data_3UA7 # _model_server_result.job_id 0Y3jHYei9OfFNXZHe1c52A _model_server_result.datetime_utc '2024-11-04 23:21:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ua7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1}' # _entry.id 3UA7 # _exptl.entry_id 3UA7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3UA7 _cell.length_a 51.39 _cell.length_b 51.39 _cell.length_c 185.59 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UA7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,G,H,I,N,R 1 1 D,F,L,M,Q,S 2 1 B,O 3 1 C,J,K,P 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 E C ACE 1 E ACE 0 1_555 E N ALA 2 E ALA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? metalc ? metalc1 A O GLY 4 A GLY 83 1_555 I NA NA . A NA 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc2 I NA NA . A NA 145 1_555 N O HOH . A HOH 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc3 I NA NA . A NA 145 1_555 B O GLY 4 B GLY 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc4 I NA NA . A NA 145 1_555 Q O HOH . D HOH 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc5 J ZN ZN . C ZN 1 1_555 C ND1 HIS 25 C HIS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc6 J ZN ZN . C ZN 1 1_555 C OE2 GLU 28 C GLU 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc7 J ZN ZN . C ZN 1 1_555 K O2 FMT . C FMT 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.855 ? metalc ? metalc8 M O1 FMT . D FMT 1 1_555 L ZN ZN . D ZN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc9 L ZN ZN . D ZN 2 1_555 D ND1 HIS 25 D HIS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc10 L ZN ZN . D ZN 2 1_555 D OE2 GLU 28 D GLU 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 126 n n C1 C2 GOL sing 127 n n C1 H11 GOL sing 128 n n C1 H12 GOL sing 129 n n O1 HO1 GOL sing 130 n n C2 O2 GOL sing 131 n n C2 C3 GOL sing 132 n n C2 H2 GOL sing 133 n n O2 HO2 GOL sing 134 n n C3 O3 GOL sing 135 n n C3 H31 GOL sing 136 n n C3 H32 GOL sing 137 n n O3 HO3 GOL sing 138 n n # _atom_sites.entry_id 3UA7 _atom_sites.fract_transf_matrix[1][1] 0.019459 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005388 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 GOL A 1 1 1 GOL GOL . H 4 CL A 1 144 1 CL CL . I 5 NA A 1 145 1 NA NA . J 6 ZN C 1 1 1 ZN ZN . K 7 FMT C 1 144 1 FMT FMT . L 6 ZN D 1 2 2 ZN ZN . M 7 FMT D 1 1 1 FMT FMT . N 8 HOH A 1 2 2 HOH HOH . N 8 HOH A 2 3 3 HOH HOH . N 8 HOH A 3 4 4 HOH HOH . N 8 HOH A 4 7 7 HOH HOH . N 8 HOH A 5 11 11 HOH HOH . N 8 HOH A 6 16 16 HOH HOH . N 8 HOH A 7 18 18 HOH HOH . N 8 HOH A 8 19 19 HOH HOH . N 8 HOH A 9 21 21 HOH HOH . N 8 HOH A 10 22 22 HOH HOH . N 8 HOH A 11 27 27 HOH HOH . N 8 HOH A 12 41 41 HOH HOH . N 8 HOH A 13 43 43 HOH HOH . N 8 HOH A 14 44 44 HOH HOH . N 8 HOH A 15 45 45 HOH HOH . N 8 HOH A 16 54 54 HOH HOH . N 8 HOH A 17 62 62 HOH HOH . N 8 HOH A 18 69 69 HOH HOH . N 8 HOH A 19 71 71 HOH HOH . N 8 HOH A 20 73 73 HOH HOH . N 8 HOH A 21 78 78 HOH HOH . N 8 HOH A 22 146 82 HOH HOH . N 8 HOH A 23 147 87 HOH HOH . N 8 HOH A 24 148 90 HOH HOH . N 8 HOH A 25 149 96 HOH HOH . N 8 HOH A 26 150 97 HOH HOH . N 8 HOH A 27 151 151 HOH HOH . N 8 HOH A 28 152 100 HOH HOH . N 8 HOH A 29 153 153 HOH HOH . N 8 HOH A 30 154 101 HOH HOH . N 8 HOH A 31 155 113 HOH HOH . N 8 HOH A 32 156 114 HOH HOH . N 8 HOH A 33 157 117 HOH HOH . N 8 HOH A 34 158 158 HOH HOH . N 8 HOH A 35 159 134 HOH HOH . N 8 HOH A 36 160 160 HOH HOH . N 8 HOH A 37 161 161 HOH HOH . N 8 HOH A 38 162 137 HOH HOH . N 8 HOH A 39 163 140 HOH HOH . N 8 HOH A 40 164 141 HOH HOH . N 8 HOH A 41 165 142 HOH HOH . N 8 HOH A 42 166 166 HOH HOH . N 8 HOH A 43 167 167 HOH HOH . N 8 HOH A 44 168 143 HOH HOH . N 8 HOH A 45 169 169 HOH HOH . N 8 HOH A 46 170 170 HOH HOH . N 8 HOH A 47 171 145 HOH HOH . N 8 HOH A 48 172 172 HOH HOH . O 8 HOH B 1 5 5 HOH HOH . O 8 HOH B 2 8 8 HOH HOH . O 8 HOH B 3 12 12 HOH HOH . O 8 HOH B 4 15 15 HOH HOH . O 8 HOH B 5 23 23 HOH HOH . O 8 HOH B 6 25 25 HOH HOH . O 8 HOH B 7 26 26 HOH HOH . O 8 HOH B 8 28 28 HOH HOH . O 8 HOH B 9 30 30 HOH HOH . O 8 HOH B 10 32 32 HOH HOH . O 8 HOH B 11 33 33 HOH HOH . O 8 HOH B 12 35 35 HOH HOH . O 8 HOH B 13 36 36 HOH HOH . O 8 HOH B 14 37 37 HOH HOH . O 8 HOH B 15 42 42 HOH HOH . O 8 HOH B 16 47 47 HOH HOH . O 8 HOH B 17 48 48 HOH HOH . O 8 HOH B 18 49 49 HOH HOH . O 8 HOH B 19 53 53 HOH HOH . O 8 HOH B 20 63 63 HOH HOH . O 8 HOH B 21 64 64 HOH HOH . O 8 HOH B 22 67 67 HOH HOH . O 8 HOH B 23 68 68 HOH HOH . O 8 HOH B 24 72 72 HOH HOH . O 8 HOH B 25 74 74 HOH HOH . O 8 HOH B 26 76 76 HOH HOH . O 8 HOH B 27 79 79 HOH HOH . O 8 HOH B 28 144 144 HOH HOH . O 8 HOH B 29 145 80 HOH HOH . O 8 HOH B 30 146 83 HOH HOH . O 8 HOH B 31 147 85 HOH HOH . O 8 HOH B 32 148 148 HOH HOH . O 8 HOH B 33 149 86 HOH HOH . O 8 HOH B 34 150 89 HOH HOH . O 8 HOH B 35 151 95 HOH HOH . O 8 HOH B 36 152 98 HOH HOH . O 8 HOH B 37 153 103 HOH HOH . O 8 HOH B 38 154 154 HOH HOH . O 8 HOH B 39 155 109 HOH HOH . O 8 HOH B 40 156 156 HOH HOH . O 8 HOH B 41 157 157 HOH HOH . O 8 HOH B 42 158 111 HOH HOH . O 8 HOH B 43 159 159 HOH HOH . O 8 HOH B 44 160 116 HOH HOH . O 8 HOH B 45 161 119 HOH HOH . O 8 HOH B 46 162 120 HOH HOH . O 8 HOH B 47 163 122 HOH HOH . O 8 HOH B 48 164 164 HOH HOH . O 8 HOH B 49 165 124 HOH HOH . O 8 HOH B 50 166 133 HOH HOH . O 8 HOH B 51 167 136 HOH HOH . O 8 HOH B 52 168 168 HOH HOH . O 8 HOH B 53 169 138 HOH HOH . O 8 HOH B 54 171 171 HOH HOH . P 8 HOH C 1 6 6 HOH HOH . P 8 HOH C 2 9 9 HOH HOH . P 8 HOH C 3 13 13 HOH HOH . P 8 HOH C 4 14 14 HOH HOH . P 8 HOH C 5 39 39 HOH HOH . P 8 HOH C 6 46 46 HOH HOH . P 8 HOH C 7 50 50 HOH HOH . P 8 HOH C 8 52 52 HOH HOH . P 8 HOH C 9 56 56 HOH HOH . P 8 HOH C 10 58 58 HOH HOH . P 8 HOH C 11 65 65 HOH HOH . P 8 HOH C 12 145 1 HOH HOH . P 8 HOH C 13 146 146 HOH HOH . P 8 HOH C 14 147 147 HOH HOH . P 8 HOH C 15 148 84 HOH HOH . P 8 HOH C 16 149 92 HOH HOH . P 8 HOH C 17 150 94 HOH HOH . P 8 HOH C 18 151 105 HOH HOH . P 8 HOH C 19 152 118 HOH HOH . P 8 HOH C 20 153 123 HOH HOH . P 8 HOH C 21 154 125 HOH HOH . P 8 HOH C 22 155 155 HOH HOH . P 8 HOH C 23 156 126 HOH HOH . P 8 HOH C 24 157 129 HOH HOH . P 8 HOH C 25 158 130 HOH HOH . P 8 HOH C 26 159 131 HOH HOH . Q 8 HOH D 1 10 10 HOH HOH . Q 8 HOH D 2 17 17 HOH HOH . Q 8 HOH D 3 20 20 HOH HOH . Q 8 HOH D 4 24 24 HOH HOH . Q 8 HOH D 5 29 29 HOH HOH . Q 8 HOH D 6 31 31 HOH HOH . Q 8 HOH D 7 34 34 HOH HOH . Q 8 HOH D 8 38 38 HOH HOH . Q 8 HOH D 9 51 51 HOH HOH . Q 8 HOH D 10 55 55 HOH HOH . Q 8 HOH D 11 57 57 HOH HOH . Q 8 HOH D 12 59 59 HOH HOH . Q 8 HOH D 13 60 60 HOH HOH . Q 8 HOH D 14 66 66 HOH HOH . Q 8 HOH D 15 70 70 HOH HOH . Q 8 HOH D 16 75 75 HOH HOH . Q 8 HOH D 17 77 77 HOH HOH . Q 8 HOH D 18 144 81 HOH HOH . Q 8 HOH D 19 145 88 HOH HOH . Q 8 HOH D 20 146 91 HOH HOH . Q 8 HOH D 21 147 93 HOH HOH . Q 8 HOH D 22 148 99 HOH HOH . Q 8 HOH D 23 149 149 HOH HOH . Q 8 HOH D 24 150 150 HOH HOH . Q 8 HOH D 25 151 104 HOH HOH . Q 8 HOH D 26 152 152 HOH HOH . Q 8 HOH D 27 153 106 HOH HOH . Q 8 HOH D 28 154 107 HOH HOH . Q 8 HOH D 29 155 108 HOH HOH . Q 8 HOH D 30 156 110 HOH HOH . Q 8 HOH D 31 157 115 HOH HOH . Q 8 HOH D 32 158 121 HOH HOH . Q 8 HOH D 33 159 128 HOH HOH . Q 8 HOH D 34 160 132 HOH HOH . Q 8 HOH D 35 161 135 HOH HOH . Q 8 HOH D 36 162 162 HOH HOH . Q 8 HOH D 37 163 139 HOH HOH . Q 8 HOH D 38 173 173 HOH HOH . R 8 HOH E 1 102 102 HOH HOH . R 8 HOH E 2 112 112 HOH HOH . R 8 HOH E 3 163 163 HOH HOH . R 8 HOH E 4 165 165 HOH HOH . S 8 HOH F 1 40 40 HOH HOH . S 8 HOH F 2 61 61 HOH HOH . S 8 HOH F 3 127 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 3 -17.383 -0.425 -1.934 1 26.58 ? C1 GOL 1 A 1 HETATM 2 O O1 GOL . . . G 3 -18.775 -0.71 -1.848 1 24.55 ? O1 GOL 1 A 1 HETATM 3 C C2 GOL . . . G 3 -17.223 0.031 -3.402 1 17.19 ? C2 GOL 1 A 1 HETATM 4 O O2 GOL . . . G 3 -17.91 1.193 -3.742 1 43.92 ? O2 GOL 1 A 1 HETATM 5 C C3 GOL . . . G 3 -15.799 0.064 -3.971 1 29.14 ? C3 GOL 1 A 1 HETATM 6 O O3 GOL . . . G 3 -15.347 1.372 -4.177 1 37.44 ? O3 GOL 1 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #