data_3UD6 # _model_server_result.job_id WuDBZH_tx8e1e_3PDG4i9w _model_server_result.datetime_utc '2024-10-19 09:41:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ud6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 3UD6 # _exptl.entry_id 3UD6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3UD6 _cell.length_a 62.684 _cell.length_b 62.684 _cell.length_c 123.68 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UD6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 159 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 159 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C13 _struct_conn.ptnr2_label_comp_id 3NK _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 3NK _struct_conn.ptnr2_auth_seq_id 300 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.274 _struct_conn.pdbx_value_order doub # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 323 n n S O2 SO4 doub 324 n n S O3 SO4 sing 325 n n S O4 SO4 sing 326 n n # _atom_sites.entry_id 3UD6 _atom_sites.fract_transf_matrix[1][1] 0.015953 _atom_sites.fract_transf_matrix[1][2] 0.00921 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018421 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008085 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3NK A 1 300 159 3NK LYS . C 3 SO4 A 1 401 401 SO4 SO4 . D 3 SO4 A 1 402 402 SO4 SO4 . E 4 HOH A 1 301 301 HOH HOH . E 4 HOH A 2 302 302 HOH HOH . E 4 HOH A 3 305 305 HOH HOH . E 4 HOH A 4 306 306 HOH HOH . E 4 HOH A 5 307 307 HOH HOH . E 4 HOH A 6 308 308 HOH HOH . E 4 HOH A 7 309 309 HOH HOH . E 4 HOH A 8 310 310 HOH HOH . E 4 HOH A 9 311 311 HOH HOH . E 4 HOH A 10 312 312 HOH HOH . E 4 HOH A 11 313 313 HOH HOH . E 4 HOH A 12 314 314 HOH HOH . E 4 HOH A 13 315 315 HOH HOH . E 4 HOH A 14 316 316 HOH HOH . E 4 HOH A 15 317 317 HOH HOH . E 4 HOH A 16 318 318 HOH HOH . E 4 HOH A 17 319 319 HOH HOH . E 4 HOH A 18 320 320 HOH HOH . E 4 HOH A 19 321 321 HOH HOH . E 4 HOH A 20 322 322 HOH HOH . E 4 HOH A 21 323 323 HOH HOH . E 4 HOH A 22 324 324 HOH HOH . E 4 HOH A 23 325 325 HOH HOH . E 4 HOH A 24 326 326 HOH HOH . E 4 HOH A 25 327 327 HOH HOH . E 4 HOH A 26 328 328 HOH HOH . E 4 HOH A 27 329 329 HOH HOH . E 4 HOH A 28 330 330 HOH HOH . E 4 HOH A 29 333 333 HOH HOH . E 4 HOH A 30 334 334 HOH HOH . E 4 HOH A 31 335 335 HOH HOH . E 4 HOH A 32 336 336 HOH HOH . E 4 HOH A 33 337 337 HOH HOH . E 4 HOH A 34 338 338 HOH HOH . E 4 HOH A 35 339 339 HOH HOH . E 4 HOH A 36 341 341 HOH HOH . E 4 HOH A 37 342 342 HOH HOH . E 4 HOH A 38 343 343 HOH HOH . E 4 HOH A 39 344 344 HOH HOH . E 4 HOH A 40 345 345 HOH HOH . E 4 HOH A 41 346 346 HOH HOH . E 4 HOH A 42 347 347 HOH HOH . E 4 HOH A 43 348 348 HOH HOH . E 4 HOH A 44 349 349 HOH HOH . E 4 HOH A 45 351 351 HOH HOH . E 4 HOH A 46 353 353 HOH HOH . E 4 HOH A 47 354 354 HOH HOH . E 4 HOH A 48 355 355 HOH HOH . E 4 HOH A 49 356 356 HOH HOH . E 4 HOH A 50 357 357 HOH HOH . E 4 HOH A 51 359 359 HOH HOH . E 4 HOH A 52 360 360 HOH HOH . E 4 HOH A 53 361 361 HOH HOH . E 4 HOH A 54 363 363 HOH HOH . E 4 HOH A 55 364 364 HOH HOH . E 4 HOH A 56 366 366 HOH HOH . E 4 HOH A 57 367 367 HOH HOH . E 4 HOH A 58 368 368 HOH HOH . E 4 HOH A 59 371 371 HOH HOH . E 4 HOH A 60 372 372 HOH HOH . E 4 HOH A 61 373 373 HOH HOH . E 4 HOH A 62 377 377 HOH HOH . E 4 HOH A 63 381 381 HOH HOH . E 4 HOH A 64 382 382 HOH HOH . E 4 HOH A 65 383 383 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 -12.882 9.894 24.878 1 55.15 ? S SO4 401 A 1 HETATM 2 O O1 SO4 . . . C 3 -11.714 9.053 25.192 1 53.42 ? O1 SO4 401 A 1 HETATM 3 O O2 SO4 . . . C 3 -13.11 10.014 23.432 1 52.44 ? O2 SO4 401 A 1 HETATM 4 O O3 SO4 . . . C 3 -14.04 9.287 25.516 1 55.57 ? O3 SO4 401 A 1 HETATM 5 O O4 SO4 . . . C 3 -12.725 11.257 25.399 1 54.02 ? O4 SO4 401 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #