data_3UCL # _model_server_result.job_id jEv5DnOYh9Y0MslwL5w9Vw _model_server_result.datetime_utc '2024-11-30 09:21:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ucl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":541}' # _entry.id 3UCL # _exptl.entry_id 3UCL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3UCL _cell.length_a 55.538 _cell.length_b 67.105 _cell.length_c 131.409 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UCL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 100 n n PA O2A FAD sing 101 n n PA O5B FAD sing 102 n n PA O3P FAD sing 103 n n O2A HOA2 FAD sing 104 n n O5B C5B FAD sing 105 n n C5B C4B FAD sing 106 n n C5B H51A FAD sing 107 n n C5B H52A FAD sing 108 n n C4B O4B FAD sing 109 n n C4B C3B FAD sing 110 n n C4B H4B FAD sing 111 n n O4B C1B FAD sing 112 n n C3B O3B FAD sing 113 n n C3B C2B FAD sing 114 n n C3B H3B FAD sing 115 n n O3B HO3A FAD sing 116 n n C2B O2B FAD sing 117 n n C2B C1B FAD sing 118 n n C2B H2B FAD sing 119 n n O2B HO2A FAD sing 120 n n C1B N9A FAD sing 121 n n C1B H1B FAD sing 122 n n N9A C8A FAD sing 123 n y N9A C4A FAD sing 124 n y C8A N7A FAD doub 125 n y C8A H8A FAD sing 126 n n N7A C5A FAD sing 127 n y C5A C6A FAD sing 128 n y C5A C4A FAD doub 129 n y C6A N6A FAD sing 130 n n C6A N1A FAD doub 131 n y N6A H61A FAD sing 132 n n N6A H62A FAD sing 133 n n N1A C2A FAD sing 134 n y C2A N3A FAD doub 135 n y C2A H2A FAD sing 136 n n N3A C4A FAD sing 137 n y N1 C2 FAD sing 138 n n N1 C10 FAD doub 139 n n C2 O2 FAD doub 140 n n C2 N3 FAD sing 141 n n N3 C4 FAD sing 142 n n N3 HN3 FAD sing 143 n n C4 O4 FAD doub 144 n n C4 C4X FAD sing 145 n n C4X N5 FAD doub 146 n n C4X C10 FAD sing 147 n n N5 C5X FAD sing 148 n n C5X C6 FAD doub 149 n y C5X C9A FAD sing 150 n y C6 C7 FAD sing 151 n y C6 H6 FAD sing 152 n n C7 C7M FAD sing 153 n n C7 C8 FAD doub 154 n y C7M HM71 FAD sing 155 n n C7M HM72 FAD sing 156 n n C7M HM73 FAD sing 157 n n C8 C8M FAD sing 158 n n C8 C9 FAD sing 159 n y C8M HM81 FAD sing 160 n n C8M HM82 FAD sing 161 n n C8M HM83 FAD sing 162 n n C9 C9A FAD doub 163 n y C9 H9 FAD sing 164 n n C9A N10 FAD sing 165 n n N10 C10 FAD sing 166 n n N10 C1' FAD sing 167 n n C1' C2' FAD sing 168 n n C1' "H1'1" FAD sing 169 n n C1' "H1'2" FAD sing 170 n n C2' O2' FAD sing 171 n n C2' C3' FAD sing 172 n n C2' H2' FAD sing 173 n n O2' HO2' FAD sing 174 n n C3' O3' FAD sing 175 n n C3' C4' FAD sing 176 n n C3' H3' FAD sing 177 n n O3' HO3' FAD sing 178 n n C4' O4' FAD sing 179 n n C4' C5' FAD sing 180 n n C4' H4' FAD sing 181 n n O4' HO4' FAD sing 182 n n C5' O5' FAD sing 183 n n C5' "H5'1" FAD sing 184 n n C5' "H5'2" FAD sing 185 n n O5' P FAD sing 186 n n P O1P FAD doub 187 n n P O2P FAD sing 188 n n P O3P FAD sing 189 n n O2P HOP2 FAD sing 190 n n # _atom_sites.entry_id 3UCL _atom_sites.fract_transf_matrix[1][1] 0.018006 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014902 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00761 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 541 541 FAD FAD . C 3 NAP A 1 542 542 NAP NAP . D 4 CYH A 1 543 600 CYH CYH . E 5 HOH A 1 544 1 HOH HOH . E 5 HOH A 2 545 2 HOH HOH . E 5 HOH A 3 546 3 HOH HOH . E 5 HOH A 4 547 4 HOH HOH . E 5 HOH A 5 548 5 HOH HOH . E 5 HOH A 6 549 6 HOH HOH . E 5 HOH A 7 550 7 HOH HOH . E 5 HOH A 8 551 8 HOH HOH . E 5 HOH A 9 552 9 HOH HOH . E 5 HOH A 10 553 10 HOH HOH . E 5 HOH A 11 554 11 HOH HOH . E 5 HOH A 12 555 12 HOH HOH . E 5 HOH A 13 556 13 HOH HOH . E 5 HOH A 14 557 14 HOH HOH . E 5 HOH A 15 558 15 HOH HOH . E 5 HOH A 16 559 16 HOH HOH . E 5 HOH A 17 560 17 HOH HOH . E 5 HOH A 18 561 18 HOH HOH . E 5 HOH A 19 562 19 HOH HOH . E 5 HOH A 20 563 20 HOH HOH . E 5 HOH A 21 564 21 HOH HOH . E 5 HOH A 22 565 22 HOH HOH . E 5 HOH A 23 566 23 HOH HOH . E 5 HOH A 24 567 24 HOH HOH . E 5 HOH A 25 568 25 HOH HOH . E 5 HOH A 26 569 26 HOH HOH . E 5 HOH A 27 570 27 HOH HOH . E 5 HOH A 28 571 28 HOH HOH . E 5 HOH A 29 572 29 HOH HOH . E 5 HOH A 30 573 30 HOH HOH . E 5 HOH A 31 574 31 HOH HOH . E 5 HOH A 32 575 32 HOH HOH . E 5 HOH A 33 576 33 HOH HOH . E 5 HOH A 34 577 34 HOH HOH . E 5 HOH A 35 578 35 HOH HOH . E 5 HOH A 36 579 36 HOH HOH . E 5 HOH A 37 580 37 HOH HOH . E 5 HOH A 38 581 38 HOH HOH . E 5 HOH A 39 582 39 HOH HOH . E 5 HOH A 40 583 40 HOH HOH . E 5 HOH A 41 584 41 HOH HOH . E 5 HOH A 42 585 42 HOH HOH . E 5 HOH A 43 586 43 HOH HOH . E 5 HOH A 44 587 44 HOH HOH . E 5 HOH A 45 588 45 HOH HOH . E 5 HOH A 46 589 46 HOH HOH . E 5 HOH A 47 590 47 HOH HOH . E 5 HOH A 48 591 48 HOH HOH . E 5 HOH A 49 592 49 HOH HOH . E 5 HOH A 50 593 50 HOH HOH . E 5 HOH A 51 594 51 HOH HOH . E 5 HOH A 52 595 52 HOH HOH . E 5 HOH A 53 596 53 HOH HOH . E 5 HOH A 54 597 54 HOH HOH . E 5 HOH A 55 598 55 HOH HOH . E 5 HOH A 56 599 56 HOH HOH . E 5 HOH A 57 600 57 HOH HOH . E 5 HOH A 58 601 58 HOH HOH . E 5 HOH A 59 602 59 HOH HOH . E 5 HOH A 60 603 60 HOH HOH . E 5 HOH A 61 604 61 HOH HOH . E 5 HOH A 62 605 62 HOH HOH . E 5 HOH A 63 606 63 HOH HOH . E 5 HOH A 64 607 64 HOH HOH . E 5 HOH A 65 608 65 HOH HOH . E 5 HOH A 66 609 66 HOH HOH . E 5 HOH A 67 610 67 HOH HOH . E 5 HOH A 68 611 68 HOH HOH . E 5 HOH A 69 612 69 HOH HOH . E 5 HOH A 70 613 70 HOH HOH . E 5 HOH A 71 614 71 HOH HOH . E 5 HOH A 72 615 72 HOH HOH . E 5 HOH A 73 616 73 HOH HOH . E 5 HOH A 74 617 74 HOH HOH . E 5 HOH A 75 618 75 HOH HOH . E 5 HOH A 76 619 76 HOH HOH . E 5 HOH A 77 620 77 HOH HOH . E 5 HOH A 78 621 78 HOH HOH . E 5 HOH A 79 622 79 HOH HOH . E 5 HOH A 80 623 80 HOH HOH . E 5 HOH A 81 624 81 HOH HOH . E 5 HOH A 82 625 82 HOH HOH . E 5 HOH A 83 626 83 HOH HOH . E 5 HOH A 84 627 84 HOH HOH . E 5 HOH A 85 628 85 HOH HOH . E 5 HOH A 86 629 86 HOH HOH . E 5 HOH A 87 630 87 HOH HOH . E 5 HOH A 88 631 88 HOH HOH . E 5 HOH A 89 632 89 HOH HOH . E 5 HOH A 90 633 90 HOH HOH . E 5 HOH A 91 634 91 HOH HOH . E 5 HOH A 92 635 92 HOH HOH . E 5 HOH A 93 636 93 HOH HOH . E 5 HOH A 94 637 94 HOH HOH . E 5 HOH A 95 638 95 HOH HOH . E 5 HOH A 96 639 96 HOH HOH . E 5 HOH A 97 640 97 HOH HOH . E 5 HOH A 98 641 98 HOH HOH . E 5 HOH A 99 642 99 HOH HOH . E 5 HOH A 100 643 100 HOH HOH . E 5 HOH A 101 644 101 HOH HOH . E 5 HOH A 102 645 102 HOH HOH . E 5 HOH A 103 646 103 HOH HOH . E 5 HOH A 104 647 104 HOH HOH . E 5 HOH A 105 648 105 HOH HOH . E 5 HOH A 106 649 106 HOH HOH . E 5 HOH A 107 650 107 HOH HOH . E 5 HOH A 108 651 108 HOH HOH . E 5 HOH A 109 652 109 HOH HOH . E 5 HOH A 110 653 110 HOH HOH . E 5 HOH A 111 654 111 HOH HOH . E 5 HOH A 112 655 112 HOH HOH . E 5 HOH A 113 656 113 HOH HOH . E 5 HOH A 114 657 114 HOH HOH . E 5 HOH A 115 658 115 HOH HOH . E 5 HOH A 116 659 116 HOH HOH . E 5 HOH A 117 660 117 HOH HOH . E 5 HOH A 118 661 118 HOH HOH . E 5 HOH A 119 662 119 HOH HOH . E 5 HOH A 120 663 120 HOH HOH . E 5 HOH A 121 664 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . B 2 10.657 6.337 10.429 1 23.69 ? PA FAD 541 A 1 HETATM 2 O O1A FAD . . . B 2 9.708 5.205 10.35 1 25.56 ? O1A FAD 541 A 1 HETATM 3 O O2A FAD . . . B 2 12.251 5.937 10.282 1 23.8 ? O2A FAD 541 A 1 HETATM 4 O O5B FAD . . . B 2 10.289 7.309 9.228 1 25.28 ? O5B FAD 541 A 1 HETATM 5 C C5B FAD . . . B 2 11.056 8.419 8.965 1 24.96 ? C5B FAD 541 A 1 HETATM 6 C C4B FAD . . . B 2 10.921 8.771 7.514 1 25.62 ? C4B FAD 541 A 1 HETATM 7 O O4B FAD . . . B 2 11.788 9.933 7.349 1 28.05 ? O4B FAD 541 A 1 HETATM 8 C C3B FAD . . . B 2 11.544 7.682 6.633 1 24.11 ? C3B FAD 541 A 1 HETATM 9 O O3B FAD . . . B 2 10.545 7.236 5.75 1 24.18 ? O3B FAD 541 A 1 HETATM 10 C C2B FAD . . . B 2 12.623 8.435 5.871 1 26.4 ? C2B FAD 541 A 1 HETATM 11 O O2B FAD . . . B 2 12.67 8.042 4.499 1 29.46 ? O2B FAD 541 A 1 HETATM 12 C C1B FAD . . . B 2 12.128 9.872 5.981 1 26.09 ? C1B FAD 541 A 1 HETATM 13 N N9A FAD . . . B 2 13.143 10.923 5.778 1 27.38 ? N9A FAD 541 A 1 HETATM 14 C C8A FAD . . . B 2 14.293 11.129 6.447 1 26.47 ? C8A FAD 541 A 1 HETATM 15 N N7A FAD . . . B 2 14.898 12.227 5.959 1 27.67 ? N7A FAD 541 A 1 HETATM 16 C C5A FAD . . . B 2 14.139 12.709 4.964 1 26.76 ? C5A FAD 541 A 1 HETATM 17 C C6A FAD . . . B 2 14.226 13.786 4.074 1 26.99 ? C6A FAD 541 A 1 HETATM 18 N N6A FAD . . . B 2 15.271 14.599 4.086 1 26.92 ? N6A FAD 541 A 1 HETATM 19 N N1A FAD . . . B 2 13.235 14.023 3.186 1 23.97 ? N1A FAD 541 A 1 HETATM 20 C C2A FAD . . . B 2 12.198 13.207 3.134 1 24.59 ? C2A FAD 541 A 1 HETATM 21 N N3A FAD . . . B 2 12.083 12.158 3.935 1 25.93 ? N3A FAD 541 A 1 HETATM 22 C C4A FAD . . . B 2 13.025 11.888 4.861 1 26.86 ? C4A FAD 541 A 1 HETATM 23 N N1 FAD . . . B 2 9.821 0.461 17.889 1 16.19 ? N1 FAD 541 A 1 HETATM 24 C C2 FAD . . . B 2 8.981 0.002 18.886 1 16.27 ? C2 FAD 541 A 1 HETATM 25 O O2 FAD . . . B 2 8.622 0.729 19.81 1 15.73 ? O2 FAD 541 A 1 HETATM 26 N N3 FAD . . . B 2 8.54 -1.294 18.842 1 19.31 ? N3 FAD 541 A 1 HETATM 27 C C4 FAD . . . B 2 8.958 -2.157 17.817 1 21.73 ? C4 FAD 541 A 1 HETATM 28 O O4 FAD . . . B 2 8.528 -3.321 17.794 1 22.38 ? O4 FAD 541 A 1 HETATM 29 C C4X FAD . . . B 2 9.812 -1.689 16.816 1 22.24 ? C4X FAD 541 A 1 HETATM 30 N N5 FAD . . . B 2 10.252 -2.561 15.777 1 22.72 ? N5 FAD 541 A 1 HETATM 31 C C5X FAD . . . B 2 11.267 -2.158 14.878 1 22.54 ? C5X FAD 541 A 1 HETATM 32 C C6 FAD . . . B 2 11.802 -3.076 13.955 1 24.05 ? C6 FAD 541 A 1 HETATM 33 C C7 FAD . . . B 2 12.786 -2.678 13.054 1 26.22 ? C7 FAD 541 A 1 HETATM 34 C C7M FAD . . . B 2 13.365 -3.693 12.036 1 29.51 ? C7M FAD 541 A 1 HETATM 35 C C8 FAD . . . B 2 13.253 -1.36 13.081 1 25.93 ? C8 FAD 541 A 1 HETATM 36 C C8M FAD . . . B 2 14.347 -0.913 12.103 1 25.9 ? C8M FAD 541 A 1 HETATM 37 C C9 FAD . . . B 2 12.73 -0.441 14.001 1 23.46 ? C9 FAD 541 A 1 HETATM 38 C C9A FAD . . . B 2 11.711 -0.83 14.895 1 21.77 ? C9A FAD 541 A 1 HETATM 39 N N10 FAD . . . B 2 11.161 0.099 15.83 1 17.26 ? N10 FAD 541 A 1 HETATM 40 C C10 FAD . . . B 2 10.25 -0.357 16.836 1 19.11 ? C10 FAD 541 A 1 HETATM 41 C C1' FAD . . . B 2 11.649 1.493 15.765 1 14.8 ? C1' FAD 541 A 1 HETATM 42 C C2' FAD . . . B 2 10.835 2.303 14.783 1 15.25 ? C2' FAD 541 A 1 HETATM 43 O O2' FAD . . . B 2 11.74 3.237 14.306 1 15.67 ? O2' FAD 541 A 1 HETATM 44 C C3' FAD . . . B 2 9.679 3.074 15.478 1 16.96 ? C3' FAD 541 A 1 HETATM 45 O O3' FAD . . . B 2 8.804 2.12 16.111 1 12.92 ? O3' FAD 541 A 1 HETATM 46 C C4' FAD . . . B 2 8.831 3.844 14.468 1 18.04 ? C4' FAD 541 A 1 HETATM 47 O O4' FAD . . . B 2 8.349 2.892 13.489 1 22.5 ? O4' FAD 541 A 1 HETATM 48 C C5' FAD . . . B 2 9.582 5.001 13.757 1 18.93 ? C5' FAD 541 A 1 HETATM 49 O O5' FAD . . . B 2 8.662 5.934 13.164 1 16.72 ? O5' FAD 541 A 1 HETATM 50 P P FAD . . . B 2 9.158 7.32 12.713 1 18.07 ? P FAD 541 A 1 HETATM 51 O O1P FAD . . . B 2 8.025 8.021 12.043 1 19.99 ? O1P FAD 541 A 1 HETATM 52 O O2P FAD . . . B 2 9.709 8.169 13.983 1 20.91 ? O2P FAD 541 A 1 HETATM 53 O O3P FAD . . . B 2 10.507 7.169 11.842 1 20.55 ? O3P FAD 541 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #