data_3UCB # _model_server_result.job_id jpQBHn11pSL2_asvRoRFRw _model_server_result.datetime_utc '2024-11-24 23:28:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ucb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 3UCB # _exptl.entry_id 3UCB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 547.664 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3UCB _cell.length_a 28.64 _cell.length_b 65.667 _cell.length_c 94.032 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UCB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C27 H37 N3 O7 S' _chem_comp.formula_weight 547.664 _chem_comp.id 017 _chem_comp.mon_nstd_flag . _chem_comp.name (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Darunavir;TMC114;UIC-94017 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 017 sing 1 n n N1 H11 017 sing 2 n n N1 H12 017 sing 3 n n C2 C3 017 doub 4 n y C2 C7 017 sing 5 n y C3 C4 017 sing 6 n y C3 H3 017 sing 7 n n C4 C5 017 doub 8 n y C4 H4 017 sing 9 n n C5 C6 017 sing 10 n y C5 S8 017 sing 11 n n C6 C7 017 doub 12 n y C6 H6 017 sing 13 n n C7 H7 017 sing 14 n n S8 O9 017 doub 15 n n S8 O10 017 doub 16 n n S8 N11 017 sing 17 n n N11 C12 017 sing 18 n n N11 C16 017 sing 19 n n C12 C13 017 sing 20 n n C12 H121 017 sing 21 n n C12 H122 017 sing 22 n n C13 C14 017 sing 23 n n C13 C15 017 sing 24 n n C13 H13 017 sing 25 n n C14 H141 017 sing 26 n n C14 H142 017 sing 27 n n C14 H143 017 sing 28 n n C15 H151 017 sing 29 n n C15 H152 017 sing 30 n n C15 H153 017 sing 31 n n C16 C17 017 sing 32 n n C16 H161 017 sing 33 n n C16 H162 017 sing 34 n n C17 O18 017 sing 35 n n C17 C19 017 sing 36 n n C17 H17 017 sing 37 n n O18 H18 017 sing 38 n n C19 N20 017 sing 39 n n C19 C32 017 sing 40 n n C19 H19 017 sing 41 n n N20 C21 017 sing 42 n n N20 H20 017 sing 43 n n C21 O22 017 doub 44 n n C21 O23 017 sing 45 n n O23 C24 017 sing 46 n n C24 C25 017 sing 47 n n C24 C31 017 sing 48 n n C24 H24 017 sing 49 n n C25 O26 017 sing 50 n n C25 H251 017 sing 51 n n C25 H252 017 sing 52 n n O26 C27 017 sing 53 n n C27 O28 017 sing 54 n n C27 C31 017 sing 55 n n C27 H27 017 sing 56 n n O28 C29 017 sing 57 n n C29 C30 017 sing 58 n n C29 H291 017 sing 59 n n C29 H292 017 sing 60 n n C30 C31 017 sing 61 n n C30 H301 017 sing 62 n n C30 H302 017 sing 63 n n C31 H31 017 sing 64 n n C32 C38 017 sing 65 n n C32 H321 017 sing 66 n n C32 H322 017 sing 67 n n C33 C34 017 doub 68 n y C33 C38 017 sing 69 n y C33 H33 017 sing 70 n n C34 C35 017 sing 71 n y C34 H34 017 sing 72 n n C35 C36 017 doub 73 n y C35 H35 017 sing 74 n n C36 C37 017 sing 75 n y C36 H36 017 sing 76 n n C37 C38 017 doub 77 n y C37 H37 017 sing 78 n n # _atom_sites.entry_id 3UCB _atom_sites.fract_transf_matrix[1][1] 0.034916 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015228 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010635 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 017 A 1 201 201 017 017 . D 2 017 B 1 202 202 017 017 . E 3 HOH A 1 1003 1003 HOH HOH . E 3 HOH A 2 1004 1004 HOH HOH . E 3 HOH A 3 1005 1005 HOH HOH . E 3 HOH A 4 1006 1006 HOH HOH . E 3 HOH A 5 1007 1007 HOH HOH . E 3 HOH A 6 1009 1009 HOH HOH . E 3 HOH A 7 1010 1010 HOH HOH . E 3 HOH A 8 1014 1014 HOH HOH . E 3 HOH A 9 1017 1017 HOH HOH . E 3 HOH A 10 1021 1021 HOH HOH . E 3 HOH A 11 1022 1022 HOH HOH . E 3 HOH A 12 1024 1024 HOH HOH . E 3 HOH A 13 1029 1029 HOH HOH . E 3 HOH A 14 1031 1031 HOH HOH . E 3 HOH A 15 1032 1032 HOH HOH . E 3 HOH A 16 1036 1036 HOH HOH . E 3 HOH A 17 1037 1037 HOH HOH . E 3 HOH A 18 1038 1038 HOH HOH . E 3 HOH A 19 1039 1039 HOH HOH . E 3 HOH A 20 1041 1041 HOH HOH . E 3 HOH A 21 1042 1042 HOH HOH . E 3 HOH A 22 1043 1043 HOH HOH . E 3 HOH A 23 1044 1044 HOH HOH . E 3 HOH A 24 1046 1046 HOH HOH . E 3 HOH A 25 1051 1051 HOH HOH . E 3 HOH A 26 1054 1054 HOH HOH . E 3 HOH A 27 1055 1055 HOH HOH . E 3 HOH A 28 1057 1057 HOH HOH . E 3 HOH A 29 1059 1059 HOH HOH . E 3 HOH A 30 1060 1060 HOH HOH . E 3 HOH A 31 1061 1061 HOH HOH . E 3 HOH A 32 1065 1065 HOH HOH . E 3 HOH A 33 1068 1068 HOH HOH . E 3 HOH A 34 1071 1071 HOH HOH . E 3 HOH A 35 1073 1073 HOH HOH . E 3 HOH A 36 1074 1074 HOH HOH . E 3 HOH A 37 1075 1075 HOH HOH . E 3 HOH A 38 1079 1079 HOH HOH . E 3 HOH A 39 1083 1083 HOH HOH . E 3 HOH A 40 1088 1088 HOH HOH . E 3 HOH A 41 1093 1093 HOH HOH . E 3 HOH A 42 1094 1094 HOH HOH . E 3 HOH A 43 1096 1096 HOH HOH . E 3 HOH A 44 1098 1098 HOH HOH . E 3 HOH A 45 1105 1105 HOH HOH . E 3 HOH A 46 1106 1106 HOH HOH . E 3 HOH A 47 1107 1107 HOH HOH . E 3 HOH A 48 1108 1108 HOH HOH . F 3 HOH B 1 1001 1001 HOH HOH . F 3 HOH B 2 1002 1002 HOH HOH . F 3 HOH B 3 1008 1008 HOH HOH . F 3 HOH B 4 1011 1011 HOH HOH . F 3 HOH B 5 1012 1012 HOH HOH . F 3 HOH B 6 1013 1013 HOH HOH . F 3 HOH B 7 1015 1015 HOH HOH . F 3 HOH B 8 1016 1016 HOH HOH . F 3 HOH B 9 1018 1018 HOH HOH . F 3 HOH B 10 1019 1019 HOH HOH . F 3 HOH B 11 1020 1020 HOH HOH . F 3 HOH B 12 1023 1023 HOH HOH . F 3 HOH B 13 1025 1025 HOH HOH . F 3 HOH B 14 1026 1026 HOH HOH . F 3 HOH B 15 1027 1027 HOH HOH . F 3 HOH B 16 1028 1028 HOH HOH . F 3 HOH B 17 1030 1030 HOH HOH . F 3 HOH B 18 1033 1033 HOH HOH . F 3 HOH B 19 1034 1034 HOH HOH . F 3 HOH B 20 1035 1035 HOH HOH . F 3 HOH B 21 1040 1040 HOH HOH . F 3 HOH B 22 1045 1045 HOH HOH . F 3 HOH B 23 1047 1047 HOH HOH . F 3 HOH B 24 1048 1048 HOH HOH . F 3 HOH B 25 1049 1049 HOH HOH . F 3 HOH B 26 1050 1050 HOH HOH . F 3 HOH B 27 1052 1052 HOH HOH . F 3 HOH B 28 1053 1053 HOH HOH . F 3 HOH B 29 1056 1056 HOH HOH . F 3 HOH B 30 1058 1058 HOH HOH . F 3 HOH B 31 1062 1062 HOH HOH . F 3 HOH B 32 1063 1063 HOH HOH . F 3 HOH B 33 1064 1064 HOH HOH . F 3 HOH B 34 1066 1066 HOH HOH . F 3 HOH B 35 1067 1067 HOH HOH . F 3 HOH B 36 1069 1069 HOH HOH . F 3 HOH B 37 1070 1070 HOH HOH . F 3 HOH B 38 1072 1072 HOH HOH . F 3 HOH B 39 1076 1076 HOH HOH . F 3 HOH B 40 1077 1077 HOH HOH . F 3 HOH B 41 1078 1078 HOH HOH . F 3 HOH B 42 1080 1080 HOH HOH . F 3 HOH B 43 1081 1081 HOH HOH . F 3 HOH B 44 1082 1082 HOH HOH . F 3 HOH B 45 1084 1084 HOH HOH . F 3 HOH B 46 1085 1085 HOH HOH . F 3 HOH B 47 1086 1086 HOH HOH . F 3 HOH B 48 1087 1087 HOH HOH . F 3 HOH B 49 1089 1089 HOH HOH . F 3 HOH B 50 1090 1090 HOH HOH . F 3 HOH B 51 1091 1091 HOH HOH . F 3 HOH B 52 1092 1092 HOH HOH . F 3 HOH B 53 1095 1095 HOH HOH . F 3 HOH B 54 1097 1097 HOH HOH . F 3 HOH B 55 1099 1099 HOH HOH . F 3 HOH B 56 1100 1100 HOH HOH . F 3 HOH B 57 1101 1101 HOH HOH . F 3 HOH B 58 1102 1102 HOH HOH . F 3 HOH B 59 1103 1103 HOH HOH . F 3 HOH B 60 1104 1104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 017 . . . D 2 15.776 -19.851 -22.729 0.6 41.97 ? N1 017 202 B 1 HETATM 2 C C2 017 . . . D 2 14.56 -20.118 -23.198 0.6 33.87 ? C2 017 202 B 1 HETATM 3 C C3 017 . . . D 2 13.738 -19.032 -23.481 0.6 34.58 ? C3 017 202 B 1 HETATM 4 C C4 017 . . . D 2 12.464 -19.283 -23.971 0.6 34.03 ? C4 017 202 B 1 HETATM 5 C C5 017 . . . D 2 12.028 -20.585 -24.172 0.6 35.77 ? C5 017 202 B 1 HETATM 6 C C6 017 . . . D 2 12.842 -21.677 -23.893 0.6 30.59 ? C6 017 202 B 1 HETATM 7 C C7 017 . . . D 2 14.122 -21.429 -23.4 0.6 32.97 ? C7 017 202 B 1 HETATM 8 S S8 017 . . . D 2 10.416 -20.837 -24.791 0.6 49.09 ? S8 017 202 B 1 HETATM 9 O O9 017 . . . D 2 10.083 -19.797 -25.813 0.6 53.71 ? O9 017 202 B 1 HETATM 10 O O10 017 . . . D 2 10.325 -22.183 -25.458 0.6 51.39 ? O10 017 202 B 1 HETATM 11 N N11 017 . . . D 2 9.33 -20.715 -23.549 0.6 43.43 ? N11 017 202 B 1 HETATM 12 C C12 017 . . . D 2 9.293 -19.32 -23.074 0.6 46.1 ? C12 017 202 B 1 HETATM 13 C C13 017 . . . D 2 8.019 -18.566 -23.425 0.6 44.24 ? C13 017 202 B 1 HETATM 14 C C14 017 . . . D 2 8.187 -17.071 -23.1 0.6 42.56 ? C14 017 202 B 1 HETATM 15 C C15 017 . . . D 2 6.857 -19.064 -22.561 0.6 56.46 ? C15 017 202 B 1 HETATM 16 C C16 017 . . . D 2 9.721 -21.533 -22.39 0.6 40.27 ? C16 017 202 B 1 HETATM 17 C C17 017 . . . D 2 8.833 -22.743 -22.191 0.6 36.78 ? C17 017 202 B 1 HETATM 18 O O18 017 . . . D 2 9.267 -23.604 -21.141 0.6 34.92 ? O18 017 202 B 1 HETATM 19 C C19 017 . . . D 2 7.349 -22.426 -22.023 0.6 37.22 ? C19 017 202 B 1 HETATM 20 N N20 017 . . . D 2 6.577 -23.581 -22.489 0.6 37.62 ? N20 017 202 B 1 HETATM 21 C C21 017 . . . D 2 5.861 -23.664 -23.602 0.6 35.75 ? C21 017 202 B 1 HETATM 22 O O22 017 . . . D 2 5.874 -22.863 -24.526 0.6 40.32 ? O22 017 202 B 1 HETATM 23 O O23 017 . . . D 2 5.054 -24.761 -23.668 0.6 36.86 ? O23 017 202 B 1 HETATM 24 C C24 017 . . . D 2 4.168 -24.8 -24.777 0.6 42.78 ? C24 017 202 B 1 HETATM 25 C C25 017 . . . D 2 3.799 -26.279 -24.966 0.6 39.95 ? C25 017 202 B 1 HETATM 26 O O26 017 . . . D 2 2.61 -26.434 -24.166 0.6 41.87 ? O26 017 202 B 1 HETATM 27 C C27 017 . . . D 2 1.823 -25.296 -24.562 0.6 44.38 ? C27 017 202 B 1 HETATM 28 O O28 017 . . . D 2 0.872 -24.975 -23.543 0.6 46.24 ? O28 017 202 B 1 HETATM 29 C C29 017 . . . D 2 1.677 -24.491 -22.456 0.6 44.24 ? C29 017 202 B 1 HETATM 30 C C30 017 . . . D 2 2.611 -23.51 -23.164 0.6 43.9 ? C30 017 202 B 1 HETATM 31 C C31 017 . . . D 2 2.825 -24.134 -24.533 0.6 43.86 ? C31 017 202 B 1 HETATM 32 C C32 017 . . . D 2 6.999 -22.21 -20.542 0.6 41.77 ? C32 017 202 B 1 HETATM 33 C C33 017 . . . D 2 4.804 -21.387 -21.48 0.6 46.21 ? C33 017 202 B 1 HETATM 34 C C34 017 . . . D 2 3.659 -20.618 -21.451 0.6 45.58 ? C34 017 202 B 1 HETATM 35 C C35 017 . . . D 2 3.466 -19.779 -20.365 0.6 45.86 ? C35 017 202 B 1 HETATM 36 C C36 017 . . . D 2 4.396 -19.718 -19.343 0.6 45.13 ? C36 017 202 B 1 HETATM 37 C C37 017 . . . D 2 5.544 -20.492 -19.376 0.6 46.43 ? C37 017 202 B 1 HETATM 38 C C38 017 . . . D 2 5.744 -21.334 -20.461 0.6 44.26 ? C38 017 202 B 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 38 #