data_3U88 # _model_server_result.job_id EMBfAR_Qo_qKzfkDvBozeQ _model_server_result.datetime_utc '2024-11-16 06:55:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3u88 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":612}' # _entry.id 3U88 # _exptl.entry_id 3U88 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 326.433 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "(4beta,8alpha,9R)-6'-methoxy-10,11-dihydrocinchonan-9-ol" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3U88 _cell.length_a 187.99 _cell.length_b 187.99 _cell.length_c 238.417 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3U88 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G,H,I,J,K,L,M,N,O,V,W,X,Y,Z 1 1 B,E,F,P,Q,R,S,T,U,AA,BA,CA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 Q N N # _chem_comp.formula 'C20 H26 N2 O2' _chem_comp.formula_weight 326.433 _chem_comp.id 0BR _chem_comp.mon_nstd_flag . _chem_comp.name "(4beta,8alpha,9R)-6'-methoxy-10,11-dihydrocinchonan-9-ol" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAQ CAT 0BR doub 1 n y CAQ CAN 0BR sing 2 n y CAT NAD 0BR sing 3 n y OAA CAL 0BR sing 4 n n CAL CAN 0BR sing 5 n n CAL CAF 0BR sing 6 n n CAN CAP 0BR doub 7 n y NAD CAR 0BR doub 8 n y CAP CAR 0BR sing 9 n y CAP CAS 0BR sing 10 n y CAR CAU 0BR sing 11 n y CAS CAV 0BR doub 12 n y CAU CAW 0BR doub 13 n y CAV CAW 0BR sing 14 n y CAV OAB 0BR sing 15 n n OAB CAX 0BR sing 16 n n CAF NAC 0BR sing 17 n n CAF CAG 0BR sing 18 n n NAC CAJ 0BR sing 19 n n NAC CAK 0BR sing 20 n n CAJ CAH 0BR sing 21 n n CAG CAE 0BR sing 22 n n CAK CAI 0BR sing 23 n n CAH CAE 0BR sing 24 n n CAH CAM 0BR sing 25 n n CAE CAI 0BR sing 26 n n CAM CAO 0BR sing 27 n n CAX H1 0BR sing 28 n n CAX H2 0BR sing 29 n n CAX H3 0BR sing 30 n n CAS H4 0BR sing 31 n n CAW H5 0BR sing 32 n n CAU H6 0BR sing 33 n n CAT H7 0BR sing 34 n n CAQ H8 0BR sing 35 n n CAL H9 0BR sing 36 n n OAA H10 0BR sing 37 n n CAF H11 0BR sing 38 n n CAG H12 0BR sing 39 n n CAG H13 0BR sing 40 n n CAE H14 0BR sing 41 n n CAI H15 0BR sing 42 n n CAI H16 0BR sing 43 n n CAK H17 0BR sing 44 n n CAK H18 0BR sing 45 n n CAJ H20 0BR sing 46 n n CAJ H21 0BR sing 47 n n CAH H22 0BR sing 48 n n CAM H23 0BR sing 49 n n CAM H24 0BR sing 50 n n CAO H25 0BR sing 51 n n CAO H26 0BR sing 52 n n CAO H27 0BR sing 53 n n # _atom_sites.entry_id 3U88 _atom_sites.fract_transf_matrix[1][1] 0.005319 _atom_sites.fract_transf_matrix[1][2] 0.003071 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006142 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004194 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 CHD A 1 611 101 CHD CHD . H 5 GGB A 1 613 105 GGB CAN . I 6 0BR A 1 612 612 0BR QUI . J 5 GGB A 1 614 107 GGB CAN . K 7 GLV A 1 615 110 GLV GLX . L 7 GLV A 1 616 111 GLV GLX . M 7 GLV A 1 617 112 GLV GLX . N 8 SO4 A 1 618 3 SO4 SO4 . O 8 SO4 A 1 619 8 SO4 SO4 . P 4 CHD B 1 611 102 CHD CHD . Q 6 0BR B 1 612 612 0BR QUI . R 5 GGB B 1 615 106 GGB CAN . S 7 GLV B 1 616 115 GLV GLX . T 8 SO4 B 1 617 12 SO4 SO4 . U 8 SO4 B 1 618 13 SO4 SO4 . V 8 SO4 M 1 2 2 SO4 SO4 . W 8 SO4 M 1 154 14 SO4 SO4 . X 5 GGB C 1 108 108 GGB CAN . Y 5 GGB C 1 109 109 GGB CAN . Z 7 GLV C 1 113 113 GLV GLX . AA 8 SO4 N 1 1 1 SO4 SO4 . BA 8 SO4 N 1 154 10 SO4 SO4 . CA 7 GLV D 1 114 114 GLV GLX . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAX 0BR . . . I 6 -49.811 55.997 15.477 1 56.39 ? CAX 0BR 612 A 1 HETATM 2 O OAB 0BR . . . I 6 -48.461 55.528 15.435 0.92 58.72 ? OAB 0BR 612 A 1 HETATM 3 C CAV 0BR . . . I 6 -48.454 54.177 15.279 1 59.49 ? CAV 0BR 612 A 1 HETATM 4 C CAS 0BR . . . I 6 -49.652 53.49 15.118 0.58 67.65 ? CAS 0BR 612 A 1 HETATM 5 C CAP 0BR . . . I 6 -49.642 52.109 14.959 0.8 64.08 ? CAP 0BR 612 A 1 HETATM 6 C CAW 0BR . . . I 6 -47.25 53.483 15.28 0.94 58.64 ? CAW 0BR 612 A 1 HETATM 7 C CAU 0BR . . . I 6 -47.242 52.102 15.121 0.9 60.32 ? CAU 0BR 612 A 1 HETATM 8 C CAR 0BR . . . I 6 -48.439 51.413 14.96 1 59.43 ? CAR 0BR 612 A 1 HETATM 9 N NAD 0BR . . . I 6 -48.427 50.08 14.807 1 58.89 ? NAD 0BR 612 A 1 HETATM 10 C CAT 0BR . . . I 6 -49.547 49.393 14.652 0.7 65.02 ? CAT 0BR 612 A 1 HETATM 11 C CAQ 0BR . . . I 6 -50.781 50.034 14.642 1 63.23 ? CAQ 0BR 612 A 1 HETATM 12 C CAN 0BR . . . I 6 -50.83 51.412 14.798 1 60.29 ? CAN 0BR 612 A 1 HETATM 13 C CAL 0BR . . . I 6 -52.171 52.148 14.793 1 61.56 ? CAL 0BR 612 A 1 HETATM 14 O OAA 0BR . . . I 6 -53.238 51.197 14.784 0.62 70.75 ? OAA 0BR 612 A 1 HETATM 15 C CAF 0BR . . . I 6 -52.278 53.024 16.043 0.91 64.97 ? CAF 0BR 612 A 1 HETATM 16 C CAG 0BR . . . I 6 -51.322 52.538 17.137 1 67.75 ? CAG 0BR 612 A 1 HETATM 17 C CAE 0BR . . . I 6 -52.145 52.182 18.367 0.36 69.5 ? CAE 0BR 612 A 1 HETATM 18 C CAI 0BR . . . I 6 -52.877 53.436 18.82 1 57.89 ? CAI 0BR 612 A 1 HETATM 19 C CAK 0BR . . . I 6 -53.81 53.902 17.701 0.75 65.55 ? CAK 0BR 612 A 1 HETATM 20 N NAC 0BR . . . I 6 -53.666 53.005 16.54 1 66.91 ? NAC 0BR 612 A 1 HETATM 21 C CAJ 0BR . . . I 6 -54.069 51.632 16.894 1 63.06 ? CAJ 0BR 612 A 1 HETATM 22 C CAH 0BR . . . I 6 -53.158 51.109 18.004 1 64.2 ? CAH 0BR 612 A 1 HETATM 23 C CAM 0BR . . . I 6 -53.995 50.754 19.234 0.66 60.45 ? CAM 0BR 612 A 1 HETATM 24 C CAO 0BR . . . I 6 -53.694 51.321 20.467 1 54.87 ? CAO 0BR 612 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 433 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 24 #