data_3UE6
#
_model_server_result.job_id            gcMQxMtToJK4pK_UqOy-oQ 
_model_server_result.datetime_utc      '2024-11-07 08:40:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ue6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":500}' 
#
_entry.id    3UE6 
#
_exptl.entry_id    3UE6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3UE6 
_cell.length_a            73.987 
_cell.length_b            73.987 
_cell.length_c            177.468 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3UE6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA hexameric 6 software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H,I,O,P 1 1 
C,D,J,K,Q 2 1 
E,F,L,M,N,R,S 3 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 H N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     3UE6 
_atom_sites.fract_transf_matrix[1][1]    0.013516 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013516 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005635 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 FMN A 1 500 500 FMN FMN . 
H 2 FMN B 1 401 500 FMN FMN . 
I 3 PO4 B 1 402 2 PO4 PO4 . 
J 2 FMN C 1 500 500 FMN FMN . 
K 2 FMN D 1 500 500 FMN FMN . 
L 2 FMN E 1 500 500 FMN FMN . 
M 2 FMN F 1 401 500 FMN FMN . 
N 3 PO4 F 1 402 1 PO4 PO4 . 
O 4 HOH A 1 601 1 HOH HOH . 
O 4 HOH A 2 602 22 HOH HOH . 
O 4 HOH A 3 603 56 HOH HOH . 
O 4 HOH A 4 604 58 HOH HOH . 
O 4 HOH A 5 605 59 HOH HOH . 
O 4 HOH A 6 606 88 HOH HOH . 
O 4 HOH A 7 607 89 HOH HOH . 
O 4 HOH A 8 608 90 HOH HOH . 
O 4 HOH A 9 609 91 HOH HOH . 
O 4 HOH A 10 610 92 HOH HOH . 
O 4 HOH A 11 611 93 HOH HOH . 
O 4 HOH A 12 612 114 HOH HOH . 
O 4 HOH A 13 613 121 HOH HOH . 
O 4 HOH A 14 614 123 HOH HOH . 
O 4 HOH A 15 615 124 HOH HOH . 
O 4 HOH A 16 616 125 HOH HOH . 
O 4 HOH A 17 617 126 HOH HOH . 
O 4 HOH A 18 618 127 HOH HOH . 
O 4 HOH A 19 619 128 HOH HOH . 
O 4 HOH A 20 620 129 HOH HOH . 
O 4 HOH A 21 621 130 HOH HOH . 
O 4 HOH A 22 622 131 HOH HOH . 
O 4 HOH A 23 623 117 HOH HOH . 
P 4 HOH B 1 501 33 HOH HOH . 
P 4 HOH B 2 502 84 HOH HOH . 
P 4 HOH B 3 503 85 HOH HOH . 
P 4 HOH B 4 504 86 HOH HOH . 
P 4 HOH B 5 505 87 HOH HOH . 
P 4 HOH B 6 506 94 HOH HOH . 
P 4 HOH B 7 507 95 HOH HOH . 
P 4 HOH B 8 508 96 HOH HOH . 
P 4 HOH B 9 509 97 HOH HOH . 
P 4 HOH B 10 510 98 HOH HOH . 
P 4 HOH B 11 511 99 HOH HOH . 
P 4 HOH B 12 512 100 HOH HOH . 
P 4 HOH B 13 513 101 HOH HOH . 
P 4 HOH B 14 514 102 HOH HOH . 
P 4 HOH B 15 515 103 HOH HOH . 
P 4 HOH B 16 516 122 HOH HOH . 
P 4 HOH B 17 517 132 HOH HOH . 
P 4 HOH B 18 518 133 HOH HOH . 
P 4 HOH B 19 519 1 HOH HOH . 
Q 4 HOH C 1 601 104 HOH HOH . 
R 4 HOH E 1 601 64 HOH HOH . 
R 4 HOH E 2 602 105 HOH HOH . 
R 4 HOH E 3 603 106 HOH HOH . 
R 4 HOH E 4 604 107 HOH HOH . 
R 4 HOH E 5 605 111 HOH HOH . 
R 4 HOH E 6 606 112 HOH HOH . 
R 4 HOH E 7 607 113 HOH HOH . 
R 4 HOH E 8 608 115 HOH HOH . 
R 4 HOH E 9 609 2 HOH HOH . 
S 4 HOH F 1 501 66 HOH HOH . 
S 4 HOH F 2 502 67 HOH HOH . 
S 4 HOH F 3 503 69 HOH HOH . 
S 4 HOH F 4 504 78 HOH HOH . 
S 4 HOH F 5 505 79 HOH HOH . 
S 4 HOH F 6 506 80 HOH HOH . 
S 4 HOH F 7 507 81 HOH HOH . 
S 4 HOH F 8 508 82 HOH HOH . 
S 4 HOH F 9 509 83 HOH HOH . 
S 4 HOH F 10 510 108 HOH HOH . 
S 4 HOH F 11 511 109 HOH HOH . 
S 4 HOH F 12 512 110 HOH HOH . 
S 4 HOH F 13 513 116 HOH HOH . 
S 4 HOH F 14 514 118 HOH HOH . 
S 4 HOH F 15 515 119 HOH HOH . 
S 4 HOH F 16 516 120 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . K 2 -6.433 -41.609 -16.971 1 100.53 ? N1 FMN 500 D 1 
HETATM 2 C C2 FMN . . . K 2 -7.367 -40.642 -17.299 1 100.18 ? C2 FMN 500 D 1 
HETATM 3 O O2 FMN . . . K 2 -7.611 -40.389 -18.478 1 95.12 ? O2 FMN 500 D 1 
HETATM 4 N N3 FMN . . . K 2 -8.031 -39.954 -16.304 1 107.07 ? N3 FMN 500 D 1 
HETATM 5 C C4 FMN . . . K 2 -7.765 -40.229 -14.978 1 103.95 ? C4 FMN 500 D 1 
HETATM 6 O O4 FMN . . . K 2 -8.352 -39.62 -14.086 1 93.27 ? O4 FMN 500 D 1 
HETATM 7 C C4A FMN . . . K 2 -6.828 -41.202 -14.644 1 107.01 ? C4A FMN 500 D 1 
HETATM 8 N N5 FMN . . . K 2 -6.563 -41.478 -13.317 1 104.66 ? N5 FMN 500 D 1 
HETATM 9 C C5A FMN . . . K 2 -5.637 -42.438 -12.975 1 105.15 ? C5A FMN 500 D 1 
HETATM 10 C C6 FMN . . . K 2 -5.377 -42.707 -11.633 1 102.57 ? C6 FMN 500 D 1 
HETATM 11 C C7 FMN . . . K 2 -4.445 -43.673 -11.27 1 97.2 ? C7 FMN 500 D 1 
HETATM 12 C C7M FMN . . . K 2 -4.172 -43.956 -9.822 1 81.49 ? C7M FMN 500 D 1 
HETATM 13 C C8 FMN . . . K 2 -3.77 -44.372 -12.26 1 96.99 ? C8 FMN 500 D 1 
HETATM 14 C C8M FMN . . . K 2 -2.763 -45.415 -11.88 1 85.11 ? C8M FMN 500 D 1 
HETATM 15 C C9 FMN . . . K 2 -4.028 -44.101 -13.603 1 103.97 ? C9 FMN 500 D 1 
HETATM 16 C C9A FMN . . . K 2 -4.965 -43.134 -13.971 1 107.76 ? C9A FMN 500 D 1 
HETATM 17 N N10 FMN . . . K 2 -5.234 -42.87 -15.306 1 109.64 ? N10 FMN 500 D 1 
HETATM 18 C C10 FMN . . . K 2 -6.156 -41.895 -15.646 1 106.72 ? C10 FMN 500 D 1 
HETATM 19 C C1' FMN . . . K 2 -4.501 -43.599 -16.394 1 110.91 ? C1' FMN 500 D 1 
HETATM 20 C C2' FMN . . . K 2 -4.991 -45.019 -16.661 1 117.18 ? C2' FMN 500 D 1 
HETATM 21 O O2' FMN . . . K 2 -5.09 -45.762 -15.463 1 117.9 ? O2' FMN 500 D 1 
HETATM 22 C C3' FMN . . . K 2 -4.009 -45.714 -17.599 1 124.14 ? C3' FMN 500 D 1 
HETATM 23 O O3' FMN . . . K 2 -2.707 -45.669 -17.066 1 123.18 ? O3' FMN 500 D 1 
HETATM 24 C C4' FMN . . . K 2 -4.021 -45.043 -18.962 1 126.06 ? C4' FMN 500 D 1 
HETATM 25 O O4' FMN . . . K 2 -5.268 -45.278 -19.567 1 130.07 ? O4' FMN 500 D 1 
HETATM 26 C C5' FMN . . . K 2 -2.911 -45.548 -19.876 1 127.52 ? C5' FMN 500 D 1 
HETATM 27 O O5' FMN . . . K 2 -2.89 -46.963 -19.879 1 129.16 ? O5' FMN 500 D 1 
HETATM 28 P P FMN . . . K 2 -3.437 -47.791 -21.152 1 137.04 ? P FMN 500 D 1 
HETATM 29 O O1P FMN . . . K 2 -4.937 -47.655 -21.183 1 136.98 ? O1P FMN 500 D 1 
HETATM 30 O O2P FMN . . . K 2 -3.054 -49.243 -21.031 1 135.76 ? O2P FMN 500 D 1 
HETATM 31 O O3P FMN . . . K 2 -2.87 -47.227 -22.431 1 136.75 ? O3P FMN 500 D 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           240 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           31 
#