data_3U9S # _model_server_result.job_id QiCzXIT59UyEb2lI3x92Ng _model_server_result.datetime_utc '2024-12-04 12:37:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3u9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":591}' # _entry.id 3U9S # _exptl.entry_id 3U9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.74 _cell.angle_gamma 90 _cell.entry_id 3U9S _cell.length_a 131.51 _cell.length_b 255.34 _cell.length_c 152.67 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3U9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 S N N ? 4 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 617 A LYS 681 1_555 M C11 BTI . A BTI 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 I NZ LYS 617 I LYS 681 1_555 R C11 BTI . I BTI 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3U9S _atom_sites.fract_transf_matrix[1][1] 0.007604 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000764 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003916 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006583 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 BTI A 1 801 801 BTI BTI . N 4 COA B 1 591 591 COA COA . O 4 COA D 1 591 591 COA COA . P 4 COA F 1 591 591 COA COA . Q 4 COA H 1 591 591 COA COA . R 3 BTI I 1 801 801 BTI BTI . S 4 COA J 1 591 591 COA COA . T 4 COA L 1 591 591 COA COA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . T 4 42.172 -13.747 83.006 1 123.32 ? N1A COA 591 L 1 HETATM 2 C C2A COA . . . T 4 43.134 -14.5 83.511 1 123.21 ? C2A COA 591 L 1 HETATM 3 N N3A COA . . . T 4 42.939 -15.774 83.794 1 123.64 ? N3A COA 591 L 1 HETATM 4 C C4A COA . . . T 4 41.744 -16.347 83.582 1 124.67 ? C4A COA 591 L 1 HETATM 5 C C5A COA . . . T 4 40.708 -15.588 83.063 1 125.23 ? C5A COA 591 L 1 HETATM 6 C C6A COA . . . T 4 40.956 -14.253 82.766 1 124.96 ? C6A COA 591 L 1 HETATM 7 N N6A COA . . . T 4 40.022 -13.501 82.191 1 124.57 ? N6A COA 591 L 1 HETATM 8 N N7A COA . . . T 4 39.646 -16.382 82.973 1 125.35 ? N7A COA 591 L 1 HETATM 9 C C8A COA . . . T 4 39.996 -17.591 83.405 1 125 ? C8A COA 591 L 1 HETATM 10 N N9A COA . . . T 4 41.276 -17.574 83.765 1 125.23 ? N9A COA 591 L 1 HETATM 11 C C1B COA . . . T 4 42.089 -18.743 84.159 1 129.29 ? C1B COA 591 L 1 HETATM 12 C C2B COA . . . T 4 42.358 -18.753 85.661 1 132.01 ? C2B COA 591 L 1 HETATM 13 O O2B COA . . . T 4 43.542 -17.996 85.928 1 135.73 ? O2B COA 591 L 1 HETATM 14 C C3B COA . . . T 4 42.608 -20.235 85.934 1 131.55 ? C3B COA 591 L 1 HETATM 15 O O3B COA . . . T 4 44.017 -20.432 86.054 1 132.75 ? O3B COA 591 L 1 HETATM 16 P P3B COA . . . T 4 44.564 -21.704 86.867 1 132.69 ? P3B COA 591 L 1 HETATM 17 O O7A COA . . . T 4 44.197 -21.639 88.299 1 131 ? O7A COA 591 L 1 HETATM 18 O O8A COA . . . T 4 46.154 -21.699 86.614 1 131.53 ? O8A COA 591 L 1 HETATM 19 O O9A COA . . . T 4 43.953 -22.999 86.133 1 132.92 ? O9A COA 591 L 1 HETATM 20 C C4B COA . . . T 4 42.09 -20.95 84.686 1 129.16 ? C4B COA 591 L 1 HETATM 21 O O4B COA . . . T 4 41.374 -19.963 83.929 1 128.04 ? O4B COA 591 L 1 HETATM 22 C C5B COA . . . T 4 41.021 -21.954 85.103 1 127.26 ? C5B COA 591 L 1 HETATM 23 O O5B COA . . . T 4 39.756 -21.33 84.89 1 125.57 ? O5B COA 591 L 1 HETATM 24 P P1A COA . . . T 4 38.424 -22.127 85.29 1 125.02 ? P1A COA 591 L 1 HETATM 25 O O1A COA . . . T 4 37.443 -21.169 85.842 1 128.22 ? O1A COA 591 L 1 HETATM 26 O O2A COA . . . T 4 38.834 -23.284 86.115 1 128.8 ? O2A COA 591 L 1 HETATM 27 O O3A COA . . . T 4 37.893 -22.637 83.865 1 128.44 ? O3A COA 591 L 1 HETATM 28 P P2A COA . . . T 4 36.314 -22.87 83.711 1 127.94 ? P2A COA 591 L 1 HETATM 29 O O4A COA . . . T 4 35.775 -23.298 85.019 1 129.97 ? O4A COA 591 L 1 HETATM 30 O O5A COA . . . T 4 36.114 -23.763 82.55 1 130.74 ? O5A COA 591 L 1 HETATM 31 O O6A COA . . . T 4 35.755 -21.401 83.369 1 130.78 ? O6A COA 591 L 1 HETATM 32 C CBP COA . . . T 4 35.862 -19.013 82.814 1 120.35 ? CBP COA 591 L 1 HETATM 33 C CCP COA . . . T 4 36.632 -20.306 83.094 1 125.61 ? CCP COA 591 L 1 HETATM 34 C CDP COA . . . T 4 36.477 -18.31 81.604 1 119.44 ? CDP COA 591 L 1 HETATM 35 C CEP COA . . . T 4 34.392 -19.316 82.523 1 118.71 ? CEP COA 591 L 1 HETATM 36 C CAP COA . . . T 4 35.95 -18.103 84.04 1 120.51 ? CAP COA 591 L 1 HETATM 37 O OAP COA . . . T 4 37.327 -17.85 84.327 1 119.1 ? OAP COA 591 L 1 HETATM 38 C C9P COA . . . T 4 35.247 -16.775 83.759 1 120.79 ? C9P COA 591 L 1 HETATM 39 O O9P COA . . . T 4 34.066 -16.599 84.051 1 122.72 ? O9P COA 591 L 1 HETATM 40 N N8P COA . . . T 4 36.02 -15.851 83.196 1 118.67 ? N8P COA 591 L 1 HETATM 41 C C7P COA . . . T 4 35.461 -14.675 82.515 1 116.33 ? C7P COA 591 L 1 HETATM 42 C C6P COA . . . T 4 36.551 -14.025 81.661 1 114.67 ? C6P COA 591 L 1 HETATM 43 C C5P COA . . . T 4 36.268 -12.534 81.474 1 112.32 ? C5P COA 591 L 1 HETATM 44 O O5P COA . . . T 4 35.312 -12.008 82.041 1 112.81 ? O5P COA 591 L 1 HETATM 45 N N4P COA . . . T 4 37.117 -11.891 80.676 1 109.25 ? N4P COA 591 L 1 HETATM 46 C C3P COA . . . T 4 36.752 -10.657 79.964 1 104 ? C3P COA 591 L 1 HETATM 47 C C2P COA . . . T 4 38.01 -9.927 79.487 1 99.47 ? C2P COA 591 L 1 HETATM 48 S S1P COA . . . T 4 38.079 -9.703 77.672 1 98.65 ? S1P COA 591 L 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 128 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 48 #