data_3U83 # _model_server_result.job_id 24iBr1vuA85ADqS2WfVz3Q _model_server_result.datetime_utc '2024-12-19 01:27:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3u83 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3U83 # _exptl.entry_id 3U83 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 266.331 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3U83 _cell.length_a 127.52 _cell.length_b 127.52 _cell.length_c 190.555 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3U83 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 36 A CYS 51 1_555 A SG CYS 109 A CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf2 A SG CYS 157 A CYS 172 1_555 A SG CYS 211 A CYS 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf3 A SG CYS 254 A CYS 269 1_555 A SG CYS 301 A CYS 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? # _chem_comp.formula 'C12 H26 O6' _chem_comp.formula_weight 266.331 _chem_comp.id PG6 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PG6 sing 237 n n C1 H11 PG6 sing 238 n n C1 H12 PG6 sing 239 n n C1 H13 PG6 sing 240 n n O1 C2 PG6 sing 241 n n C2 C3 PG6 sing 242 n n C2 H21 PG6 sing 243 n n C2 H22 PG6 sing 244 n n C3 O2 PG6 sing 245 n n C3 H31 PG6 sing 246 n n C3 H32 PG6 sing 247 n n O2 C4 PG6 sing 248 n n C4 C5 PG6 sing 249 n n C4 H41 PG6 sing 250 n n C4 H42 PG6 sing 251 n n C5 O3 PG6 sing 252 n n C5 H51 PG6 sing 253 n n C5 H52 PG6 sing 254 n n O3 C6 PG6 sing 255 n n C6 C7 PG6 sing 256 n n C6 H61 PG6 sing 257 n n C6 H62 PG6 sing 258 n n C7 O4 PG6 sing 259 n n C7 H71 PG6 sing 260 n n C7 H72 PG6 sing 261 n n O4 C8 PG6 sing 262 n n C8 C9 PG6 sing 263 n n C8 H81 PG6 sing 264 n n C8 H82 PG6 sing 265 n n C9 O5 PG6 sing 266 n n C9 H91 PG6 sing 267 n n C9 H92 PG6 sing 268 n n O5 C10 PG6 sing 269 n n C10 C11 PG6 sing 270 n n C10 H101 PG6 sing 271 n n C10 H102 PG6 sing 272 n n C11 O6 PG6 sing 273 n n C11 H111 PG6 sing 274 n n C11 H112 PG6 sing 275 n n O6 C12 PG6 sing 276 n n C12 H121 PG6 sing 277 n n C12 H122 PG6 sing 278 n n C12 H123 PG6 sing 279 n n # _atom_sites.entry_id 3U83 _atom_sites.fract_transf_matrix[1][1] 0.007842 _atom_sites.fract_transf_matrix[1][2] 0.004528 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009055 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005248 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PG6 A 1 1 1 PG6 PG6 . C 3 HOH A 1 2 2 HOH HOH . C 3 HOH A 2 3 3 HOH HOH . C 3 HOH A 3 4 4 HOH HOH . C 3 HOH A 4 5 5 HOH HOH . C 3 HOH A 5 6 6 HOH HOH . C 3 HOH A 6 7 7 HOH HOH . C 3 HOH A 7 8 8 HOH HOH . C 3 HOH A 8 9 9 HOH HOH . C 3 HOH A 9 10 10 HOH HOH . C 3 HOH A 10 11 11 HOH HOH . C 3 HOH A 11 12 12 HOH HOH . C 3 HOH A 12 13 13 HOH HOH . C 3 HOH A 13 14 14 HOH HOH . C 3 HOH A 14 15 15 HOH HOH . C 3 HOH A 15 347 347 HOH HOH . C 3 HOH A 16 348 348 HOH HOH . C 3 HOH A 17 349 349 HOH HOH . C 3 HOH A 18 350 350 HOH HOH . C 3 HOH A 19 351 351 HOH HOH . C 3 HOH A 20 352 352 HOH HOH . C 3 HOH A 21 353 353 HOH HOH . C 3 HOH A 22 354 354 HOH HOH . C 3 HOH A 23 355 355 HOH HOH . C 3 HOH A 24 356 356 HOH HOH . C 3 HOH A 25 357 357 HOH HOH . C 3 HOH A 26 358 358 HOH HOH . C 3 HOH A 27 359 359 HOH HOH . C 3 HOH A 28 360 360 HOH HOH . C 3 HOH A 29 361 361 HOH HOH . C 3 HOH A 30 362 362 HOH HOH . C 3 HOH A 31 363 363 HOH HOH . C 3 HOH A 32 364 364 HOH HOH . C 3 HOH A 33 365 365 HOH HOH . C 3 HOH A 34 366 366 HOH HOH . C 3 HOH A 35 367 367 HOH HOH . C 3 HOH A 36 368 368 HOH HOH . C 3 HOH A 37 369 369 HOH HOH . C 3 HOH A 38 370 370 HOH HOH . C 3 HOH A 39 371 371 HOH HOH . C 3 HOH A 40 372 372 HOH HOH . C 3 HOH A 41 373 373 HOH HOH . C 3 HOH A 42 374 374 HOH HOH . C 3 HOH A 43 375 375 HOH HOH . C 3 HOH A 44 376 376 HOH HOH . C 3 HOH A 45 377 377 HOH HOH . C 3 HOH A 46 378 378 HOH HOH . C 3 HOH A 47 379 379 HOH HOH . C 3 HOH A 48 380 380 HOH HOH . C 3 HOH A 49 381 381 HOH HOH . C 3 HOH A 50 382 382 HOH HOH . C 3 HOH A 51 383 383 HOH HOH . C 3 HOH A 52 384 384 HOH HOH . C 3 HOH A 53 385 385 HOH HOH . C 3 HOH A 54 386 386 HOH HOH . C 3 HOH A 55 387 387 HOH HOH . C 3 HOH A 56 388 388 HOH HOH . C 3 HOH A 57 389 389 HOH HOH . C 3 HOH A 58 390 390 HOH HOH . C 3 HOH A 59 391 391 HOH HOH . C 3 HOH A 60 392 392 HOH HOH . C 3 HOH A 61 393 393 HOH HOH . C 3 HOH A 62 394 394 HOH HOH . C 3 HOH A 63 395 395 HOH HOH . C 3 HOH A 64 396 396 HOH HOH . C 3 HOH A 65 397 397 HOH HOH . C 3 HOH A 66 398 398 HOH HOH . C 3 HOH A 67 399 399 HOH HOH . C 3 HOH A 68 400 400 HOH HOH . C 3 HOH A 69 401 401 HOH HOH . C 3 HOH A 70 402 402 HOH HOH . C 3 HOH A 71 403 403 HOH HOH . C 3 HOH A 72 404 404 HOH HOH . C 3 HOH A 73 405 405 HOH HOH . C 3 HOH A 74 406 406 HOH HOH . C 3 HOH A 75 407 407 HOH HOH . C 3 HOH A 76 408 408 HOH HOH . C 3 HOH A 77 409 409 HOH HOH . C 3 HOH A 78 410 410 HOH HOH . C 3 HOH A 79 411 411 HOH HOH . C 3 HOH A 80 412 412 HOH HOH . C 3 HOH A 81 413 413 HOH HOH . C 3 HOH A 82 414 414 HOH HOH . C 3 HOH A 83 415 415 HOH HOH . C 3 HOH A 84 416 416 HOH HOH . C 3 HOH A 85 417 417 HOH HOH . C 3 HOH A 86 418 418 HOH HOH . C 3 HOH A 87 419 419 HOH HOH . C 3 HOH A 88 420 420 HOH HOH . C 3 HOH A 89 421 421 HOH HOH . C 3 HOH A 90 422 422 HOH HOH . C 3 HOH A 91 423 423 HOH HOH . C 3 HOH A 92 424 424 HOH HOH . C 3 HOH A 93 425 425 HOH HOH . C 3 HOH A 94 426 426 HOH HOH . C 3 HOH A 95 427 427 HOH HOH . C 3 HOH A 96 428 428 HOH HOH . C 3 HOH A 97 429 429 HOH HOH . C 3 HOH A 98 430 430 HOH HOH . C 3 HOH A 99 431 431 HOH HOH . C 3 HOH A 100 432 432 HOH HOH . C 3 HOH A 101 433 433 HOH HOH . C 3 HOH A 102 434 434 HOH HOH . C 3 HOH A 103 435 435 HOH HOH . C 3 HOH A 104 436 436 HOH HOH . C 3 HOH A 105 437 437 HOH HOH . C 3 HOH A 106 438 438 HOH HOH . C 3 HOH A 107 439 439 HOH HOH . C 3 HOH A 108 440 440 HOH HOH . C 3 HOH A 109 441 441 HOH HOH . C 3 HOH A 110 442 442 HOH HOH . C 3 HOH A 111 443 443 HOH HOH . C 3 HOH A 112 444 444 HOH HOH . C 3 HOH A 113 445 445 HOH HOH . C 3 HOH A 114 446 446 HOH HOH . C 3 HOH A 115 447 447 HOH HOH . C 3 HOH A 116 448 448 HOH HOH . C 3 HOH A 117 449 449 HOH HOH . C 3 HOH A 118 450 450 HOH HOH . C 3 HOH A 119 451 451 HOH HOH . C 3 HOH A 120 452 452 HOH HOH . C 3 HOH A 121 453 453 HOH HOH . C 3 HOH A 122 454 454 HOH HOH . C 3 HOH A 123 455 455 HOH HOH . C 3 HOH A 124 456 456 HOH HOH . C 3 HOH A 125 457 457 HOH HOH . C 3 HOH A 126 458 458 HOH HOH . C 3 HOH A 127 459 459 HOH HOH . C 3 HOH A 128 460 460 HOH HOH . C 3 HOH A 129 461 461 HOH HOH . C 3 HOH A 130 462 462 HOH HOH . C 3 HOH A 131 463 463 HOH HOH . C 3 HOH A 132 464 464 HOH HOH . C 3 HOH A 133 465 465 HOH HOH . C 3 HOH A 134 466 466 HOH HOH . C 3 HOH A 135 467 467 HOH HOH . C 3 HOH A 136 468 468 HOH HOH . C 3 HOH A 137 469 469 HOH HOH . C 3 HOH A 138 470 470 HOH HOH . C 3 HOH A 139 471 471 HOH HOH . C 3 HOH A 140 472 472 HOH HOH . C 3 HOH A 141 473 16 HOH HOH . C 3 HOH A 142 474 17 HOH HOH . C 3 HOH A 143 475 475 HOH HOH . C 3 HOH A 144 476 476 HOH HOH . C 3 HOH A 145 477 477 HOH HOH . C 3 HOH A 146 478 478 HOH HOH . C 3 HOH A 147 479 479 HOH HOH . C 3 HOH A 148 480 480 HOH HOH . C 3 HOH A 149 481 481 HOH HOH . C 3 HOH A 150 482 482 HOH HOH . C 3 HOH A 151 483 483 HOH HOH . C 3 HOH A 152 484 484 HOH HOH . C 3 HOH A 153 485 485 HOH HOH . C 3 HOH A 154 486 486 HOH HOH . C 3 HOH A 155 487 487 HOH HOH . C 3 HOH A 156 488 488 HOH HOH . C 3 HOH A 157 489 489 HOH HOH . C 3 HOH A 158 490 490 HOH HOH . C 3 HOH A 159 491 491 HOH HOH . C 3 HOH A 160 492 492 HOH HOH . C 3 HOH A 161 493 493 HOH HOH . C 3 HOH A 162 494 494 HOH HOH . C 3 HOH A 163 495 495 HOH HOH . C 3 HOH A 164 496 496 HOH HOH . C 3 HOH A 165 497 497 HOH HOH . C 3 HOH A 166 498 498 HOH HOH . C 3 HOH A 167 499 499 HOH HOH . C 3 HOH A 168 500 18 HOH HOH . C 3 HOH A 169 501 19 HOH HOH . C 3 HOH A 170 502 20 HOH HOH . C 3 HOH A 171 503 21 HOH HOH . C 3 HOH A 172 504 22 HOH HOH . C 3 HOH A 173 505 23 HOH HOH . C 3 HOH A 174 506 24 HOH HOH . C 3 HOH A 175 507 25 HOH HOH . C 3 HOH A 176 508 26 HOH HOH . C 3 HOH A 177 509 27 HOH HOH . C 3 HOH A 178 510 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PG6 . . . B 2 -2.952 -4.735 -29.23 1 53.75 ? C1 PG6 1 A 1 HETATM 2 O O1 PG6 . . . B 2 -3.541 -5.527 -28.209 1 53.47 ? O1 PG6 1 A 1 HETATM 3 C C2 PG6 . . . B 2 -2.584 -6.147 -27.355 1 53.46 ? C2 PG6 1 A 1 HETATM 4 C C3 PG6 . . . B 2 -2.799 -7.641 -27.095 1 53.21 ? C3 PG6 1 A 1 HETATM 5 O O2 PG6 . . . B 2 -1.526 -8.288 -27.091 1 53.29 ? O2 PG6 1 A 1 HETATM 6 C C4 PG6 . . . B 2 -1.52 -9.685 -26.874 1 53.13 ? C4 PG6 1 A 1 HETATM 7 C C5 PG6 . . . B 2 -0.174 -10.156 -26.348 1 53.19 ? C5 PG6 1 A 1 HETATM 8 O O3 PG6 . . . B 2 0.317 -11.171 -27.2 1 53.27 ? O3 PG6 1 A 1 HETATM 9 C C6 PG6 . . . B 2 1.587 -11.76 -26.902 1 53.36 ? C6 PG6 1 A 1 HETATM 10 C C7 PG6 . . . B 2 2.818 -10.887 -26.732 1 53.6 ? C7 PG6 1 A 1 HETATM 11 O O4 PG6 . . . B 2 3.039 -10.807 -25.344 1 53.46 ? O4 PG6 1 A 1 HETATM 12 C C8 PG6 . . . B 2 4.321 -11.138 -24.879 1 53.57 ? C8 PG6 1 A 1 HETATM 13 C C9 PG6 . . . B 2 4.768 -10.208 -23.769 1 53.65 ? C9 PG6 1 A 1 HETATM 14 O O5 PG6 . . . B 2 3.732 -9.304 -23.476 1 53.6 ? O5 PG6 1 A 1 HETATM 15 C C10 PG6 . . . B 2 4.021 -8.35 -22.483 1 53.74 ? C10 PG6 1 A 1 HETATM 16 C C11 PG6 . . . B 2 2.687 -7.843 -21.986 1 53.62 ? C11 PG6 1 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #