOH . J 5 HOH B 7 401 9 HOH HOH . J 5 HOH B 8 402 10 HOH HOH . J 5 HOH B 9 403 58 HOH HOH . J 5 HOH B 10 404 59 HOH HOH . J 5 HOH B 11 405 60 HOH HOH . J 5 HOH B 12 406 61 HOH HOH . J 5 HOH B 13 407 62 HOH HOH . J 5 HOH B 14 408 63 HOH HOH . J 5 HOH B 15 409 64 HOH HOH . J 5 HOH B 16 410 65 HOH HOH . J 5 HOH B 17 411 66 HOH HOH . J 5 HOH B 18 412 67 HOH HOH . J 5 HOH B 19 413 68 HOH HOH . J 5 HOH B 20 414 69 HOH HOH . J 5 HOH B 21 415 70 HOH HOH . J 5 HOH B 22 416 71 HOH HOH . J 5 HOH B 23 417 72 HOH HOH . J 5 HOH B 24 418 73 HOH HOH . J 5 HOH B 25 419 74 HOH HOH . J 5 HOH B 26 420 75 HOH HOH . J 5 HOH B 27 421 76 HOH HOH . J 5 HOH B 28 422 77 HOH HOH . J 5 HOH B 29 423 78 HOH HOH . J 5 HOH B 30 424 79 HOH HOH . J 5 HOH B 31 425 80 HOH HOH . J 5 HOH B 32 426 81 HOH HOH . J 5 HOH B 33 427 82 HOH HOH . J 5 HOH B 34 428 83 HOH HOH . J 5 HOH B 35 429 85 HOH HOH . J 5 HOH B 36 430 86 HOH HOH . J 5 HOH B 37 431 87 HOH HOH . J 5 HOH B 38 432 88 HOH HOH . J 5 HOH B 39 433 89 HOH HOH . J 5 HOH B 40 434 90 HOH HOH . J 5 HOH B 41 435 91 HOH HOH . J 5 HOH B 42 436 92 HOH HOH . J 5 HOH B 43 437 93 HOH HOH . J 5 HOH B 44 438 94 HOH HOH . J 5 HOH B 45 439 95 HOH HOH . J 5 HOH B 46 440 96 HOH HOH . J 5 HOH B 47 441 97 HOH HOH . J 5 HOH B 48 442 98 HOH HOH . J 5 HOH B 49 443 99 HOH HOH . J 5 HOH B 50 444 100 HOH HOH . J 5 HOH B 51 445 101 HOH HOH . J 5 HOH B 52 446 102 HOH HOH . J 5 HOH B 53 447 103 HOH HOH . J 5 HOH B 54 448 104 HOH HOH . J 5 HOH B 55 449 109 HOH HOH . J 5 HOH B 56 450 110 HOH HOH . J 5 HOH B 57 451 111 HOH HOH . J 5 HOH B 58 452 113 HOH HOH . J 5 HOH B 59 453 116 HOH HOH . J 5 HOH B 60 454 119 HOH HOH . J 5 HOH B 61 455 120 HOH HOH . J 5 HOH B 62 456 121 HOH HOH . J 5 HOH B 63 457 123 HOH HOH . J 5 HOH B 64 458 125 HOH HOH . J 5 HOH B 65 459 130 HOH HOH . J 5 HOH B 66 460 131 HOH HOH . J 5 HOH B 67 461 135 HOH HOH . J 5 HOH B 68 462 136 HOH HOH . J 5 HOH B 69 463 138 HOH HOH . J 5 HOH B 70 464 144 HOH HOH . J 5 HOH B 71 465 145 HOH HOH . J 5 HOH B 72 466 146 HOH HOH . K 5 HOH C 1 18 18 HOH HOH . L 5 HOH D 1 13 5 HOH HOH . L 5 HOH D 2 14 7 HOH HOH . L 5 HOH D 3 143 143 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . G 3 24.686 53.385 -3.488 1 43.18 ? PB GDP 500 B 1 HETATM 2 O O1B GDP . . . G 3 25.267 54.369 -2.428 1 45.19 ? O1B GDP 500 B 1 HETATM 3 O O2B GDP . . . G 3 25.335 51.99 -3.327 1 39.81 ? O2B GDP 500 B 1 HETATM 4 O O3B GDP . . . G 3 23.206 53.292 -3.375 1 41.79 ? O3B GDP 500 B 1 HETATM 5 O O3A GDP . . . G 3 25.149 54.02 -4.833 1 45.66 ? O3A GDP 500 B 1 HETATM 6 P PA GDP . . . G 3 24.415 54.662 -6.04 1 48.87 ? PA GDP 500 B 1 HETATM 7 O O1A GDP . . . G 3 23.351 53.774 -6.608 1 49.07 ? O1A GDP 500 B 1 HETATM 8 O O2A GDP . . . G 3 23.837 55.999 -5.526 1 47.29 ? O2A GDP 500 B 1 HETATM 9 O O5' GDP . . . G 3 25.441 55.155 -7.114 1 52.58 ? O5' GDP 500 B 1 HETATM 10 C C5' GDP . . . G 3 26.527 56.029 -6.662 1 54.53 ? C5' GDP 500 B 1 HETATM 11 C C4' GDP . . . G 3 27.441 56.534 -7.801 1 57.38 ? C4' GDP 500 B 1 HETATM 12 O O4' GDP . . . G 3 27.857 55.537 -8.763 1 57.54 ? O4' GDP 500 B 1 HETATM 13 C C3' GDP . . . G 3 26.798 57.71 -8.583 1 59.47 ? C3' GDP 500 B 1 HETATM 14 O O3' GDP . . . G 3 27.733 58.8 -8.735 1 60.91 ? O3' GDP 500 B 1 HETATM 15 C C2' GDP . . . G 3 26.419 57.086 -9.915 1 60.25 ? C2' GDP 500 B 1 HETATM 16 O O2' GDP . . . G 3 26.562 57.941 -11.052 1 63.14 ? O2' GDP 500 B 1 HETATM 17 C C1' GDP . . . G 3 27.303 55.869 -10.029 1 60.17 ? C1' GDP 500 B 1 HETATM 18 N N9 GDP . . . G 3 26.442 54.902 -10.697 1 62.22 ? N9 GDP 500 B 1 HETATM 19 C C8 GDP . . . G 3 25.739 53.774 -10.193 1 63.93 ? C8 GDP 500 B 1 HETATM 20 N N7 GDP . . . G 3 25.911 52.614 -10.862 1 64.11 ? N7 GDP 500 B 1 HETATM 21 C C5 GDP . . . G 3 26.858 52.988 -11.921 1 64.35 ? C5 GDP 500 B 1 HETATM 22 C C6 GDP . . . G 3 27.493 52.213 -13.017 1 63.8 ? C6 GDP 500 B 1 HETATM 23 O O6 GDP . . . G 3 27.191 51.044 -13.174 1 63.93 ? O6 GDP 500 B 1 HETATM 24 N N1 GDP . . . G 3 28.403 52.877 -13.799 1 63.76 ? N1 GDP 500 B 1 HETATM 25 C C2 GDP . . . G 3 28.754 54.203 -13.656 1 62.95 ? C2 GDP 500 B 1 HETATM 26 N N2 GDP . . . G 3 29.654 54.75 -14.465 1 62.35 ? N2 GDP 500 B 1 HETATM 27 N N3 GDP . . . G 3 28.159 54.946 -12.677 1 62.57 ? N3 GDP 500 B 1 HETATM 28 C C4 GDP . . . G 3 27.166 54.291 -11.794 1 63.7 ? C4 GDP 500 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #