data_3U87 # _model_server_result.job_id gS0qGHWrufDSQ_Is7OZxvg _model_server_result.datetime_utc '2024-11-02 10:20:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3u87 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":405}' # _entry.id 3U87 # _exptl.entry_id 3U87 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3U87 _cell.length_a 127.821 _cell.length_b 127.821 _cell.length_c 125.333 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3U87 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,O 1 1 B,I,J,K,L,M,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 161 A ASN 161 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 A OD1 ASP 175 A ASP 175 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc3 A OD2 ASP 175 A ASP 175 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc4 A OD2 ASP 175 A ASP 175 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc5 C O2B ANP . A ANP 401 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? metalc ? metalc6 C O3G ANP . A ANP 401 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? metalc ? metalc7 C O2A ANP . A ANP 401 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc8 C O1G ANP . A ANP 401 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc9 E MG MG . A MG 403 1_555 O O HOH . A HOH 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc10 B OD1 ASN 161 B ASN 161 1_555 K MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc11 B OD1 ASP 175 B ASP 175 1_555 J MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc12 B OD2 ASP 175 B ASP 175 1_555 J MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc13 B OD2 ASP 175 B ASP 175 1_555 K MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc14 I O2B ANP . B ANP 401 1_555 J MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc15 I O1B ANP . B ANP 401 1_555 J MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc16 I O2A ANP . B ANP 401 1_555 K MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? metalc ? metalc17 I O2B ANP . B ANP 401 1_555 K MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 353 n n S O2 SO4 doub 354 n n S O3 SO4 sing 355 n n S O4 SO4 sing 356 n n # _atom_sites.entry_id 3U87 _atom_sites.fract_transf_matrix[1][1] 0.007819 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007819 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007973 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ANP A 1 401 2 ANP ANP . D 3 MG A 1 402 3 MG MG . E 3 MG A 1 403 6 MG MG . F 4 CL A 1 404 7 CL CL . G 5 SO4 A 1 405 9 SO4 SO4 . H 6 GOL A 1 406 12 GOL GOL . I 2 ANP B 1 401 1 ANP ANP . J 3 MG B 1 402 4 MG MG . K 3 MG B 1 403 5 MG MG . L 4 CL B 1 404 8 CL CL . M 5 SO4 B 1 405 10 SO4 SO4 . N 6 GOL B 1 406 11 GOL GOL . O 7 HOH A 1 501 3 HOH HOH . O 7 HOH A 2 502 4 HOH HOH . O 7 HOH A 3 503 6 HOH HOH . O 7 HOH A 4 504 8 HOH HOH . O 7 HOH A 5 505 11 HOH HOH . O 7 HOH A 6 506 13 HOH HOH . O 7 HOH A 7 507 14 HOH HOH . O 7 HOH A 8 508 16 HOH HOH . O 7 HOH A 9 509 17 HOH HOH . O 7 HOH A 10 510 20 HOH HOH . O 7 HOH A 11 511 21 HOH HOH . O 7 HOH A 12 512 23 HOH HOH . O 7 HOH A 13 513 24 HOH HOH . O 7 HOH A 14 514 25 HOH HOH . O 7 HOH A 15 515 28 HOH HOH . O 7 HOH A 16 516 30 HOH HOH . O 7 HOH A 17 517 34 HOH HOH . O 7 HOH A 18 518 36 HOH HOH . O 7 HOH A 19 519 37 HOH HOH . O 7 HOH A 20 520 42 HOH HOH . O 7 HOH A 21 521 43 HOH HOH . O 7 HOH A 22 522 45 HOH HOH . O 7 HOH A 23 523 47 HOH HOH . O 7 HOH A 24 524 48 HOH HOH . O 7 HOH A 25 525 50 HOH HOH . O 7 HOH A 26 526 51 HOH HOH . O 7 HOH A 27 527 53 HOH HOH . O 7 HOH A 28 528 54 HOH HOH . P 7 HOH B 1 501 1 HOH HOH . P 7 HOH B 2 502 2 HOH HOH . P 7 HOH B 3 503 5 HOH HOH . P 7 HOH B 4 504 7 HOH HOH . P 7 HOH B 5 505 9 HOH HOH . P 7 HOH B 6 506 10 HOH HOH . P 7 HOH B 7 507 12 HOH HOH . P 7 HOH B 8 508 15 HOH HOH . P 7 HOH B 9 509 18 HOH HOH . P 7 HOH B 10 510 19 HOH HOH . P 7 HOH B 11 511 22 HOH HOH . P 7 HOH B 12 512 26 HOH HOH . P 7 HOH B 13 513 27 HOH HOH . P 7 HOH B 14 514 29 HOH HOH . P 7 HOH B 15 515 31 HOH HOH . P 7 HOH B 16 516 32 HOH HOH . P 7 HOH B 17 517 33 HOH HOH . P 7 HOH B 18 518 35 HOH HOH . P 7 HOH B 19 519 39 HOH HOH . P 7 HOH B 20 520 40 HOH HOH . P 7 HOH B 21 521 41 HOH HOH . P 7 HOH B 22 522 44 HOH HOH . P 7 HOH B 23 523 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 5 54.466 9.916 47.982 0.76 88.05 ? S SO4 405 A 1 HETATM 2 O O1 SO4 . . . G 5 55.184 9.623 49.22 0.76 87.45 ? O1 SO4 405 A 1 HETATM 3 O O2 SO4 . . . G 5 55.343 10.649 47.074 0.76 88.74 ? O2 SO4 405 A 1 HETATM 4 O O3 SO4 . . . G 5 54.045 8.668 47.35 0.76 86.17 ? O3 SO4 405 A 1 HETATM 5 O O4 SO4 . . . G 5 53.293 10.729 48.284 0.76 89.16 ? O4 SO4 405 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #