data_3UA9 # _model_server_result.job_id CBg2Pr1ihUHtDTXYUUIHLQ _model_server_result.datetime_utc '2024-11-25 07:32:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ua9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2}' # _entry.id 3UA9 # _exptl.entry_id 3UA9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 409.437 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(3aR,4S,7R,7aS)-1,3-dioxo-1,3,3a,4,7,7a-hexahydro-2H-4,7-methanoisoindol-2-yl]-N-(quinolin-8-yl)benzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3UA9 _cell.length_a 92.82 _cell.length_b 93.77 _cell.length_c 121.83 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UA9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,M 1 1 B,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C ZN ZN . A ZN 1 1_555 A SG CYS 159 A CYS 1081 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc2 C ZN ZN . A ZN 1 1_555 A ND1 HIS 162 A HIS 1084 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc3 C ZN ZN . A ZN 1 1_555 A SG CYS 167 A CYS 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc4 C ZN ZN . A ZN 1 1_555 A SG CYS 170 A CYS 1092 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc5 H ZN ZN . B ZN 2 1_555 B SG CYS 159 B CYS 1081 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc6 H ZN ZN . B ZN 2 1_555 B ND1 HIS 162 B HIS 1084 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc7 H ZN ZN . B ZN 2 1_555 B SG CYS 167 B CYS 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc8 H ZN ZN . B ZN 2 1_555 B SG CYS 170 B CYS 1092 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? # _chem_comp.formula 'C25 H19 N3 O3' _chem_comp.formula_weight 409.437 _chem_comp.id IWR _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(3aR,4S,7R,7aS)-1,3-dioxo-1,3,3a,4,7,7a-hexahydro-2H-4,7-methanoisoindol-2-yl]-N-(quinolin-8-yl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 4-[(1R,2S,6R,7S)-3,5-dioxo-4-azatricyclo[5.2.1.0{2,6}]dec-8-en-4-yl]-N-(quinolin-8-yl)benzamide # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OBE CAW IWR doub 173 n n CBB CAV IWR sing 174 n n CBB CBA IWR sing 175 n n CBB CBC IWR sing 176 n n CAW CAV IWR sing 177 n n CAW NAT IWR sing 178 n n CAV CAU IWR sing 179 n n CBA CAZ IWR doub 180 n n CBC CAY IWR sing 181 n n NAT CAP IWR sing 182 n n NAT CAX IWR sing 183 n n CAU CAY IWR sing 184 n n CAU CAX IWR sing 185 n n CAP CAQ IWR doub 186 n y CAP CAO IWR sing 187 n y CAQ CAR IWR sing 188 n y CAZ CAY IWR sing 189 n n CAO CAS IWR doub 190 n y CAR CAN IWR doub 191 n y CAX OBD IWR doub 192 n n OAM CAL IWR doub 193 n n CAS CAN IWR sing 194 n y CAN CAL IWR sing 195 n n CAL NAK IWR sing 196 n n NAK CAE IWR sing 197 n n CAD CAE IWR doub 198 n y CAD CAC IWR sing 199 n y CAE CAF IWR sing 200 n y CAC CAB IWR doub 201 n y CAF NAG IWR doub 202 n y CAF CAA IWR sing 203 n y CAB CAA IWR sing 204 n y NAG CAH IWR sing 205 n y CAA CAJ IWR doub 206 n y CAH CAI IWR doub 207 n y CAJ CAI IWR sing 208 n y CAH H1 IWR sing 209 n n CAI H2 IWR sing 210 n n CAJ H3 IWR sing 211 n n CAB H4 IWR sing 212 n n CAC H5 IWR sing 213 n n CAD H6 IWR sing 214 n n NAK H7 IWR sing 215 n n CAS H8 IWR sing 216 n n CAO H9 IWR sing 217 n n CAR H10 IWR sing 218 n n CAQ H11 IWR sing 219 n n CAV H12 IWR sing 220 n n CBB H13 IWR sing 221 n n CBC H14 IWR sing 222 n n CBC H15 IWR sing 223 n n CBA H17 IWR sing 224 n n CAZ H18 IWR sing 225 n n CAY H20 IWR sing 226 n n CAU H21 IWR sing 227 n n # _atom_sites.entry_id 3UA9 _atom_sites.fract_transf_matrix[1][1] 0.010774 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010664 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008208 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1 1 ZN ZN . D 3 SO4 A 1 1163 1 SO4 SO4 . E 3 SO4 A 1 3 3 SO4 SO4 . F 4 IWR A 1 2 2 IWR IWR . G 5 PEG A 1 1164 1 PEG PEG . H 2 ZN B 1 2 2 ZN ZN . I 3 SO4 B 1 1163 2 SO4 SO4 . J 3 SO4 B 1 4 4 SO4 SO4 . K 4 IWR B 1 1 1 IWR IWR . L 5 PEG B 1 1164 2 PEG PEG . M 6 HOH A 1 5 5 HOH HOH . M 6 HOH A 2 8 8 HOH HOH . M 6 HOH A 3 10 10 HOH HOH . M 6 HOH A 4 13 13 HOH HOH . M 6 HOH A 5 16 16 HOH HOH . M 6 HOH A 6 17 17 HOH HOH . M 6 HOH A 7 18 18 HOH HOH . M 6 HOH A 8 19 19 HOH HOH . M 6 HOH A 9 20 20 HOH HOH . M 6 HOH A 10 24 24 HOH HOH . M 6 HOH A 11 25 25 HOH HOH . M 6 HOH A 12 26 26 HOH HOH . M 6 HOH A 13 28 28 HOH HOH . M 6 HOH A 14 29 29 HOH HOH . M 6 HOH A 15 32 32 HOH HOH . M 6 HOH A 16 33 33 HOH HOH . M 6 HOH A 17 34 34 HOH HOH . M 6 HOH A 18 37 37 HOH HOH . M 6 HOH A 19 41 41 HOH HOH . M 6 HOH A 20 43 43 HOH HOH . M 6 HOH A 21 51 51 HOH HOH . M 6 HOH A 22 52 52 HOH HOH . M 6 HOH A 23 54 54 HOH HOH . M 6 HOH A 24 56 56 HOH HOH . M 6 HOH A 25 57 57 HOH HOH . M 6 HOH A 26 58 58 HOH HOH . M 6 HOH A 27 61 61 HOH HOH . M 6 HOH A 28 64 64 HOH HOH . M 6 HOH A 29 70 70 HOH HOH . M 6 HOH A 30 71 71 HOH HOH . M 6 HOH A 31 72 72 HOH HOH . M 6 HOH A 32 73 73 HOH HOH . M 6 HOH A 33 74 74 HOH HOH . M 6 HOH A 34 76 76 HOH HOH . M 6 HOH A 35 79 79 HOH HOH . M 6 HOH A 36 80 80 HOH HOH . M 6 HOH A 37 81 81 HOH HOH . M 6 HOH A 38 82 82 HOH HOH . M 6 HOH A 39 85 85 HOH HOH . M 6 HOH A 40 87 87 HOH HOH . M 6 HOH A 41 1165 3 HOH HOH . M 6 HOH A 42 1166 2 HOH HOH . N 6 HOH B 1 7 7 HOH HOH . N 6 HOH B 2 9 9 HOH HOH . N 6 HOH B 3 12 12 HOH HOH . N 6 HOH B 4 14 14 HOH HOH . N 6 HOH B 5 15 15 HOH HOH . N 6 HOH B 6 21 21 HOH HOH . N 6 HOH B 7 22 22 HOH HOH . N 6 HOH B 8 23 23 HOH HOH . N 6 HOH B 9 27 27 HOH HOH . N 6 HOH B 10 30 30 HOH HOH . N 6 HOH B 11 31 31 HOH HOH . N 6 HOH B 12 35 35 HOH HOH . N 6 HOH B 13 38 38 HOH HOH . N 6 HOH B 14 39 39 HOH HOH . N 6 HOH B 15 40 40 HOH HOH . N 6 HOH B 16 42 42 HOH HOH . N 6 HOH B 17 44 44 HOH HOH . N 6 HOH B 18 45 45 HOH HOH . N 6 HOH B 19 46 46 HOH HOH . N 6 HOH B 20 47 47 HOH HOH . N 6 HOH B 21 48 48 HOH HOH . N 6 HOH B 22 49 49 HOH HOH . N 6 HOH B 23 50 50 HOH HOH . N 6 HOH B 24 53 53 HOH HOH . N 6 HOH B 25 55 55 HOH HOH . N 6 HOH B 26 59 59 HOH HOH . N 6 HOH B 27 60 60 HOH HOH . N 6 HOH B 28 62 62 HOH HOH . N 6 HOH B 29 63 63 HOH HOH . N 6 HOH B 30 65 65 HOH HOH . N 6 HOH B 31 66 66 HOH HOH . N 6 HOH B 32 67 67 HOH HOH . N 6 HOH B 33 68 68 HOH HOH . N 6 HOH B 34 69 69 HOH HOH . N 6 HOH B 35 77 77 HOH HOH . N 6 HOH B 36 78 78 HOH HOH . N 6 HOH B 37 83 83 HOH HOH . N 6 HOH B 38 86 86 HOH HOH . N 6 HOH B 39 88 88 HOH HOH . N 6 HOH B 40 89 89 HOH HOH . N 6 HOH B 41 1165 1 HOH HOH . N 6 HOH B 42 1166 2 HOH HOH . N 6 HOH B 43 1167 4 HOH HOH . N 6 HOH B 44 1168 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAF IWR . . . F 4 5.936 -1.878 5.326 1 38.94 ? CAF IWR 2 A 1 HETATM 2 N NAG IWR . . . F 4 6.283 -3.061 4.758 1 40.87 ? NAG IWR 2 A 1 HETATM 3 C CAH IWR . . . F 4 6.788 -3.129 3.529 1 42.7 ? CAH IWR 2 A 1 HETATM 4 C CAI IWR . . . F 4 6.999 -1.952 2.792 1 42.68 ? CAI IWR 2 A 1 HETATM 5 C CAJ IWR . . . F 4 6.66 -0.707 3.336 1 40.44 ? CAJ IWR 2 A 1 HETATM 6 C CAA IWR . . . F 4 6.119 -0.67 4.622 1 39.68 ? CAA IWR 2 A 1 HETATM 7 C CAB IWR . . . F 4 5.773 0.545 5.201 1 38.95 ? CAB IWR 2 A 1 HETATM 8 C CAC IWR . . . F 4 5.235 0.579 6.476 1 38.01 ? CAC IWR 2 A 1 HETATM 9 C CAD IWR . . . F 4 5.069 -0.616 7.176 1 36.92 ? CAD IWR 2 A 1 HETATM 10 C CAE IWR . . . F 4 5.427 -1.855 6.623 1 35 ? CAE IWR 2 A 1 HETATM 11 N NAK IWR . . . F 4 5.234 -3.036 7.245 1 32.94 ? NAK IWR 2 A 1 HETATM 12 C CAL IWR . . . F 4 4.489 -3.208 8.347 1 31.86 ? CAL IWR 2 A 1 HETATM 13 O OAM IWR . . . F 4 3.946 -2.305 8.948 1 33.05 ? OAM IWR 2 A 1 HETATM 14 C CAN IWR . . . F 4 4.295 -4.651 8.775 1 33.52 ? CAN IWR 2 A 1 HETATM 15 C CAS IWR . . . F 4 5.373 -5.517 8.817 1 34.94 ? CAS IWR 2 A 1 HETATM 16 C CAO IWR . . . F 4 5.217 -6.856 9.169 1 35.75 ? CAO IWR 2 A 1 HETATM 17 C CAR IWR . . . F 4 3.04 -5.148 9.069 1 34.53 ? CAR IWR 2 A 1 HETATM 18 C CAQ IWR . . . F 4 2.87 -6.487 9.434 1 33.87 ? CAQ IWR 2 A 1 HETATM 19 C CAP IWR . . . F 4 3.958 -7.338 9.489 1 35.66 ? CAP IWR 2 A 1 HETATM 20 N NAT IWR . . . F 4 3.803 -8.611 9.806 1 39.06 ? NAT IWR 2 A 1 HETATM 21 C CAW IWR . . . F 4 3.734 -9.113 11.027 1 37.11 ? CAW IWR 2 A 1 HETATM 22 O OBE IWR . . . F 4 3.798 -8.452 12.044 1 34.99 ? OBE IWR 2 A 1 HETATM 23 C CAV IWR . . . F 4 3.557 -10.614 11.005 1 40.06 ? CAV IWR 2 A 1 HETATM 24 C CBB IWR . . . F 4 4.826 -11.35 11.439 1 42.71 ? CBB IWR 2 A 1 HETATM 25 C CBC IWR . . . F 4 4.638 -12.643 10.65 1 44.09 ? CBC IWR 2 A 1 HETATM 26 C CBA IWR . . . F 4 6.1 -10.82 10.761 1 43.47 ? CBA IWR 2 A 1 HETATM 27 C CAZ IWR . . . F 4 5.975 -11.314 9.315 1 43.65 ? CAZ IWR 2 A 1 HETATM 28 C CAY IWR . . . F 4 4.612 -11.985 9.297 1 43.68 ? CAY IWR 2 A 1 HETATM 29 C CAU IWR . . . F 4 3.487 -10.952 9.52 1 41.49 ? CAU IWR 2 A 1 HETATM 30 C CAX IWR . . . F 4 3.761 -9.59 8.885 1 42.76 ? CAX IWR 2 A 1 HETATM 31 O OBD IWR . . . F 4 3.798 -9.42 7.671 1 45.21 ? OBD IWR 2 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 411 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #