data_3UCG # _model_server_result.job_id TrAvyLG9lnPgy8WqGoMXvw _model_server_result.datetime_utc '2024-11-04 20:37:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ucg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 3UCG # _exptl.entry_id 3UCG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3UCG _cell.length_a 92.678 _cell.length_b 92.678 _cell.length_c 92.678 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UCG _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_756 -x+2,y,-z+1 -1 0 0 0 1 0 0 0 -1 185.356 0 92.678 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 1 A GLY 0 1_555 A N MSE 2 A MSE 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 A C MSE 2 A MSE 167 1_555 A N GLU 3 A GLU 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3UCG _atom_sites.fract_transf_matrix[1][1] 0.01079 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01079 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01079 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 300 300 SO4 SO4 . C 3 EDO A 1 301 301 EDO EDO . D 3 EDO A 1 302 302 EDO EDO . E 4 PEG A 1 303 303 PEG PEG . F 5 PGE A 1 304 304 PGE PGE . G 6 HOH A 1 305 305 HOH HOH . G 6 HOH A 2 306 306 HOH HOH . G 6 HOH A 3 307 307 HOH HOH . G 6 HOH A 4 308 308 HOH HOH . G 6 HOH A 5 309 309 HOH HOH . G 6 HOH A 6 310 310 HOH HOH . G 6 HOH A 7 311 311 HOH HOH . G 6 HOH A 8 312 312 HOH HOH . G 6 HOH A 9 313 313 HOH HOH . G 6 HOH A 10 314 314 HOH HOH . G 6 HOH A 11 315 315 HOH HOH . G 6 HOH A 12 316 316 HOH HOH . G 6 HOH A 13 317 317 HOH HOH . G 6 HOH A 14 318 318 HOH HOH . G 6 HOH A 15 319 319 HOH HOH . G 6 HOH A 16 320 320 HOH HOH . G 6 HOH A 17 321 321 HOH HOH . G 6 HOH A 18 322 322 HOH HOH . G 6 HOH A 19 323 323 HOH HOH . G 6 HOH A 20 324 324 HOH HOH . G 6 HOH A 21 325 325 HOH HOH . G 6 HOH A 22 326 326 HOH HOH . G 6 HOH A 23 327 327 HOH HOH . G 6 HOH A 24 328 328 HOH HOH . G 6 HOH A 25 329 329 HOH HOH . G 6 HOH A 26 330 330 HOH HOH . G 6 HOH A 27 331 331 HOH HOH . G 6 HOH A 28 332 332 HOH HOH . G 6 HOH A 29 333 333 HOH HOH . G 6 HOH A 30 334 334 HOH HOH . G 6 HOH A 31 335 335 HOH HOH . G 6 HOH A 32 336 336 HOH HOH . G 6 HOH A 33 337 337 HOH HOH . G 6 HOH A 34 338 338 HOH HOH . G 6 HOH A 35 339 339 HOH HOH . G 6 HOH A 36 340 340 HOH HOH . G 6 HOH A 37 341 341 HOH HOH . G 6 HOH A 38 342 342 HOH HOH . G 6 HOH A 39 343 343 HOH HOH . G 6 HOH A 40 344 344 HOH HOH . G 6 HOH A 41 345 345 HOH HOH . G 6 HOH A 42 346 346 HOH HOH . G 6 HOH A 43 347 347 HOH HOH . G 6 HOH A 44 348 348 HOH HOH . G 6 HOH A 45 349 349 HOH HOH . G 6 HOH A 46 350 350 HOH HOH . G 6 HOH A 47 351 351 HOH HOH . G 6 HOH A 48 352 352 HOH HOH . G 6 HOH A 49 353 353 HOH HOH . G 6 HOH A 50 354 354 HOH HOH . G 6 HOH A 51 355 355 HOH HOH . G 6 HOH A 52 356 356 HOH HOH . G 6 HOH A 53 357 357 HOH HOH . G 6 HOH A 54 358 358 HOH HOH . G 6 HOH A 55 359 359 HOH HOH . G 6 HOH A 56 360 360 HOH HOH . G 6 HOH A 57 361 361 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 90.113 83.323 58.287 1 90.61 ? C1 EDO 302 A 1 HETATM 2 O O1 EDO . . . D 3 90.518 83.086 56.918 1 80.33 ? O1 EDO 302 A 1 HETATM 3 C C2 EDO . . . D 3 89.506 82.097 59.001 1 93.01 ? C2 EDO 302 A 1 HETATM 4 O O2 EDO . . . D 3 89.155 80.99 58.136 1 80.38 ? O2 EDO 302 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #