data_3U88
#
_model_server_result.job_id            eTsdnHYgEU16vgTBJiRLrA 
_model_server_result.datetime_utc      '2024-11-16 06:47:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3u88 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":612}' 
#
_entry.id    3U88 
#
_exptl.entry_id    3U88 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              326.433 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "(4beta,8alpha,9R)-6'-methoxy-10,11-dihydrocinchonan-9-ol" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3U88 
_cell.length_a            187.99 
_cell.length_b            187.99 
_cell.length_c            238.417 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3U88 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G,H,I,J,K,L,M,N,O,V,W,X,Y,Z 1 1 
B,E,F,P,Q,R,S,T,U,AA,BA,CA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 I N N 
? 6 Q N N 
#
_chem_comp.formula           'C20 H26 N2 O2' 
_chem_comp.formula_weight    326.433 
_chem_comp.id                0BR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "(4beta,8alpha,9R)-6'-methoxy-10,11-dihydrocinchonan-9-ol" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAQ CAT 0BR doub 1 n y 
CAQ CAN 0BR sing 2 n y 
CAT NAD 0BR sing 3 n y 
OAA CAL 0BR sing 4 n n 
CAL CAN 0BR sing 5 n n 
CAL CAF 0BR sing 6 n n 
CAN CAP 0BR doub 7 n y 
NAD CAR 0BR doub 8 n y 
CAP CAR 0BR sing 9 n y 
CAP CAS 0BR sing 10 n y 
CAR CAU 0BR sing 11 n y 
CAS CAV 0BR doub 12 n y 
CAU CAW 0BR doub 13 n y 
CAV CAW 0BR sing 14 n y 
CAV OAB 0BR sing 15 n n 
OAB CAX 0BR sing 16 n n 
CAF NAC 0BR sing 17 n n 
CAF CAG 0BR sing 18 n n 
NAC CAJ 0BR sing 19 n n 
NAC CAK 0BR sing 20 n n 
CAJ CAH 0BR sing 21 n n 
CAG CAE 0BR sing 22 n n 
CAK CAI 0BR sing 23 n n 
CAH CAE 0BR sing 24 n n 
CAH CAM 0BR sing 25 n n 
CAE CAI 0BR sing 26 n n 
CAM CAO 0BR sing 27 n n 
CAX H1 0BR sing 28 n n 
CAX H2 0BR sing 29 n n 
CAX H3 0BR sing 30 n n 
CAS H4 0BR sing 31 n n 
CAW H5 0BR sing 32 n n 
CAU H6 0BR sing 33 n n 
CAT H7 0BR sing 34 n n 
CAQ H8 0BR sing 35 n n 
CAL H9 0BR sing 36 n n 
OAA H10 0BR sing 37 n n 
CAF H11 0BR sing 38 n n 
CAG H12 0BR sing 39 n n 
CAG H13 0BR sing 40 n n 
CAE H14 0BR sing 41 n n 
CAI H15 0BR sing 42 n n 
CAI H16 0BR sing 43 n n 
CAK H17 0BR sing 44 n n 
CAK H18 0BR sing 45 n n 
CAJ H20 0BR sing 46 n n 
CAJ H21 0BR sing 47 n n 
CAH H22 0BR sing 48 n n 
CAM H23 0BR sing 49 n n 
CAM H24 0BR sing 50 n n 
CAO H25 0BR sing 51 n n 
CAO H26 0BR sing 52 n n 
CAO H27 0BR sing 53 n n 
#
_atom_sites.entry_id                     3U88 
_atom_sites.fract_transf_matrix[1][1]    0.005319 
_atom_sites.fract_transf_matrix[1][2]    0.003071 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006142 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004194 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 CHD A 1 611 101 CHD CHD . 
H 5 GGB A 1 613 105 GGB CAN . 
I 6 0BR A 1 612 612 0BR QUI . 
J 5 GGB A 1 614 107 GGB CAN . 
K 7 GLV A 1 615 110 GLV GLX . 
L 7 GLV A 1 616 111 GLV GLX . 
M 7 GLV A 1 617 112 GLV GLX . 
N 8 SO4 A 1 618 3 SO4 SO4 . 
O 8 SO4 A 1 619 8 SO4 SO4 . 
P 4 CHD B 1 611 102 CHD CHD . 
Q 6 0BR B 1 612 612 0BR QUI . 
R 5 GGB B 1 615 106 GGB CAN . 
S 7 GLV B 1 616 115 GLV GLX . 
T 8 SO4 B 1 617 12 SO4 SO4 . 
U 8 SO4 B 1 618 13 SO4 SO4 . 
V 8 SO4 M 1 2 2 SO4 SO4 . 
W 8 SO4 M 1 154 14 SO4 SO4 . 
X 5 GGB C 1 108 108 GGB CAN . 
Y 5 GGB C 1 109 109 GGB CAN . 
Z 7 GLV C 1 113 113 GLV GLX . 
AA 8 SO4 N 1 1 1 SO4 SO4 . 
BA 8 SO4 N 1 154 10 SO4 SO4 . 
CA 7 GLV D 1 114 114 GLV GLX . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAX 0BR . . . Q 6 -49.8 55.391 19.103 1 57.91 ? CAX 0BR 612 B 1 
HETATM 2 O OAB 0BR . . . Q 6 -49.917 53.999 18.798 1 62.16 ? OAB 0BR 612 B 1 
HETATM 3 C CAV 0BR . . . Q 6 -48.68 53.432 18.785 1 56.12 ? CAV 0BR 612 B 1 
HETATM 4 C CAS 0BR . . . Q 6 -47.549 54.23 18.907 1 58.62 ? CAS 0BR 612 B 1 
HETATM 5 C CAP 0BR . . . Q 6 -46.287 53.648 18.893 1 61.13 ? CAP 0BR 612 B 1 
HETATM 6 C CAW 0BR . . . Q 6 -48.548 52.055 18.649 1 56.72 ? CAW 0BR 612 B 1 
HETATM 7 C CAU 0BR . . . Q 6 -47.285 51.475 18.635 1 59.27 ? CAU 0BR 612 B 1 
HETATM 8 C CAR 0BR . . . Q 6 -46.152 52.272 18.757 1 56.98 ? CAR 0BR 612 B 1 
HETATM 9 N NAD 0BR . . . Q 6 -44.934 51.708 18.744 1 58.92 ? NAD 0BR 612 B 1 
HETATM 10 C CAT 0BR . . . Q 6 -43.835 52.435 18.858 1 60.99 ? CAT 0BR 612 B 1 
HETATM 11 C CAQ 0BR . . . Q 6 -43.906 53.817 18.996 1 63.13 ? CAQ 0BR 612 B 1 
HETATM 12 C CAN 0BR . . . Q 6 -45.15 54.433 19.014 1 63.01 ? CAN 0BR 612 B 1 
HETATM 13 C CAL 0BR . . . Q 6 -45.264 55.951 19.165 1 61.75 ? CAL 0BR 612 B 1 
HETATM 14 O OAA 0BR . . . Q 6 -45.305 56.291 20.553 1 61.75 ? OAA 0BR 612 B 1 
HETATM 15 C CAF 0BR . . . Q 6 -44.055 56.622 18.51 1 64.92 ? CAF 0BR 612 B 1 
HETATM 16 C CAG 0BR . . . Q 6 -44.286 58.128 18.345 1 67.72 ? CAG 0BR 612 B 1 
HETATM 17 C CAE 0BR . . . Q 6 -44.194 58.466 16.864 1 64.67 ? CAE 0BR 612 B 1 
HETATM 18 C CAI 0BR . . . Q 6 -42.801 58.087 16.383 1 64.71 ? CAI 0BR 612 B 1 
HETATM 19 C CAK 0BR . . . Q 6 -42.597 56.584 16.576 1 60.83 ? CAK 0BR 612 B 1 
HETATM 20 N NAC 0BR . . . Q 6 -43.802 56.003 17.196 1 72.53 ? NAC 0BR 612 B 1 
HETATM 21 C CAJ 0BR . . . Q 6 -44.969 56.171 16.312 1 68.57 ? CAJ 0BR 612 B 1 
HETATM 22 C CAH 0BR . . . Q 6 -45.23 57.662 16.096 1 63.96 ? CAH 0BR 612 B 1 
HETATM 23 C CAM 0BR . . . Q 6 -45.136 57.991 14.606 1 61.24 ? CAM 0BR 612 B 1 
HETATM 24 C CAO 0BR . . . Q 6 -44.631 57.049 13.717 1 53.07 ? CAO 0BR 612 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    42 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           24 
#