data_3U7L
#
_model_server_result.job_id            g_cjBN4RbQlS4gcmSKEhxQ 
_model_server_result.datetime_utc      '2024-11-22 20:57:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3u7l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":192}' 
#
_entry.id    3U7L 
#
_exptl.entry_id    3U7L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              440.484 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (S)-N-(cyclopentylmethyl)-2-(3-(3,5-difluorophenyl)ureido)-N-(2-(hydroxyamino)-2-oxoethyl)-3,3-dimethylbutanamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3U7L 
_cell.length_a            94.781 
_cell.length_b            120.209 
_cell.length_c            47.786 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3U7L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 110 A GLY 110 1_555 A N CSD 111 A CSD 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale2 A C CSD 111 A CSD 111 1_555 A N LEU 112 A LEU 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
metalc ? metalc1 A SG CSD 111 A CSD 111 1_555 B ZN ZN . A ZN 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc2 A NE2 HIS 154 A HIS 154 1_555 B ZN ZN . A ZN 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
metalc ? metalc3 A NE2 HIS 158 A HIS 158 1_555 B ZN ZN . A ZN 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc4 C OAX UDB . A UDB 192 1_555 B ZN ZN . A ZN 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? 
#
_chem_comp.formula           'C21 H30 F2 N4 O4' 
_chem_comp.formula_weight    440.484 
_chem_comp.id                UDB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (S)-N-(cyclopentylmethyl)-2-(3-(3,5-difluorophenyl)ureido)-N-(2-(hydroxyamino)-2-oxoethyl)-3,3-dimethylbutanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O UDB doub 332 n n 
C CA UDB sing 333 n n 
C NAS UDB sing 334 n n 
N CA UDB sing 335 n n 
N CAG UDB sing 336 n n 
F1 CAL UDB sing 337 n n 
F2 CAN UDB sing 338 n n 
CA CB UDB sing 339 n n 
CB CAA UDB sing 340 n n 
CB CAC UDB sing 341 n n 
CB CAD UDB sing 342 n n 
CAG OAH UDB doub 343 n n 
CAG NAI UDB sing 344 n n 
NAI CAJ UDB sing 345 n n 
CAJ CAK UDB doub 346 n y 
CAJ CAP UDB sing 347 n y 
CAK CAL UDB sing 348 n y 
CAL CAM UDB doub 349 n y 
CAM CAN UDB sing 350 n y 
CAN CAP UDB doub 351 n y 
NAS CAT UDB sing 352 n n 
NAS CAY UDB sing 353 n n 
CAT CAU UDB sing 354 n n 
CAU OAV UDB doub 355 n n 
CAU NAW UDB sing 356 n n 
NAW OAX UDB sing 357 n n 
CAY CAZ UDB sing 358 n n 
CAZ CBA UDB sing 359 n n 
CAZ CBD UDB sing 360 n n 
CBA CBB UDB sing 361 n n 
CBB CBC UDB sing 362 n n 
CBC CBD UDB sing 363 n n 
N HN UDB sing 364 n n 
CA HA UDB sing 365 n n 
CAA HAA UDB sing 366 n n 
CAA HAAA UDB sing 367 n n 
CAA HAAB UDB sing 368 n n 
CAC HAC UDB sing 369 n n 
CAC HACA UDB sing 370 n n 
CAC HACB UDB sing 371 n n 
CAD HAD UDB sing 372 n n 
CAD HADA UDB sing 373 n n 
CAD HADB UDB sing 374 n n 
NAI HNAI UDB sing 375 n n 
CAK HAK UDB sing 376 n n 
CAM HAM UDB sing 377 n n 
CAP HAP UDB sing 378 n n 
CAT HAT UDB sing 379 n n 
CAT HATA UDB sing 380 n n 
NAW HNAW UDB sing 381 n n 
OAX HOAX UDB sing 382 n n 
CAY HAY UDB sing 383 n n 
CAY HAYA UDB sing 384 n n 
CAZ HAZ UDB sing 385 n n 
CBA HBA UDB sing 386 n n 
CBA HBAA UDB sing 387 n n 
CBB HBB UDB sing 388 n n 
CBB HBBA UDB sing 389 n n 
CBC HBC UDB sing 390 n n 
CBC HBCA UDB sing 391 n n 
CBD HBD UDB sing 392 n n 
CBD HBDA UDB sing 393 n n 
#
_atom_sites.entry_id                     3U7L 
_atom_sites.fract_transf_matrix[1][1]    0.010551 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008319 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020927 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 350 350 ZN ZN2 . 
C 3 UDB A 1 192 1 UDB DRG . 
D 4 HOH A 1 193 1 HOH HOH . 
D 4 HOH A 2 194 2 HOH HOH . 
D 4 HOH A 3 195 3 HOH HOH . 
D 4 HOH A 4 196 4 HOH HOH . 
D 4 HOH A 5 197 5 HOH HOH . 
D 4 HOH A 6 198 6 HOH HOH . 
D 4 HOH A 7 199 7 HOH HOH . 
D 4 HOH A 8 200 8 HOH HOH . 
D 4 HOH A 9 201 9 HOH HOH . 
D 4 HOH A 10 202 10 HOH HOH . 
D 4 HOH A 11 203 11 HOH HOH . 
D 4 HOH A 12 204 12 HOH HOH . 
D 4 HOH A 13 205 13 HOH HOH . 
D 4 HOH A 14 206 14 HOH HOH . 
D 4 HOH A 15 207 15 HOH HOH . 
D 4 HOH A 16 208 16 HOH HOH . 
D 4 HOH A 17 209 17 HOH HOH . 
D 4 HOH A 18 210 18 HOH HOH . 
D 4 HOH A 19 211 19 HOH HOH . 
D 4 HOH A 20 212 20 HOH HOH . 
D 4 HOH A 21 213 21 HOH HOH . 
D 4 HOH A 22 214 22 HOH HOH . 
D 4 HOH A 23 215 23 HOH HOH . 
D 4 HOH A 24 216 24 HOH HOH . 
D 4 HOH A 25 217 25 HOH HOH . 
D 4 HOH A 26 218 26 HOH HOH . 
D 4 HOH A 27 219 27 HOH HOH . 
D 4 HOH A 28 220 28 HOH HOH . 
D 4 HOH A 29 221 29 HOH HOH . 
D 4 HOH A 30 222 31 HOH HOH . 
D 4 HOH A 31 223 32 HOH HOH . 
D 4 HOH A 32 224 33 HOH HOH . 
D 4 HOH A 33 225 34 HOH HOH . 
D 4 HOH A 34 226 35 HOH HOH . 
D 4 HOH A 35 227 36 HOH HOH . 
D 4 HOH A 36 228 37 HOH HOH . 
D 4 HOH A 37 229 38 HOH HOH . 
D 4 HOH A 38 230 39 HOH HOH . 
D 4 HOH A 39 231 40 HOH HOH . 
D 4 HOH A 40 232 41 HOH HOH . 
D 4 HOH A 41 233 42 HOH HOH . 
D 4 HOH A 42 234 43 HOH HOH . 
D 4 HOH A 43 235 44 HOH HOH . 
D 4 HOH A 44 236 45 HOH HOH . 
D 4 HOH A 45 237 46 HOH HOH . 
D 4 HOH A 46 238 47 HOH HOH . 
D 4 HOH A 47 239 48 HOH HOH . 
D 4 HOH A 48 240 49 HOH HOH . 
D 4 HOH A 49 241 50 HOH HOH . 
D 4 HOH A 50 242 51 HOH HOH . 
D 4 HOH A 51 243 52 HOH HOH . 
D 4 HOH A 52 244 53 HOH HOH . 
D 4 HOH A 53 245 54 HOH HOH . 
D 4 HOH A 54 246 55 HOH HOH . 
D 4 HOH A 55 247 56 HOH HOH . 
D 4 HOH A 56 248 57 HOH HOH . 
D 4 HOH A 57 249 58 HOH HOH . 
D 4 HOH A 58 250 59 HOH HOH . 
D 4 HOH A 59 251 60 HOH HOH . 
D 4 HOH A 60 252 61 HOH HOH . 
D 4 HOH A 61 253 62 HOH HOH . 
D 4 HOH A 62 254 63 HOH HOH . 
D 4 HOH A 63 255 64 HOH HOH . 
D 4 HOH A 64 256 65 HOH HOH . 
D 4 HOH A 65 257 66 HOH HOH . 
D 4 HOH A 66 258 67 HOH HOH . 
D 4 HOH A 67 259 68 HOH HOH . 
D 4 HOH A 68 260 69 HOH HOH . 
D 4 HOH A 69 261 70 HOH HOH . 
D 4 HOH A 70 262 71 HOH HOH . 
D 4 HOH A 71 263 72 HOH HOH . 
D 4 HOH A 72 264 73 HOH HOH . 
D 4 HOH A 73 265 74 HOH HOH . 
D 4 HOH A 74 266 75 HOH HOH . 
D 4 HOH A 75 267 76 HOH HOH . 
D 4 HOH A 76 268 77 HOH HOH . 
D 4 HOH A 77 269 78 HOH HOH . 
D 4 HOH A 78 270 79 HOH HOH . 
D 4 HOH A 79 271 80 HOH HOH . 
D 4 HOH A 80 272 81 HOH HOH . 
D 4 HOH A 81 273 82 HOH HOH . 
D 4 HOH A 82 274 83 HOH HOH . 
D 4 HOH A 83 275 84 HOH HOH . 
D 4 HOH A 84 276 85 HOH HOH . 
D 4 HOH A 85 277 86 HOH HOH . 
D 4 HOH A 86 278 87 HOH HOH . 
D 4 HOH A 87 279 88 HOH HOH . 
D 4 HOH A 88 280 89 HOH HOH . 
D 4 HOH A 89 281 90 HOH HOH . 
D 4 HOH A 90 282 91 HOH HOH . 
D 4 HOH A 91 283 92 HOH HOH . 
D 4 HOH A 92 284 93 HOH HOH . 
D 4 HOH A 93 285 94 HOH HOH . 
D 4 HOH A 94 286 95 HOH HOH . 
D 4 HOH A 95 287 96 HOH HOH . 
D 4 HOH A 96 288 97 HOH HOH . 
D 4 HOH A 97 289 98 HOH HOH . 
D 4 HOH A 98 290 99 HOH HOH . 
D 4 HOH A 99 291 100 HOH HOH . 
D 4 HOH A 100 292 101 HOH HOH . 
D 4 HOH A 101 293 102 HOH HOH . 
D 4 HOH A 102 294 103 HOH HOH . 
D 4 HOH A 103 295 104 HOH HOH . 
D 4 HOH A 104 296 105 HOH HOH . 
D 4 HOH A 105 297 106 HOH HOH . 
D 4 HOH A 106 298 107 HOH HOH . 
D 4 HOH A 107 299 108 HOH HOH . 
D 4 HOH A 108 300 109 HOH HOH . 
D 4 HOH A 109 301 110 HOH HOH . 
D 4 HOH A 110 302 112 HOH HOH . 
D 4 HOH A 111 303 113 HOH HOH . 
D 4 HOH A 112 304 114 HOH HOH . 
D 4 HOH A 113 305 115 HOH HOH . 
D 4 HOH A 114 306 119 HOH HOH . 
D 4 HOH A 115 307 120 HOH HOH . 
D 4 HOH A 116 308 121 HOH HOH . 
D 4 HOH A 117 309 123 HOH HOH . 
D 4 HOH A 118 310 126 HOH HOH . 
D 4 HOH A 119 311 130 HOH HOH . 
D 4 HOH A 120 312 132 HOH HOH . 
D 4 HOH A 121 313 133 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C UDB . . . C 3 -16.874 144.923 44.958 1 28.43 ? C UDB 192 A 1 
HETATM 2 N N UDB . . . C 3 -16.037 146.317 46.682 1 30.14 ? N UDB 192 A 1 
HETATM 3 O O UDB . . . C 3 -16.171 145.509 44.142 1 28 ? O UDB 192 A 1 
HETATM 4 F F1 UDB . . . C 3 -10.094 148.632 48.938 1 49.91 ? F1 UDB 192 A 1 
HETATM 5 F F2 UDB . . . C 3 -12.709 146.932 52.512 1 49.4 ? F2 UDB 192 A 1 
HETATM 6 C CA UDB . . . C 3 -17.237 145.638 46.246 1 28.96 ? CA UDB 192 A 1 
HETATM 7 C CB UDB . . . C 3 -18.363 146.674 46.083 1 29.11 ? CB UDB 192 A 1 
HETATM 8 C CAA UDB . . . C 3 -18.021 147.683 44.991 1 28.6 ? CAA UDB 192 A 1 
HETATM 9 C CAC UDB . . . C 3 -18.592 147.465 47.379 1 28.35 ? CAC UDB 192 A 1 
HETATM 10 C CAD UDB . . . C 3 -19.663 145.992 45.688 1 28.61 ? CAD UDB 192 A 1 
HETATM 11 C CAG UDB . . . C 3 -15.473 146.187 47.871 1 31.26 ? CAG UDB 192 A 1 
HETATM 12 O OAH UDB . . . C 3 -15.951 145.476 48.745 1 31.19 ? OAH UDB 192 A 1 
HETATM 13 N NAI UDB . . . C 3 -14.387 146.944 47.952 1 34.05 ? NAI UDB 192 A 1 
HETATM 14 C CAJ UDB . . . C 3 -13.438 147.18 48.952 1 41.31 ? CAJ UDB 192 A 1 
HETATM 15 C CAK UDB . . . C 3 -12.253 147.772 48.504 1 43.07 ? CAK UDB 192 A 1 
HETATM 16 C CAL UDB . . . C 3 -11.231 148.07 49.392 1 47.12 ? CAL UDB 192 A 1 
HETATM 17 C CAM UDB . . . C 3 -11.395 147.791 50.749 1 47.19 ? CAM UDB 192 A 1 
HETATM 18 C CAN UDB . . . C 3 -12.579 147.202 51.2 1 47.07 ? CAN UDB 192 A 1 
HETATM 19 C CAP UDB . . . C 3 -13.618 146.895 50.306 1 44.31 ? CAP UDB 192 A 1 
HETATM 20 N NAS UDB . . . C 3 -17.294 143.674 44.709 1 28.1 ? NAS UDB 192 A 1 
HETATM 21 C CAT UDB . . . C 3 -16.902 143.053 43.447 1 26.58 ? CAT UDB 192 A 1 
HETATM 22 C CAU UDB . . . C 3 -18.065 142.662 42.558 1 25.53 ? CAU UDB 192 A 1 
HETATM 23 O OAV UDB . . . C 3 -19.085 143.349 42.465 1 25.23 ? OAV UDB 192 A 1 
HETATM 24 N NAW UDB . . . C 3 -17.861 141.53 41.877 1 22.55 ? NAW UDB 192 A 1 
HETATM 25 O OAX UDB . . . C 3 -18.811 141.026 40.992 1 21.01 ? OAX UDB 192 A 1 
HETATM 26 C CAY UDB . . . C 3 -18.125 142.84 45.589 1 27.98 ? CAY UDB 192 A 1 
HETATM 27 C CAZ UDB . . . C 3 -17.241 142.117 46.613 1 28.45 ? CAZ UDB 192 A 1 
HETATM 28 C CBA UDB . . . C 3 -16.518 140.907 46.034 1 28.7 ? CBA UDB 192 A 1 
HETATM 29 C CBB UDB . . . C 3 -16.388 139.896 47.175 1 30 ? CBB UDB 192 A 1 
HETATM 30 C CBC UDB . . . C 3 -17.37 140.316 48.265 1 28.76 ? CBC UDB 192 A 1 
HETATM 31 C CBD UDB . . . C 3 -18.08 141.575 47.775 1 28.84 ? CBD UDB 192 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#