data_3UDJ
#
_model_server_result.job_id            kDubiSxnKPhjzoL41yTzEw 
_model_server_result.datetime_utc      '2024-11-05 04:33:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3udj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    3UDJ 
#
_exptl.entry_id    3UDJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3UDJ 
_cell.length_a            75.113 
_cell.length_b            104.016 
_cell.length_c            100.847 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3UDJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 159 A CYS 155 1_555 A SG CYS 363 A CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf2 A SG CYS 221 A CYS 217 1_555 A SG CYS 386 A CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf3 A SG CYS 273 A CYS 269 1_555 A SG CYS 323 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
metalc ? metalc1 A ND1 HIS 400 A HIS 396 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? 
metalc ? metalc2 A NE2 HIS 402 A HIS 398 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 117 n n 
C1 C2 EDO sing 118 n n 
C1 H11 EDO sing 119 n n 
C1 H12 EDO sing 120 n n 
O1 HO1 EDO sing 121 n n 
C2 O2 EDO sing 122 n n 
C2 H21 EDO sing 123 n n 
C2 H22 EDO sing 124 n n 
O2 HO2 EDO sing 125 n n 
#
_atom_sites.entry_id                     3UDJ 
_atom_sites.fract_transf_matrix[1][1]    0.013313 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009614 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009916 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 092 A 1 401 399 092 INH . 
C 3 EDO A 1 402 401 EDO PG1 . 
D 3 EDO A 1 403 403 EDO PG1 . 
E 4 PEG A 1 409 409 PEG PG2 . 
F 5 ZN A 1 404 2 ZN ZN . 
G 6 HOH A 1 405 2 HOH HOH . 
G 6 HOH A 2 406 3 HOH HOH . 
G 6 HOH A 3 407 6 HOH HOH . 
G 6 HOH A 4 408 7 HOH HOH . 
G 6 HOH A 5 410 8 HOH HOH . 
G 6 HOH A 6 411 9 HOH HOH . 
G 6 HOH A 7 412 10 HOH HOH . 
G 6 HOH A 8 413 12 HOH HOH . 
G 6 HOH A 9 414 13 HOH HOH . 
G 6 HOH A 10 415 14 HOH HOH . 
G 6 HOH A 11 416 17 HOH HOH . 
G 6 HOH A 12 417 20 HOH HOH . 
G 6 HOH A 13 418 21 HOH HOH . 
G 6 HOH A 14 419 22 HOH HOH . 
G 6 HOH A 15 420 23 HOH HOH . 
G 6 HOH A 16 421 25 HOH HOH . 
G 6 HOH A 17 422 26 HOH HOH . 
G 6 HOH A 18 423 27 HOH HOH . 
G 6 HOH A 19 424 28 HOH HOH . 
G 6 HOH A 20 425 29 HOH HOH . 
G 6 HOH A 21 426 33 HOH HOH . 
G 6 HOH A 22 427 34 HOH HOH . 
G 6 HOH A 23 428 35 HOH HOH . 
G 6 HOH A 24 429 36 HOH HOH . 
G 6 HOH A 25 430 37 HOH HOH . 
G 6 HOH A 26 431 38 HOH HOH . 
G 6 HOH A 27 432 39 HOH HOH . 
G 6 HOH A 28 433 40 HOH HOH . 
G 6 HOH A 29 434 41 HOH HOH . 
G 6 HOH A 30 435 42 HOH HOH . 
G 6 HOH A 31 436 43 HOH HOH . 
G 6 HOH A 32 437 45 HOH HOH . 
G 6 HOH A 33 438 46 HOH HOH . 
G 6 HOH A 34 439 1 HOH HOH . 
G 6 HOH A 35 440 2 HOH HOH . 
G 6 HOH A 36 441 3 HOH HOH . 
G 6 HOH A 37 442 6 HOH HOH . 
G 6 HOH A 38 443 9 HOH HOH . 
G 6 HOH A 39 444 12 HOH HOH . 
G 6 HOH A 40 445 16 HOH HOH . 
G 6 HOH A 41 446 17 HOH HOH . 
G 6 HOH A 42 447 18 HOH HOH . 
G 6 HOH A 43 448 19 HOH HOH . 
G 6 HOH A 44 449 21 HOH HOH . 
G 6 HOH A 45 450 30 HOH HOH . 
G 6 HOH A 46 451 1 HOH HOH . 
G 6 HOH A 47 452 7 HOH HOH . 
G 6 HOH A 48 453 14 HOH HOH . 
G 6 HOH A 49 454 23 HOH HOH . 
G 6 HOH A 50 455 26 HOH HOH . 
G 6 HOH A 51 456 29 HOH HOH . 
G 6 HOH A 52 457 30 HOH HOH . 
G 6 HOH A 53 458 31 HOH HOH . 
G 6 HOH A 54 459 32 HOH HOH . 
G 6 HOH A 55 460 14 HOH HOH . 
G 6 HOH A 56 461 16 HOH HOH . 
G 6 HOH A 57 462 20 HOH HOH . 
G 6 HOH A 58 463 23 HOH HOH . 
G 6 HOH A 59 464 25 HOH HOH . 
G 6 HOH A 60 465 17 HOH HOH . 
G 6 HOH A 61 466 20 HOH HOH . 
G 6 HOH A 62 467 21 HOH HOH . 
G 6 HOH A 63 468 22 HOH HOH . 
G 6 HOH A 64 469 23 HOH HOH . 
G 6 HOH A 65 470 24 HOH HOH . 
G 6 HOH A 66 471 25 HOH HOH . 
G 6 HOH A 67 472 28 HOH HOH . 
G 6 HOH A 68 473 29 HOH HOH . 
G 6 HOH A 69 474 30 HOH HOH . 
G 6 HOH A 70 475 31 HOH HOH . 
G 6 HOH A 71 476 32 HOH HOH . 
G 6 HOH A 72 477 33 HOH HOH . 
G 6 HOH A 73 478 34 HOH HOH . 
G 6 HOH A 74 479 35 HOH HOH . 
G 6 HOH A 75 480 36 HOH HOH . 
G 6 HOH A 76 481 37 HOH HOH . 
G 6 HOH A 77 482 38 HOH HOH . 
G 6 HOH A 78 483 39 HOH HOH . 
G 6 HOH A 79 484 40 HOH HOH . 
G 6 HOH A 80 485 41 HOH HOH . 
G 6 HOH A 81 486 42 HOH HOH . 
G 6 HOH A 82 487 43 HOH HOH . 
G 6 HOH A 83 488 44 HOH HOH . 
G 6 HOH A 84 489 45 HOH HOH . 
G 6 HOH A 85 490 46 HOH HOH . 
G 6 HOH A 86 491 47 HOH HOH . 
G 6 HOH A 87 492 48 HOH HOH . 
G 6 HOH A 88 493 49 HOH HOH . 
G 6 HOH A 89 494 50 HOH HOH . 
G 6 HOH A 90 495 51 HOH HOH . 
G 6 HOH A 91 496 52 HOH HOH . 
G 6 HOH A 92 497 53 HOH HOH . 
G 6 HOH A 93 498 54 HOH HOH . 
G 6 HOH A 94 499 55 HOH HOH . 
G 6 HOH A 95 500 56 HOH HOH . 
G 6 HOH A 96 501 57 HOH HOH . 
G 6 HOH A 97 502 58 HOH HOH . 
G 6 HOH A 98 503 59 HOH HOH . 
G 6 HOH A 99 504 60 HOH HOH . 
G 6 HOH A 100 505 61 HOH HOH . 
G 6 HOH A 101 506 62 HOH HOH . 
G 6 HOH A 102 507 63 HOH HOH . 
G 6 HOH A 103 508 66 HOH HOH . 
G 6 HOH A 104 509 67 HOH HOH . 
G 6 HOH A 105 510 68 HOH HOH . 
G 6 HOH A 106 511 69 HOH HOH . 
G 6 HOH A 107 512 70 HOH HOH . 
G 6 HOH A 108 513 71 HOH HOH . 
G 6 HOH A 109 514 72 HOH HOH . 
G 6 HOH A 110 515 73 HOH HOH . 
G 6 HOH A 111 516 74 HOH HOH . 
G 6 HOH A 112 517 75 HOH HOH . 
G 6 HOH A 113 518 76 HOH HOH . 
G 6 HOH A 114 519 77 HOH HOH . 
G 6 HOH A 115 520 78 HOH HOH . 
G 6 HOH A 116 521 79 HOH HOH . 
G 6 HOH A 117 522 80 HOH HOH . 
G 6 HOH A 118 523 81 HOH HOH . 
G 6 HOH A 119 524 82 HOH HOH . 
G 6 HOH A 120 525 83 HOH HOH . 
G 6 HOH A 121 526 84 HOH HOH . 
G 6 HOH A 122 527 86 HOH HOH . 
G 6 HOH A 123 528 87 HOH HOH . 
G 6 HOH A 124 529 89 HOH HOH . 
G 6 HOH A 125 530 90 HOH HOH . 
G 6 HOH A 126 531 91 HOH HOH . 
G 6 HOH A 127 532 92 HOH HOH . 
G 6 HOH A 128 533 93 HOH HOH . 
G 6 HOH A 129 534 94 HOH HOH . 
G 6 HOH A 130 535 95 HOH HOH . 
G 6 HOH A 131 536 96 HOH HOH . 
G 6 HOH A 132 537 97 HOH HOH . 
G 6 HOH A 133 538 98 HOH HOH . 
G 6 HOH A 134 539 99 HOH HOH . 
G 6 HOH A 135 540 100 HOH HOH . 
G 6 HOH A 136 541 101 HOH HOH . 
G 6 HOH A 137 542 103 HOH HOH . 
G 6 HOH A 138 543 104 HOH HOH . 
G 6 HOH A 139 544 105 HOH HOH . 
G 6 HOH A 140 545 106 HOH HOH . 
G 6 HOH A 141 546 107 HOH HOH . 
G 6 HOH A 142 547 108 HOH HOH . 
G 6 HOH A 143 548 109 HOH HOH . 
G 6 HOH A 144 549 111 HOH HOH . 
G 6 HOH A 145 550 112 HOH HOH . 
G 6 HOH A 146 551 114 HOH HOH . 
G 6 HOH A 147 552 116 HOH HOH . 
G 6 HOH A 148 553 118 HOH HOH . 
G 6 HOH A 149 554 119 HOH HOH . 
G 6 HOH A 150 555 120 HOH HOH . 
G 6 HOH A 151 556 123 HOH HOH . 
G 6 HOH A 152 557 124 HOH HOH . 
G 6 HOH A 153 558 125 HOH HOH . 
G 6 HOH A 154 559 130 HOH HOH . 
G 6 HOH A 155 560 131 HOH HOH . 
G 6 HOH A 156 561 132 HOH HOH . 
G 6 HOH A 157 562 133 HOH HOH . 
G 6 HOH A 158 563 134 HOH HOH . 
G 6 HOH A 159 564 135 HOH HOH . 
G 6 HOH A 160 565 136 HOH HOH . 
G 6 HOH A 161 566 137 HOH HOH . 
G 6 HOH A 162 567 138 HOH HOH . 
G 6 HOH A 163 568 140 HOH HOH . 
G 6 HOH A 164 569 143 HOH HOH . 
G 6 HOH A 165 570 144 HOH HOH . 
G 6 HOH A 166 571 148 HOH HOH . 
G 6 HOH A 167 572 150 HOH HOH . 
G 6 HOH A 168 573 151 HOH HOH . 
G 6 HOH A 169 574 152 HOH HOH . 
G 6 HOH A 170 575 153 HOH HOH . 
G 6 HOH A 171 576 156 HOH HOH . 
G 6 HOH A 172 577 159 HOH HOH . 
G 6 HOH A 173 578 161 HOH HOH . 
G 6 HOH A 174 579 1 HOH HOH . 
G 6 HOH A 175 580 3 HOH HOH . 
G 6 HOH A 176 581 4 HOH HOH . 
G 6 HOH A 177 582 5 HOH HOH . 
G 6 HOH A 178 583 7 HOH HOH . 
G 6 HOH A 179 584 8 HOH HOH . 
G 6 HOH A 180 585 9 HOH HOH . 
G 6 HOH A 181 586 10 HOH HOH . 
G 6 HOH A 182 587 11 HOH HOH . 
G 6 HOH A 183 588 12 HOH HOH . 
G 6 HOH A 184 589 13 HOH HOH . 
G 6 HOH A 185 590 14 HOH HOH . 
G 6 HOH A 186 591 15 HOH HOH . 
G 6 HOH A 187 592 16 HOH HOH . 
G 6 HOH A 188 593 17 HOH HOH . 
G 6 HOH A 189 594 18 HOH HOH . 
G 6 HOH A 190 595 19 HOH HOH . 
G 6 HOH A 191 596 20 HOH HOH . 
G 6 HOH A 192 597 21 HOH HOH . 
G 6 HOH A 193 598 22 HOH HOH . 
G 6 HOH A 194 599 23 HOH HOH . 
G 6 HOH A 195 600 24 HOH HOH . 
G 6 HOH A 196 601 26 HOH HOH . 
G 6 HOH A 197 602 27 HOH HOH . 
G 6 HOH A 198 603 28 HOH HOH . 
G 6 HOH A 199 604 29 HOH HOH . 
G 6 HOH A 200 605 31 HOH HOH . 
G 6 HOH A 201 606 32 HOH HOH . 
G 6 HOH A 202 607 34 HOH HOH . 
G 6 HOH A 203 608 35 HOH HOH . 
G 6 HOH A 204 609 36 HOH HOH . 
G 6 HOH A 205 610 37 HOH HOH . 
G 6 HOH A 206 611 39 HOH HOH . 
G 6 HOH A 207 612 40 HOH HOH . 
G 6 HOH A 208 613 41 HOH HOH . 
G 6 HOH A 209 614 45 HOH HOH . 
G 6 HOH A 210 615 48 HOH HOH . 
G 6 HOH A 211 616 51 HOH HOH . 
G 6 HOH A 212 617 54 HOH HOH . 
G 6 HOH A 213 618 55 HOH HOH . 
G 6 HOH A 214 619 56 HOH HOH . 
G 6 HOH A 215 620 57 HOH HOH . 
G 6 HOH A 216 621 58 HOH HOH . 
G 6 HOH A 217 622 59 HOH HOH . 
G 6 HOH A 218 623 60 HOH HOH . 
G 6 HOH A 219 624 6 HOH HOH . 
G 6 HOH A 220 625 7 HOH HOH . 
G 6 HOH A 221 626 12 HOH HOH . 
G 6 HOH A 222 627 14 HOH HOH . 
G 6 HOH A 223 628 16 HOH HOH . 
G 6 HOH A 224 629 17 HOH HOH . 
G 6 HOH A 225 630 18 HOH HOH . 
G 6 HOH A 226 631 19 HOH HOH . 
G 6 HOH A 227 632 21 HOH HOH . 
G 6 HOH A 228 633 2 HOH HOH . 
G 6 HOH A 229 634 13 HOH HOH . 
G 6 HOH A 230 635 14 HOH HOH . 
G 6 HOH A 231 636 12 HOH HOH . 
G 6 HOH A 232 637 13 HOH HOH . 
G 6 HOH A 233 638 14 HOH HOH . 
G 6 HOH A 234 639 16 HOH HOH . 
G 6 HOH A 235 640 17 HOH HOH . 
G 6 HOH A 236 641 18 HOH HOH . 
G 6 HOH A 237 642 19 HOH HOH . 
G 6 HOH A 238 643 13 HOH HOH . 
G 6 HOH A 239 644 14 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 3 5.076 23.88 51.579 1 44.87 ? C1 EDO 403 A 1 
HETATM 2 O O1 EDO . . . D 3 5.417 24.736 52.667 1 45.33 ? O1 EDO 403 A 1 
HETATM 3 C C2 EDO . . . D 3 3.631 23.409 51.717 1 46.58 ? C2 EDO 403 A 1 
HETATM 4 O O2 EDO . . . D 3 3.494 22.054 51.301 1 50.21 ? O2 EDO 403 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           4 
#