data_3UAX # _model_server_result.job_id CxJPrWWnS0Wjle_x0dC-eA _model_server_result.datetime_utc '2024-11-24 11:30:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3uax # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":238}' # _entry.id 3UAX # _exptl.entry_id 3UAX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3UAX _cell.length_a 122.8 _cell.length_b 122.8 _cell.length_c 68.1 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UAX _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 122.8 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 61.4 106.34792 0 4 'crystal symmetry operation' 10_666 -y+1,-x+1,-z+3/2 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 61.4 106.34792 102.15 5 'crystal symmetry operation' 11_656 -x+y+1,y,-z+3/2 -1 0 0 0 1 0 0 0 -1 122.8 0 102.15 6 'crystal symmetry operation' 12_556 x,x-y,-z+3/2 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 102.15 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3UAX _atom_sites.fract_transf_matrix[1][1] 0.008143 _atom_sites.fract_transf_matrix[1][2] 0.004702 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009403 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014684 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NOS A 1 236 1 NOS NOS . C 3 SO4 A 1 237 1 SO4 SO4 . D 4 GOL A 1 238 1 GOL GOL . E 5 HOH A 1 239 1 HOH HOH . E 5 HOH A 2 240 2 HOH HOH . E 5 HOH A 3 241 3 HOH HOH . E 5 HOH A 4 242 4 HOH HOH . E 5 HOH A 5 243 5 HOH HOH . E 5 HOH A 6 244 6 HOH HOH . E 5 HOH A 7 245 7 HOH HOH . E 5 HOH A 8 246 8 HOH HOH . E 5 HOH A 9 247 9 HOH HOH . E 5 HOH A 10 248 10 HOH HOH . E 5 HOH A 11 249 11 HOH HOH . E 5 HOH A 12 250 12 HOH HOH . E 5 HOH A 13 251 13 HOH HOH . E 5 HOH A 14 252 14 HOH HOH . E 5 HOH A 15 253 15 HOH HOH . E 5 HOH A 16 254 16 HOH HOH . E 5 HOH A 17 255 17 HOH HOH . E 5 HOH A 18 256 18 HOH HOH . E 5 HOH A 19 257 19 HOH HOH . E 5 HOH A 20 258 20 HOH HOH . E 5 HOH A 21 259 21 HOH HOH . E 5 HOH A 22 260 22 HOH HOH . E 5 HOH A 23 261 23 HOH HOH . E 5 HOH A 24 262 24 HOH HOH . E 5 HOH A 25 263 25 HOH HOH . E 5 HOH A 26 264 26 HOH HOH . E 5 HOH A 27 265 27 HOH HOH . E 5 HOH A 28 266 28 HOH HOH . E 5 HOH A 29 267 29 HOH HOH . E 5 HOH A 30 268 30 HOH HOH . E 5 HOH A 31 269 31 HOH HOH . E 5 HOH A 32 270 32 HOH HOH . E 5 HOH A 33 271 33 HOH HOH . E 5 HOH A 34 272 34 HOH HOH . E 5 HOH A 35 273 35 HOH HOH . E 5 HOH A 36 274 36 HOH HOH . E 5 HOH A 37 275 37 HOH HOH . E 5 HOH A 38 276 38 HOH HOH . E 5 HOH A 39 277 39 HOH HOH . E 5 HOH A 40 278 40 HOH HOH . E 5 HOH A 41 279 41 HOH HOH . E 5 HOH A 42 280 42 HOH HOH . E 5 HOH A 43 281 43 HOH HOH . E 5 HOH A 44 282 44 HOH HOH . E 5 HOH A 45 283 45 HOH HOH . E 5 HOH A 46 284 46 HOH HOH . E 5 HOH A 47 285 47 HOH HOH . E 5 HOH A 48 286 48 HOH HOH . E 5 HOH A 49 287 49 HOH HOH . E 5 HOH A 50 288 50 HOH HOH . E 5 HOH A 51 289 51 HOH HOH . E 5 HOH A 52 290 52 HOH HOH . E 5 HOH A 53 291 54 HOH HOH . E 5 HOH A 54 292 55 HOH HOH . E 5 HOH A 55 293 56 HOH HOH . E 5 HOH A 56 294 57 HOH HOH . E 5 HOH A 57 295 58 HOH HOH . E 5 HOH A 58 296 59 HOH HOH . E 5 HOH A 59 297 60 HOH HOH . E 5 HOH A 60 298 61 HOH HOH . E 5 HOH A 61 299 62 HOH HOH . E 5 HOH A 62 300 63 HOH HOH . E 5 HOH A 63 301 64 HOH HOH . E 5 HOH A 64 302 65 HOH HOH . E 5 HOH A 65 303 66 HOH HOH . E 5 HOH A 66 304 67 HOH HOH . E 5 HOH A 67 305 68 HOH HOH . E 5 HOH A 68 306 69 HOH HOH . E 5 HOH A 69 307 70 HOH HOH . E 5 HOH A 70 308 71 HOH HOH . E 5 HOH A 71 309 72 HOH HOH . E 5 HOH A 72 310 73 HOH HOH . E 5 HOH A 73 311 74 HOH HOH . E 5 HOH A 74 312 75 HOH HOH . E 5 HOH A 75 313 76 HOH HOH . E 5 HOH A 76 314 77 HOH HOH . E 5 HOH A 77 315 78 HOH HOH . E 5 HOH A 78 316 79 HOH HOH . E 5 HOH A 79 317 80 HOH HOH . E 5 HOH A 80 318 81 HOH HOH . E 5 HOH A 81 319 82 HOH HOH . E 5 HOH A 82 320 83 HOH HOH . E 5 HOH A 83 321 84 HOH HOH . E 5 HOH A 84 322 85 HOH HOH . E 5 HOH A 85 323 86 HOH HOH . E 5 HOH A 86 324 87 HOH HOH . E 5 HOH A 87 325 88 HOH HOH . E 5 HOH A 88 326 89 HOH HOH . E 5 HOH A 89 327 90 HOH HOH . E 5 HOH A 90 328 91 HOH HOH . E 5 HOH A 91 329 92 HOH HOH . E 5 HOH A 92 330 93 HOH HOH . E 5 HOH A 93 331 94 HOH HOH . E 5 HOH A 94 332 95 HOH HOH . E 5 HOH A 95 333 96 HOH HOH . E 5 HOH A 96 334 97 HOH HOH . E 5 HOH A 97 335 98 HOH HOH . E 5 HOH A 98 336 99 HOH HOH . E 5 HOH A 99 337 100 HOH HOH . E 5 HOH A 100 338 101 HOH HOH . E 5 HOH A 101 339 102 HOH HOH . E 5 HOH A 102 340 103 HOH HOH . E 5 HOH A 103 341 104 HOH HOH . E 5 HOH A 104 342 105 HOH HOH . E 5 HOH A 105 343 106 HOH HOH . E 5 HOH A 106 344 107 HOH HOH . E 5 HOH A 107 345 108 HOH HOH . E 5 HOH A 108 346 109 HOH HOH . E 5 HOH A 109 347 110 HOH HOH . E 5 HOH A 110 348 111 HOH HOH . E 5 HOH A 111 349 112 HOH HOH . E 5 HOH A 112 350 113 HOH HOH . E 5 HOH A 113 351 114 HOH HOH . E 5 HOH A 114 352 115 HOH HOH . E 5 HOH A 115 353 116 HOH HOH . E 5 HOH A 116 354 117 HOH HOH . E 5 HOH A 117 355 118 HOH HOH . E 5 HOH A 118 356 119 HOH HOH . E 5 HOH A 119 357 120 HOH HOH . E 5 HOH A 120 358 121 HOH HOH . E 5 HOH A 121 359 122 HOH HOH . E 5 HOH A 122 360 123 HOH HOH . E 5 HOH A 123 361 124 HOH HOH . E 5 HOH A 124 362 125 HOH HOH . E 5 HOH A 125 363 126 HOH HOH . E 5 HOH A 126 364 127 HOH HOH . E 5 HOH A 127 365 128 HOH HOH . E 5 HOH A 128 366 129 HOH HOH . E 5 HOH A 129 367 130 HOH HOH . E 5 HOH A 130 368 131 HOH HOH . E 5 HOH A 131 369 132 HOH HOH . E 5 HOH A 132 370 133 HOH HOH . E 5 HOH A 133 371 134 HOH HOH . E 5 HOH A 134 372 135 HOH HOH . E 5 HOH A 135 373 136 HOH HOH . E 5 HOH A 136 374 137 HOH HOH . E 5 HOH A 137 375 138 HOH HOH . E 5 HOH A 138 376 139 HOH HOH . E 5 HOH A 139 377 140 HOH HOH . E 5 HOH A 140 378 141 HOH HOH . E 5 HOH A 141 379 142 HOH HOH . E 5 HOH A 142 380 143 HOH HOH . E 5 HOH A 143 381 144 HOH HOH . E 5 HOH A 144 382 145 HOH HOH . E 5 HOH A 145 383 146 HOH HOH . E 5 HOH A 146 384 147 HOH HOH . E 5 HOH A 147 385 148 HOH HOH . E 5 HOH A 148 386 149 HOH HOH . E 5 HOH A 149 387 150 HOH HOH . E 5 HOH A 150 388 151 HOH HOH . E 5 HOH A 151 389 152 HOH HOH . E 5 HOH A 152 390 153 HOH HOH . E 5 HOH A 153 391 154 HOH HOH . E 5 HOH A 154 392 155 HOH HOH . E 5 HOH A 155 393 156 HOH HOH . E 5 HOH A 156 394 157 HOH HOH . E 5 HOH A 157 395 158 HOH HOH . E 5 HOH A 158 396 160 HOH HOH . E 5 HOH A 159 397 161 HOH HOH . E 5 HOH A 160 398 162 HOH HOH . E 5 HOH A 161 399 163 HOH HOH . E 5 HOH A 162 400 164 HOH HOH . E 5 HOH A 163 401 165 HOH HOH . E 5 HOH A 164 402 166 HOH HOH . E 5 HOH A 165 403 167 HOH HOH . E 5 HOH A 166 404 168 HOH HOH . E 5 HOH A 167 405 169 HOH HOH . E 5 HOH A 168 406 170 HOH HOH . E 5 HOH A 169 407 171 HOH HOH . E 5 HOH A 170 408 172 HOH HOH . E 5 HOH A 171 409 173 HOH HOH . E 5 HOH A 172 410 174 HOH HOH . E 5 HOH A 173 411 175 HOH HOH . E 5 HOH A 174 412 176 HOH HOH . E 5 HOH A 175 413 177 HOH HOH . E 5 HOH A 176 414 178 HOH HOH . E 5 HOH A 177 415 179 HOH HOH . E 5 HOH A 178 416 180 HOH HOH . E 5 HOH A 179 417 181 HOH HOH . E 5 HOH A 180 418 182 HOH HOH . E 5 HOH A 181 419 183 HOH HOH . E 5 HOH A 182 420 184 HOH HOH . E 5 HOH A 183 421 185 HOH HOH . E 5 HOH A 184 422 186 HOH HOH . E 5 HOH A 185 423 187 HOH HOH . E 5 HOH A 186 424 188 HOH HOH . E 5 HOH A 187 425 189 HOH HOH . E 5 HOH A 188 426 190 HOH HOH . E 5 HOH A 189 427 191 HOH HOH . E 5 HOH A 190 428 192 HOH HOH . E 5 HOH A 191 429 193 HOH HOH . E 5 HOH A 192 430 194 HOH HOH . E 5 HOH A 193 431 195 HOH HOH . E 5 HOH A 194 432 196 HOH HOH . E 5 HOH A 195 433 197 HOH HOH . E 5 HOH A 196 434 198 HOH HOH . E 5 HOH A 197 435 199 HOH HOH . E 5 HOH A 198 436 200 HOH HOH . E 5 HOH A 199 437 201 HOH HOH . E 5 HOH A 200 438 202 HOH HOH . E 5 HOH A 201 439 203 HOH HOH . E 5 HOH A 202 440 204 HOH HOH . E 5 HOH A 203 441 205 HOH HOH . E 5 HOH A 204 442 206 HOH HOH . E 5 HOH A 205 443 207 HOH HOH . E 5 HOH A 206 444 208 HOH HOH . E 5 HOH A 207 445 209 HOH HOH . E 5 HOH A 208 446 210 HOH HOH . E 5 HOH A 209 447 212 HOH HOH . E 5 HOH A 210 448 213 HOH HOH . E 5 HOH A 211 449 214 HOH HOH . E 5 HOH A 212 450 215 HOH HOH . E 5 HOH A 213 451 216 HOH HOH . E 5 HOH A 214 452 1 HOH HOH . E 5 HOH A 215 453 2 HOH HOH . E 5 HOH A 216 454 5 HOH HOH . E 5 HOH A 217 455 6 HOH HOH . E 5 HOH A 218 456 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . A . D 4 51.856 22.969 61.894 0.49 12.27 ? C1 GOL 238 A 1 HETATM 2 C C1 GOL . B . D 4 52.53 27.672 62.999 0.51 7.46 ? C1 GOL 238 A 1 HETATM 3 O O1 GOL . A . D 4 53.128 22.294 61.766 0.49 9.77 ? O1 GOL 238 A 1 HETATM 4 O O1 GOL . B . D 4 52.463 28.273 61.699 0.51 13.51 ? O1 GOL 238 A 1 HETATM 5 C C2 GOL . A . D 4 52.095 24.32 62.567 0.49 14.25 ? C2 GOL 238 A 1 HETATM 6 C C2 GOL . B . D 4 53.828 26.942 63.133 0.51 14.77 ? C2 GOL 238 A 1 HETATM 7 O O2 GOL . A . D 4 52.597 24.032 63.867 0.49 13.43 ? O2 GOL 238 A 1 HETATM 8 O O2 GOL . B . D 4 53.485 25.581 63.056 0.51 19.23 ? O2 GOL 238 A 1 HETATM 9 C C3 GOL . A . D 4 50.854 25.208 62.706 0.49 14.75 ? C3 GOL 238 A 1 HETATM 10 C C3 GOL . B . D 4 54.303 27.331 64.509 0.51 16.72 ? C3 GOL 238 A 1 HETATM 11 O O3 GOL . A . D 4 51.17 26.457 63.396 0.49 13.48 ? O3 GOL 238 A 1 HETATM 12 O O3 GOL . B . D 4 55.046 26.266 65.086 0.51 16.86 ? O3 GOL 238 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 12 #